BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0041.p (347 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA4905 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reduc... 181 2e-45 CC2394 Non COG 171 2e-42 RSp0223 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH redu... 147 4e-35 SMa2117_2 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH re... 139 9e-33 yeaX [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reducta... 131 2e-30 >PA4905 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Pae Pseudomonas aeruginosa Length = 317 Score = 181 bits (460), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 112/244 (45%), Positives = 138/244 (56%), Gaps = 16/244 (6%) Query: 1 MKLIVDTVTDETGDIRSFRLVRADGAPLPAYEPGAHIDVTGPTGIMRQYSLCGPLEDRCG 60 +++IV + E DI SF L RADGA LP++EPGAHID+ P G++RQYSLCGP E Sbjct: 2 IEVIVGAIRLEAQDIHSFELFRADGAALPSFEPGAHIDLHLPNGLVRQYSLCGPAERPRH 61 Query: 61 YTIAVKREPASRGGSAALHDAVKPGMELEVGTPRNLFALDAGAQEHLLFGAGIGVTPLLA 120 Y IAV R SRGGSA LH ++ G L +G PRNLF L HLLF GIG+TPLLA Sbjct: 62 YRIAVLRCRDSRGGSATLHAELRVGQRLHIGEPRNLFPLSPEPGPHLLFAGGIGITPLLA 121 Query: 121 MAYRLWAEQKPFTLHYFVRAREHAAFADLLENAPFAAQVRFHYAVMPAQMDHYLTACLEA 180 MA RL + F LHY + E AAF D L FA +V H+ + L A L Sbjct: 122 MAERLARDGADFQLHYCAHSGERAAFVDYLGRCAFADRVHCHFDHGESSRRADLRALLAT 181 Query: 181 GSKEAHVYTCGPAPFMDAVVKCA-----AASRSEDAIHLEHFAAPVAPAASAQGAGGGDG 235 ++A +Y CGPA FM + + A ASR +H EHFAA A++ DG Sbjct: 182 SPRDAQLYLCGPAGFMQWIEESARELGWEASR----LHREHFAAAPRDASA-------DG 230 Query: 236 AFEV 239 FEV Sbjct: 231 TFEV 234 >CC2394 Non COG Length = 316 Score = 171 bits (434), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 104/216 (48%), Positives = 126/216 (58%), Gaps = 6/216 (2%) Query: 15 IRSFRLVRADGAPLPAYEPGAHIDVTGPTGIMRQYSLCGPLEDRCGYTIAVKREPASRGG 74 I LV A+G LPA+E GAHID+ G+ RQYSLC +R Y IAV RE SRGG Sbjct: 16 IAQLDLVCAEGRDLPAFEAGAHIDLFLGNGLTRQYSLCSDPAERSFYRIAVLRELTSRGG 75 Query: 75 SAALHDAVKPGMELEVGTPRNLFALDAGAQEHLLFGAGIGVTPLLAMAYRLWAEQKPFTL 134 SA +H+A+ G LE+ PRNLFALD A+EHLLF G+GVTP+LAMA RL A + FT Sbjct: 76 SAYVHEALTEGATLEISPPRNLFALDETAEEHLLFAGGVGVTPILAMAKRLSALGRAFTF 135 Query: 135 HYFVRAREHAAFADLLENAPFAAQVRFHYAVMP-AQMDHYLTACLEAGSKEAHVYTCGPA 193 HY R R AAF + L APF + VR + P ++D L L +Y CGP Sbjct: 136 HYCARDRSRAAFLNELSTAPFTSAVRLSFDAEPDTRLD--LDVALARPKPGRRLYVCGPG 193 Query: 194 PFMDAVVKCAAASR-SEDAIHLEHFAAPVAPAASAQ 228 FM V+ A A S D I EHFAA AP ++ Q Sbjct: 194 GFMTHVIDGALARGWSGDQIRKEHFAA--APLSAGQ 227 >RSp0223 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Rso Ralstonia solanacearum Length = 317 Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 102/240 (42%), Positives = 128/240 (53%), Gaps = 5/240 (2%) Query: 1 MKLIVDTVTDETGDIRSFRLVRADGAPLPAYEPGAHIDVTGPTGIMRQYSLCGPLEDRCG 60 M++I+ D DI +F L DG LP + GAHIDV G +RQYSLC + Sbjct: 1 MQVILRDKADAAQDIATFELAAPDGGALPPFTAGAHIDVR-VAGFVRQYSLCNSPAETHR 59 Query: 61 YTIAVKREPASRGGSAALHDAVKPGMELEVGTPRNLFALDAGAQEHLLFGAGIGVTPLLA 120 Y I V R+ SRGGS A+H A+ G LE+ P+N FAL GA+ +L GIGVTPLLA Sbjct: 60 YRIGVLRDAQSRGGSVAMH-ALAVGATLEISAPKNHFALVPGARHSILLAGGIGVTPLLA 118 Query: 121 MAYRLWAEQKPFTLHYFVRAREHAAFADLLENAPFAAQVRFHYAVMPAQMDHYLTACLEA 180 MA +L A+ F LHY RA E AF D L A A R ++ PA L A L Sbjct: 119 MAEQLAADGASFALHYAARAPERMAFRDRLAAAHLAPHARCYFDNAPAAERLDLAAVLSR 178 Query: 181 GSKEAHVYTCGPAPFMDAVVKCA-AASRSEDAIHLEHFAAPVAPAASAQGAGGGDGAFEV 239 + H+Y CGPA F++A + A A E +H E+F A AP A G G GAF + Sbjct: 179 PDEGTHLYACGPAGFIEAALAQAHALGWPEANLHREYFGA--APQTPAAGETGDAGAFRI 236 >SMa2117_2 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Sme Sinorhizobium meliloti Length = 312 Score = 139 bits (350), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 86/210 (40%), Positives = 116/210 (55%), Gaps = 7/210 (3%) Query: 11 ETGD-IRSFRLVRADGAPLPAYEPGAHIDVTGPTGIMRQYSLC-GPLEDRCGYTIAVKRE 68 +T D I +F+L G LP ++PGAHIDV P G++RQYSL GP E C +TI VK + Sbjct: 10 QTADGIMAFQLRPVRGL-LPTFQPGAHIDVHLPNGLVRQYSLTNGPGETDC-FTIGVKLD 67 Query: 69 PASRGGSAALHDAVKPGMELEVGTPRNLFALDAGAQEHLLFGAGIGVTPLLAMAYRLWAE 128 PASRGGS LHD+V+ G L + PRN F L A + + GIGVTPLLAMA L + Sbjct: 68 PASRGGSQCLHDSVREGDVLAISEPRNNFPLRRDALKTIFVAGGIGVTPLLAMAQTLNNQ 127 Query: 129 QKPFTLHYFVRAREHAAFADLLENAPFAAQVRFHYAVMPAQMDHYLTACLEAGSKEAHVY 188 + LHYF + + AF++ + V+ H + P L L A + +Y Sbjct: 128 SLDYELHYFAQNEQQLAFSECRQ--ALGDAVKPHLGLSPGDTVKELRRLLSAYLPDTQLY 185 Query: 189 TCGPAPFMDAVVKCAA-ASRSEDAIHLEHF 217 CGP P +++ AA A E A+H E+F Sbjct: 186 VCGPGPMLESTRSLAAEAGWPEAAVHFEYF 215 >yeaX [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Eco Escherichia coli K12 Length = 321 Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 84/212 (39%), Positives = 108/212 (50%), Gaps = 8/212 (3%) Query: 12 TGDIRSFRLVRADGAPLPAYEPGAHIDVT---GPTGIMRQYSLCGPLEDRCGYTIAVKRE 68 T ++ F LV DG PLPA+ G+H+ V G YSL D Y IAV+ E Sbjct: 18 TEQVKRFTLVATDGKPLPAFTGGSHVIVQMSDGDNQYSNAYSLLSSPHDTSCYQIAVRLE 77 Query: 69 PASRGGSAALHDAVKPGMELEVGTPRNLFALDAGAQEHLLFGAGIGVTPLLAMAYRLWAE 128 SRGGS LH VK G L + TP NLFAL A++HL GIG+TP L+ L Sbjct: 78 ENSRGGSRFLHQQVKVGDRLTISTPNNLFALIPSARKHLFIAGGIGITPFLSHMAELQHS 137 Query: 129 QKPFTLHYFVRAREHAAFADLLENAPFAAQVRFHYAVMPAQMD-HYLTACLEAGSKEAHV 187 + LHY R E AF D L P A +V H++ +++ L A +E G+ HV Sbjct: 138 DVDWQLHYCSRNPESCAFRDELVQHPQAEKVHLHHSSTGTRLELARLLADIEPGT---HV 194 Query: 188 YTCGPAPFMDAVVKCAA-ASRSEDAIHLEHFA 218 YTCGP ++AV AA + D +H E FA Sbjct: 195 YTCGPEALIEAVRSEAARLDIAADTLHFEQFA 226