BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0007.0003.p         (187 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA4880 [P] COG2193 Bacterioferritin (cytochrome b1) Pae Pseudomo...   204   1e-52

>PA4880 [P] COG2193 Bacterioferritin (cytochrome b1) Pae Pseudomonas
           aeruginosa
          Length = 177

 Score =  204 bits (518), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 91/158 (57%), Positives = 123/158 (77%)

Query: 28  AAKKIDDGAVTEGYRGNREEVVAMLNDALATELLCVMRYKRHYYTAKGLNVEAIKGEFLA 87
           A K I +GAVTEGY  +R+ V+ +LN+ALATEL+C +RYKRHY+ A GL       EFL 
Sbjct: 16  ARKNIQEGAVTEGYSADRQTVLRLLNEALATELVCFLRYKRHYFMATGLKASIAAAEFLE 75

Query: 88  HAQEEQSHADQIAERIVQLNGEPDFNPKTIAERSHAQYDESEDIKDMIRANLVEERVAIE 147
           HA +E  HADQ+AERI+QL GEPDFNP+ + ERSHA+Y E + +KDM+  NL+ ER+AI+
Sbjct: 76  HANQEMQHADQLAERIMQLGGEPDFNPRGLEERSHAEYVEGKTLKDMVTENLIAERIAID 135

Query: 148 AYRQMIERIGDDDPTTKHLLIQIMAQEEEHADDMSDLL 185
           +YR++I  +G+DDPTT+ +  +I+AQEEEHADDM+D+L
Sbjct: 136 SYREIITYLGNDDPTTRRIFEEILAQEEEHADDMADIL 173