BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0103.p (235 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mlr7008 [K] COG2186 Transcriptional regulators Mlo Mesorhizobium... 213 4e-55 SMb20392 [K] COG2186 Transcriptional regulators Sme Sinorhizobiu... 205 7e-53 ZyhcK [K] COG2186 Transcriptional regulators EcZ Escherichia col... 155 9e-38 nanR [K] COG2186 Transcriptional regulators Eco Escherichia coli... 154 1e-37 ECs4099 [K] COG2186 Transcriptional regulators Ecs Escherichia c... 154 2e-37 >mlr7008 [K] COG2186 Transcriptional regulators Mlo Mesorhizobium loti Length = 237 Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 107/228 (46%), Positives = 144/228 (63%) Query: 2 PEPIQRRKLYQEVLERLMARIHQGEFPPGSQLPSERDLMDQYGVGRPAVREALQAMERSG 61 EPI RRKL EV RL I GE PG +PSER+LM+++ VGRPA+REA+QA+ G Sbjct: 4 SEPIVRRKLSDEVFLRLKRLITSGELQPGDDMPSERELMERFEVGRPAIREAMQALSNMG 63 Query: 62 FVEIAHGERARVLDLTARSLIAQIAGGAQHLLRTKPDMLGHLKEARVLLETHTARLAAER 121 V I+HGERA+VL LTA+S+I Q+ G A+ +L + D L HLK AR+ E R AAE+ Sbjct: 64 LVAISHGERAKVLQLTAKSIIKQVDGAAKIILSSSKDTLEHLKTARIFFERGMVREAAEK 123 Query: 122 ATDAQIDRLREIIAAHRASMVNLDQFIERDMAFHREIADISGNPIFPSIVESMFCWAGEF 181 AT + RL+ +A RA+ + + FI DM FH +IA ISGNPI+ ++ E+M W E+ Sbjct: 124 ATVEDVQRLKATVAEQRAARGDSEAFISADMKFHTQIAAISGNPIYVAVSEAMLGWLKEY 183 Query: 182 YTNLVRAPGAEELTLAEHQRIVDAIAAHDGDAAADAMRAHLMRANDLY 229 +T ++ G E+ TL EH+ I+ I D D A AM HL R+ LY Sbjct: 184 HTEMLIWTGKEQFTLTEHEEIIGRIEKKDADGAEKAMIKHLERSRALY 231 >SMb20392 [K] COG2186 Transcriptional regulators Sme Sinorhizobium meliloti Length = 235 Score = 205 bits (521), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 109/232 (46%), Positives = 145/232 (62%) Query: 3 EPIQRRKLYQEVLERLMARIHQGEFPPGSQLPSERDLMDQYGVGRPAVREALQAMERSGF 62 EPI RRKL EV RL A I GE PG ++PSER LM+++ VGRPA+REA+QA+ G Sbjct: 4 EPIIRRKLSDEVFARLKALIETGELQPGDEMPSERMLMERFQVGRPAIREAMQALANMGL 63 Query: 63 VEIAHGERARVLDLTARSLIAQIAGGAQHLLRTKPDMLGHLKEARVLLETHTARLAAERA 122 +EI+HGERA+VL TARSL+ Q+ A+ +L D L HLK AR+ E AR AA RA Sbjct: 64 IEISHGERAKVLQPTARSLLRQVDAAAKIMLAASSDSLEHLKSARIFFERGMAREAASRA 123 Query: 123 TDAQIDRLREIIAAHRASMVNLDQFIERDMAFHREIADISGNPIFPSIVESMFCWAGEFY 182 I L E + +A++ + D FI DMAFH IA ISGNPI+ ++ E+M W E++ Sbjct: 124 DAGDIAALEETLKRQQAALEDSDAFIAADMAFHTRIAQISGNPIYTAVSEAMLGWLKEYH 183 Query: 183 TNLVRAPGAEELTLAEHQRIVDAIAAHDGDAAADAMRAHLMRANDLYRELGQ 234 T ++ G E +TL EH+ I+D I + + D A AM HL R+ LY G+ Sbjct: 184 TEMLIWTGRENVTLTEHEEIIDCIRSGNPDEAEQAMIRHLERSRTLYAPKGR 235 >ZyhcK [K] COG2186 Transcriptional regulators EcZ Escherichia coli O157:H7 EDL933 Length = 263 Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 96/240 (40%), Positives = 137/240 (57%), Gaps = 17/240 (7%) Query: 4 PIQRRKLYQEVLERLMARIHQGEFPPGSQLPSERDLMDQYGVGRPAVREALQAMERSGFV 63 P+ R+KL + V E L I + EF G QLPSER+LM + VGRP+VREAL A++R G V Sbjct: 26 PLARKKLSEMVEEELEQMIRRREFGEGEQLPSERELMAFFNVGRPSVREALAALKRKGLV 85 Query: 64 EIAHGERARVLDLTARSLIAQIAGGAQHLLRTKPDMLGHLKEARVLLETHTARLAAERAT 123 +I +GERARV +A ++I +++G A+ L + P + H ++ R+ E+ R AAE AT Sbjct: 86 QINNGERARVSRPSADTIIGELSGMAKBFL-SHPGGIAHFEQLRLFFESSLVRYAAEHAT 144 Query: 124 DAQIDRLREIIAAHRASMVNLDQFIERDMAFHREIADISGNPIFPSIVESMFCWAGEFYT 183 D QID L + + + S+ N FI D+ FHR +A+I GNPIF +I ++ W Sbjct: 145 DEQIDLLAKALEINSQSLDNNAAFIRSDVDFHRVLAEIPGNPIFMAIHVALLDW------ 198 Query: 184 NLVRA-PGAEELTLAEHQR--------IVDAIAAHDGDAAADAMRAHLMRANDLYRELGQ 234 L+ A P + L EH IVDAI HD D A A+++HL + + GQ Sbjct: 199 -LIAARPTVADQALHEHNNVSYQQHIAIVDAIRRHDPDXADRALQSHLNSVSATWHAFGQ 257 >nanR [K] COG2186 Transcriptional regulators Eco Escherichia coli K12 Length = 263 Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 96/240 (40%), Positives = 137/240 (57%), Gaps = 17/240 (7%) Query: 4 PIQRRKLYQEVLERLMARIHQGEFPPGSQLPSERDLMDQYGVGRPAVREALQAMERSGFV 63 P+ R+KL + V E L I + EF G QLPSER+LM + VGRP+VREAL A++R G V Sbjct: 26 PLARKKLSEMVEEELEQMIRRREFGEGEQLPSERELMAFFNVGRPSVREALAALKRKGLV 85 Query: 64 EIAHGERARVLDLTARSLIAQIAGGAQHLLRTKPDMLGHLKEARVLLETHTARLAAERAT 123 +I +GERARV +A ++I +++G A+ L + P + H ++ R+ E+ R AAE AT Sbjct: 86 QINNGERARVSRPSADTIIGELSGMAKDFL-SHPGGIAHFEQLRLFFESSLVRYAAEHAT 144 Query: 124 DAQIDRLREIIAAHRASMVNLDQFIERDMAFHREIADISGNPIFPSIVESMFCWAGEFYT 183 D QID L + + + S+ N FI D+ FHR +A+I GNPIF +I ++ W Sbjct: 145 DEQIDLLAKALEINSQSLDNNAAFIRSDVDFHRVLAEIPGNPIFMAIHVALLDW------ 198 Query: 184 NLVRA-PGAEELTLAEHQR--------IVDAIAAHDGDAAADAMRAHLMRANDLYRELGQ 234 L+ A P + L EH IVDAI HD D A A+++HL + + GQ Sbjct: 199 -LIAARPTVTDQALHEHNNVSYQQHIAIVDAIRRHDPDEADRALQSHLNSVSATWHAFGQ 257 >ECs4099 [K] COG2186 Transcriptional regulators Ecs Escherichia coli O157:H7 Length = 263 Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 96/240 (40%), Positives = 137/240 (57%), Gaps = 17/240 (7%) Query: 4 PIQRRKLYQEVLERLMARIHQGEFPPGSQLPSERDLMDQYGVGRPAVREALQAMERSGFV 63 P+ R+KL + V E L I + EF G QLPSER+LM + VGRP+VREAL A++R G V Sbjct: 26 PLARKKLSEMVEEELEQMIRRREFGEGEQLPSERELMAFFNVGRPSVREALAALKRKGLV 85 Query: 64 EIAHGERARVLDLTARSLIAQIAGGAQHLLRTKPDMLGHLKEARVLLETHTARLAAERAT 123 +I +GERARV +A ++I +++G A+ L + P + H ++ R+ E+ R AAE AT Sbjct: 86 QINNGERARVSRPSADTIIGELSGMAKDFL-SHPGGIAHFEQLRLFFESSLVRYAAEHAT 144 Query: 124 DAQIDRLREIIAAHRASMVNLDQFIERDMAFHREIADISGNPIFPSIVESMFCWAGEFYT 183 D QID L + + + S+ N FI D+ FHR +A+I GNPIF +I ++ W Sbjct: 145 DEQIDLLAKALEINSQSLDNNAAFIRSDVDFHRVLAEIPGNPIFMAIHVALLDW------ 198 Query: 184 NLVRA-PGAEELTLAEHQR--------IVDAIAAHDGDAAADAMRAHLMRANDLYRELGQ 234 L+ A P + L EH IVDAI HD D A A+++HL + + GQ Sbjct: 199 -LIAARPTVADQALHEHNNVSYQQHIAIVDAIRRHDPDEADRALQSHLNSVSATWHAFGQ 257