BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0076.p (385 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mlr3187 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A s... 220 4e-57 PA4342 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A su... 211 3e-54 BMEII0197 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A... 195 1e-49 PA0202 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A su... 191 2e-48 CAC2977 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A s... 171 3e-42 >mlr3187 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Mlo Mesorhizobium loti Length = 472 Score = 220 bits (561), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 158/389 (40%), Positives = 213/389 (54%), Gaps = 20/389 (5%) Query: 9 TAVELRQLIGSKQVSPVELLDACIARIEDLNPHINAVTATCFERAR--KEARAAEQAVMD 66 +AVEL I K++S E++ A + RIE +NP +NA+ + ER +EA AA+ Sbjct: 11 SAVELAGAIRRKKLSVREVVTAFLDRIETVNPLVNAIV-SLRERGDILREADAAD--ARQ 67 Query: 67 GTELGLLHGLPIGIKDLEETEGLLTTYGSPIYRGNVPAHDNALVARLRAAGAIVAGKTNV 126 +E G L GLPI IKDL T GL T++GSPI+ VP D+ V R+R AGAI+ GKTNV Sbjct: 68 ASETGKLFGLPIAIKDLASTTGLRTSFGSPIFADFVPQEDDFFVERIRNAGAIIIGKTNV 127 Query: 127 PEMGAGANSRNTVWGATGNPFNPLLNAGGSSGGSAAALAVDLLPLCSGSDTGGSLRIPAA 186 PE G G+N+ N V+G T N F+P L AGGSSGG+A ALA+D++P+ GSD GGSLR PA Sbjct: 128 PEFGLGSNTYNNVFGPTLNAFDPALTAGGSSGGAAVALALDMVPVADGSDFGGSLRNPAG 187 Query: 187 KCGVVGFRPSPGLVPSERKL-LGWTPISVVGPMGRNVADTVLQLRATIGLHASDPLSYAV 245 V GFRPS GLVP+ L + + + GPMGRNVAD L L G H PLSY Sbjct: 188 WNNVYGFRPSQGLVPAGPDLEVFHAQMGIEGPMGRNVADMALLLDVQAGYHPQAPLSYEK 247 Query: 246 DDAAFAALPPVDLSRLRIGYTEDF-GVCAVDEGIREVFRQKMAAIGRFVQ---VCEPV-- 299 + L P R+ + D G ++ GI ++ + AA+GRF EP+ Sbjct: 248 PGSFLEGLAPPSTGG-RVAWLGDLGGHLPIEAGILDLCQ---AALGRFSDQSFAVEPLLP 303 Query: 300 EVDMGEAHRAFDVIRAEAFVAGFEAAYRRDPASLGP-NTRANYEMGAAMSLS--DCAWAQ 356 + D +AF +R + + Y DP+ G A +E+ AM L+ A Sbjct: 304 DFDFEALWQAFVTLRQASSGCALKVHY-DDPSRRGMLKPEAIWEIENAMRLTAPQIRAAS 362 Query: 357 GEQTRLFRRFQQLYARYDLILSPTTPVSP 385 +T R ++ R+DLI PT V P Sbjct: 363 VVRTSWHRMLLSIFDRFDLIALPTAQVFP 391 >PA4342 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Pae Pseudomonas aeruginosa Length = 494 Score = 211 bits (536), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 143/392 (36%), Positives = 210/392 (53%), Gaps = 11/392 (2%) Query: 3 DSLVEKTAVELRQLIGSKQVSPVELLDACIARIEDLNPHINAVTATCFE-RARKEARAAE 61 + +V A+ L I +++S E++ A +A+IE NP +NA+ + E R +A + Sbjct: 12 EEIVALDALPLSAAIRRRELSCREVMQAYLAQIERFNPRVNAIVSLQAESRLLTQADERD 71 Query: 62 QAVMDGTELGLLHGLPIGIKDLEETEGLLTTYGSPIYRGNVPAHDNALVARLRAAGAIVA 121 + + G LG +HG+P IKDL T G+ TT GSP++ G VP HD +V R++++GAIV Sbjct: 72 RQLARGEWLGWMHGMPQAIKDLAATSGIPTTLGSPLFAGQVPEHDAIVVERVKSSGAIVI 131 Query: 122 GKTNVPEMGAGANSRNTVWGATGNPFNPLLNAGGSSGGSAAALAVDLLPLCSGSDTGGSL 181 GKTNVPE G G+ + N ++G T N ++P AGGSSGG+A ALA+ +LP+ GSD GSL Sbjct: 132 GKTNVPEFGLGSQTYNPLFGTTRNAYDPARIAGGSSGGAAVALALRMLPVADGSDMMGSL 191 Query: 182 RIPAAKCGVVGFRPSPGLVPS-ERKLLGWTPISVVGPMGRNVADTVLQLRATIGLHASDP 240 R PAA V GFRPS G VP + L ++ GPMGR+VAD L G P Sbjct: 192 RNPAAYNNVYGFRPSQGRVPHGPQAELFVQQLATEGPMGRSVADLARLLATQAGYDPRCP 251 Query: 241 LSYAVDDAAFAALPPVDLSRLRIGYTEDF-GVCAVDEGIREVFRQKM---AAIGRFVQVC 296 LS D FA D R+G+ D+ G ++EG+ E+ + A +G V+ C Sbjct: 252 LSLRDDPRRFADDLGRDFRGARLGWLGDYAGYLPMEEGVLELCEAALGDFAELGCDVEAC 311 Query: 297 EPVEVDMGEAHRAFDVIRAEAFVAGFEAAYRRDPA---SLGPNTRANYEMGAAMSLSDCA 353 P + + R + V R + V G DPA L P + E G + ++ Sbjct: 312 LP-DYPLERLWRTWLVHR-QWLVQGSLGELYADPARRVRLKPEAQWEVESGLGLGAAEVY 369 Query: 354 WAQGEQTRLFRRFQQLYARYDLILSPTTPVSP 385 A +++ +R +L+ RYD +L P+ V P Sbjct: 370 RASLDRSDWYRALARLFERYDFLLLPSAQVFP 401 >BMEII0197 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Bme Brucella melitensis Length = 472 Score = 195 bits (496), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 140/390 (35%), Positives = 205/390 (52%), Gaps = 16/390 (4%) Query: 5 LVEKTAVELRQLIGSKQVSPVELLDACIARIEDLNPHINAVTATCFERARKEARAAEQAV 64 L E +A L ++G +Q SP E++ A + RIE N +NA+ A R+R E A + + Sbjct: 3 LTELSAARLVNMMGKRQTSPSEVMAAHLDRIERHNGAVNAMVAM---RSRDELIAEARLL 59 Query: 65 MDGTELGLLHGLPIGIKDLEETEGLLTTYGSPIYRGNVPAHDNALVARLRAAGAIVAGKT 124 D G LHGLP IKDL T+ + +T+GSPI+ +PA D V+R+R AGA++ GKT Sbjct: 60 DDKPVCGPLHGLPWAIKDLLPTKDIRSTWGSPIHADYIPAEDALAVSRIRKAGAVIMGKT 119 Query: 125 NVPEMGAGANSRNTVWGATGNPFNPLLNAGGSSGGSAAALAVDLLPLCSGSDTGGSLRIP 184 N PE G G++S N V+G T NP++ L+AGGSSGG+AAALA +PL GSD GSLR P Sbjct: 120 NTPEWGHGSHSFNPVYGVTCNPYDTQLSAGGSSGGTAAALAAHFMPLGDGSDMMGSLRNP 179 Query: 185 AAKCGVVGFRPSPGLVPSE--RKLLGWTPISVVGPMGRNVADTVLQLRATIGLHASDPLS 242 A C + G+RPS GLVP+E L T ++ +GPM R++ D VL L ++ P Sbjct: 180 AGFCNIYGYRPSWGLVPNEIGGDLFVHT-MATLGPMARDIEDLVLLLDVLAEPYSLSP-- 236 Query: 243 YAVDDAAFAA-LPPVDLSRLRIGYTEDF-GVCAVDEGIREVFRQKMAAIGRFVQVCEPVE 300 + FA P DL RI + ++ G + GI E + +A + P+E Sbjct: 237 FGQKHTGFATNHAPADLRGKRIAWLGNWGGAYPCEAGILERCEKGLAVLSELGAEIVPLE 296 Query: 301 VDMGEA--HRAFDVIRAEAFVAGFEAAYRRDPAS---LGPNTRANYEMGAAMSLSDCAWA 355 A+ +R+ + G + A P + + P T E GA ++ A Sbjct: 297 PPFSSQALWEAWITLRS-LVIYGSKRALWEKPETRKLIKPETLWEIENGAGLTAQQIMHA 355 Query: 356 QGEQTRLFRRFQQLYARYDLILSPTTPVSP 385 ++ + +L+A YD ++ PT V P Sbjct: 356 SQIRSDWYVSAHRLFAEYDALIMPTAQVWP 385 >PA0202 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Pae Pseudomonas aeruginosa Length = 485 Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 154/393 (39%), Positives = 212/393 (53%), Gaps = 13/393 (3%) Query: 3 DSLVEKTAVELRQLIGSKQVSPVELLDACIARIEDLNPHINAVTATC-FERARKEARAAE 61 + LV A +L + I +QVS E++ A +A IE NP +NA+ + ER +EA A + Sbjct: 8 NELVLLQAHQLAERIRLRQVSCREVMQAYLAHIERFNPRVNALVSLLPAERLLEEADARD 67 Query: 62 QAVMDGTELGLLHGLPIGIKDLEETEGLLTTYGSPIYRGNVPAHDNALVARLRAAGAIVA 121 + G G +HGLP IKDL T G+ TT GSP+YR +P D +V R+RAAGAI+ Sbjct: 68 GELARGEWRGWMHGLPHAIKDLSLTRGIRTTLGSPLYRDYIPERDGIMVERIRAAGAILI 127 Query: 122 GKTNVPEMGAGANSRNTVWGATGNPFNPLLNAGGSSGGSAAALAVDLLPLCSGSDTGGSL 181 GKTN PE G G+ + N ++GAT ++ L+AGGSSGG+AAALA+ L+P+ GSD GSL Sbjct: 128 GKTNTPEFGLGSQTYNPLFGATACAYDERLSAGGSSGGAAAALALHLVPVADGSDMMGSL 187 Query: 182 RIPAAKCGVVGFRPSPGLVPSERKL-LGWTPISVVGPMGRNVADTVLQLRATIGLHASDP 240 R PAA V+GFRPS G VP + L + + GPMGR+V DT L L G P Sbjct: 188 RNPAAFNNVIGFRPSQGRVPFDDSADLFFDQLGYEGPMGRSVRDTALLLSVQAGADRRAP 247 Query: 241 LSYAVDDAAFAALPPVDLSRLRIGYTEDF-GVCAVDEGIREVFRQKMAAIGRFVQV-CEP 298 LS A A FAA D R+G+ D G + +GI ++ ++ A+G F + CE Sbjct: 248 LSIAEPGARFAAPLERDFEGTRLGWLGDLDGYLPMQDGILQMCQR---ALGDFRSLGCEI 304 Query: 299 VEVDMGEA-HRAFDVIRA--EAFVAGFEAAYRRDPAS---LGPNTRANYEMGAAMSLSDC 352 E ++G A R ++ R VAG DPA L P E G + Sbjct: 305 EEANLGFAPERLWECWRTLRHWLVAGSLGGVHADPAKRALLKPEALWEVENGLRLGADAV 364 Query: 353 AWAQGEQTRLFRRFQQLYARYDLILSPTTPVSP 385 A ++ +R +L+ RYD +L P+ V P Sbjct: 365 FRASVIRSDWYRAIGRLFERYDYLLLPSAQVFP 397 >CAC2977 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Cac Clostridium acetobutylicum Length = 478 Score = 171 bits (433), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 125/410 (30%), Positives = 202/410 (49%), Gaps = 32/410 (7%) Query: 5 LVEKTAVELRQLIGSKQVSPVELLDACIARIEDLNPHINAVTATCFERARKEARAAEQAV 64 +++ T +LR I K + +++ A I+ P INA C + A KEA+ ++ + Sbjct: 3 ILDMTVEQLRNAILDKHLKSEDIVKAYFDNIKRNEPEINAYITLCEDYALKEAKDVDKKI 62 Query: 65 MDGTELGLLHGLPIGIKDLEETEGLLTTYGSPIYRGNVPAHDNALVARLRAAGAIVAGKT 124 +G ++G L G+PI IKD T+G+ TT S + VP +D ++ +L+A AI+ GK Sbjct: 63 ANGDKVGRLAGIPIAIKDNICTDGIKTTCASKMLYDFVPPYDATVIKKLKAEDAIIIGKV 122 Query: 125 NVPEMGAGANSRNTVWGATGNPFNPLLNAGGSSGGSAAALAVDLLPLCSGSDTGGSLRIP 184 N+ E G+++ N+ + T NP + GGSSGGSAA +A + P+ GSDTGGS+R P Sbjct: 123 NMDEFAMGSSTENSAFKITKNPRDITRVPGGSSGGSAAVVAAKMAPISLGSDTGGSIRQP 182 Query: 185 AAKCGVVGFRPSPGLVPSERKLLGWTPISVVGPMGRNVADTVLQLRATIGLHASDPLSYA 244 AA CGVVG +P+ GLV + + + +GP+G+ V D L G D S Sbjct: 183 AAFCGVVGLKPTYGLVSRFGLIAFASSLDQIGPLGKTVKDCAELLEVISGEDELDNTSSK 242 Query: 245 VDDAAFAALPPVD--LSRLRIGYTEDFGVCAVDEGIREVFR---QKMAAIGRFVQVCE-- 297 + L +D + ++IG ++F +D IR+ +K+ ++G +VCE Sbjct: 243 KHEKE-DYLEGIDDGIKGMKIGMPKEFLNDGLDPEIRKCIDDTIEKLKSLG--AEVCEMS 299 Query: 298 -PVEVDMGEAHRAFDVIRAEAFVAGFEA---AYR----RDPASLGPNTRANY---EMGAA 346 P+ + A+ A + +A F+ YR D L +R+ E+ Sbjct: 300 LPITEEGLSAYYIISSAEASSNLARFDGIRYGYRPDDFEDVYDLMETSRSEAFGDEVKRR 359 Query: 347 MSLSDCAWAQGEQTRLFRR-----------FQQLYARYDLILSPTTPVSP 385 + L A + G ++R F++ + YDLILSP +PV P Sbjct: 360 IMLGTYALSSGYYDAYYKRALKLKKKIKNEFKEAFENYDLILSPVSPVLP 409