BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0007.0131.p         (72 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2556 [J] COG0268 Ribosomal protein S20 Rso Ralstonia solanace...   110   8e-25
NMB0463 [J] COG0268 Ribosomal protein S20 Nme Neisseria meningit...    96   3e-20
NMA2022 [J] COG0268 Ribosomal protein S20 NmA Neisseria meningit...    96   3e-20
PA4563 [J] COG0268 Ribosomal protein S20 Pae Pseudomonas aeruginosa    71   5e-13
STM0043 [J] COG0268 Ribosomal protein S20 Sty Salmonella typhimu...    63   2e-10

>RSc2556 [J] COG0268 Ribosomal protein S20 Rso Ralstonia solanacearum
          Length = 88

 Score =  110 bits (275), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 58/72 (80%), Positives = 64/72 (88%)

Query: 1  MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60
          MANTAQARKRARQAV QNAHNS+ RS LRTA+KAVRKAIA GDKAAA +VF+ + STIDS
Sbjct: 1  MANTAQARKRARQAVVQNAHNSALRSRLRTAVKAVRKAIAGGDKAAAANVFKQAQSTIDS 60

Query: 61 IADKKIIHKNXA 72
          IADKKI+HKN A
Sbjct: 61 IADKKIVHKNKA 72


>NMB0463 [J] COG0268 Ribosomal protein S20 Nme Neisseria meningitidis MC58
          Length = 87

 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 48/72 (66%), Positives = 57/72 (79%)

Query: 1  MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60
          MAN+AQARKRARQ+VKQ AHN+S R+  RTA+K V KA+ AGDKAAA +V+Q SV  ID 
Sbjct: 1  MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDKAAAQAVYQESVKVIDR 60

Query: 61 IADKKIIHKNXA 72
          IADK + HKN A
Sbjct: 61 IADKGVFHKNKA 72


>NMA2022 [J] COG0268 Ribosomal protein S20 NmA Neisseria meningitidis
          Z2491
          Length = 87

 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 48/72 (66%), Positives = 57/72 (79%)

Query: 1  MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60
          MAN+AQARKRARQ+VKQ AHN+S R+  RTA+K V KA+ AGDKAAA +V+Q SV  ID 
Sbjct: 1  MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDKAAAQAVYQESVKVIDR 60

Query: 61 IADKKIIHKNXA 72
          IADK + HKN A
Sbjct: 61 IADKGVFHKNKA 72


>PA4563 [J] COG0268 Ribosomal protein S20 Pae Pseudomonas aeruginosa
          Length = 91

 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 50/72 (69%)

Query: 1  MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60
          MANT  A+KRA+QA K+ +HN+S RS +RT IK V KAI A D   A + F ++V  ID 
Sbjct: 1  MANTPSAKKRAKQAEKRRSHNASLRSMVRTYIKNVVKAIDAKDLEKAQAAFTAAVPVIDR 60

Query: 61 IADKKIIHKNXA 72
          +ADK IIHKN A
Sbjct: 61 MADKGIIHKNKA 72


>STM0043 [J] COG0268 Ribosomal protein S20 Sty Salmonella typhimurium LT2
          Length = 87

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 44/72 (61%)

Query: 1  MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60
          MAN   A+KRA Q+ K   HN+S+RS +RT IK V  AI AGDKAAA   F      +D 
Sbjct: 1  MANIKSAKKRAVQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAALKAFNEMQPIVDR 60

Query: 61 IADKKIIHKNXA 72
           A K +IHKN A
Sbjct: 61 QAAKGLIHKNKA 72