BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0006.0038.p         (208 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1709_1 [S] COG4121 Uncharacterized conserved protein Rso Rals...    78   1e-14
STM2379_1 [S] COG4121 Uncharacterized conserved protein Sty Salm...    66   5e-11
ECs3208_1 [S] COG4121 Uncharacterized conserved protein Ecs Esch...    64   2e-10
Z3587_1 [S] COG4121 Uncharacterized conserved protein EcZ Escher...    64   2e-10
yfcK_1 [S] COG4121 Uncharacterized conserved protein Eco Escheri...    63   4e-10

>RSc1709_1 [S] COG4121 Uncharacterized conserved protein Rso Ralstonia
           solanacearum
          Length = 273

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 10/124 (8%)

Query: 29  QGVPDCLREQRSATVLDLHFGLGQSFFATWHAFARQRAQGEGAVHLHYIAILPHP---PS 85
            G+P   + +RS T+++  FG G +F ATW A+   R   +    L ++++  HP     
Sbjct: 45  NGLPGGWQGKRSFTIVETGFGQGLNFLATWAAW---RDDPQRCGRLDFVSVEKHPFDRAG 101

Query: 86  ADVLHED----LTYAQALRAAWPLPLPGTHRLLLDEGRVTLTLIWGALEEELARLEAPVD 141
             ++H       + A+ALR AWP+P+PG HRL+ D GRVTLTL+ G  E  L +L    D
Sbjct: 102 LALVHAQEGALASLAEALRQAWPVPVPGVHRLVFDAGRVTLTLMLGDAETLLPQLSCAAD 161

Query: 142 LFYL 145
            FYL
Sbjct: 162 AFYL 165


>STM2379_1 [S] COG4121 Uncharacterized conserved protein Sty Salmonella
           typhimurium LT2
          Length = 275

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/103 (40%), Positives = 56/103 (54%), Gaps = 9/103 (8%)

Query: 48  FGLGQSFFATWHAFARQRAQGEGAV--HLHYIAILPHPPSADVLH-------EDLTYAQA 98
           FG G +F   W AF   R+    A    LH+I+    P + D L        E   +A+ 
Sbjct: 87  FGTGLNFLTLWQAFDSFRSAHPQATLQRLHFISFEKFPLTRDDLALAHQHWPELAPWAEQ 146

Query: 99  LRAAWPLPLPGTHRLLLDEGRVTLTLIWGALEEELARLEAPVD 141
           L+A WPLPLPG HRLLLD GRVTL L +G + E   +L+A ++
Sbjct: 147 LQAQWPLPLPGCHRLLLDRGRVTLDLWFGDINELTDQLDATLN 189


>ECs3208_1 [S] COG4121 Uncharacterized conserved protein Ecs Escherichia coli
           O157:H7
          Length = 277

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 9/103 (8%)

Query: 48  FGLGQSFFATWHAFARQRAQGEGAV--HLHYIAILPHPPSADVLH-------EDLTYAQA 98
           FG G +F   W AF + R     A    LH+I+    P +   L        E   +A+ 
Sbjct: 87  FGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQ 146

Query: 99  LRAAWPLPLPGTHRLLLDEGRVTLTLIWGALEEELARLEAPVD 141
           L+A WP+PLPG HRLLLDEGRVTL L +G + E +++L+  ++
Sbjct: 147 LQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELISQLDDSLN 189


>Z3587_1 [S] COG4121 Uncharacterized conserved protein EcZ Escherichia coli
           O157:H7 EDL933
          Length = 275

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 9/103 (8%)

Query: 48  FGLGQSFFATWHAFARQRAQGEGAV--HLHYIAILPHPPSADVLH-------EDLTYAQA 98
           FG G +F   W AF + R     A    LH+I+    P +   L        E   +A+ 
Sbjct: 87  FGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQ 146

Query: 99  LRAAWPLPLPGTHRLLLDEGRVTLTLIWGALEEELARLEAPVD 141
           L+A WP+PLPG HRLLLDEGRVTL L +G + E +++L+  ++
Sbjct: 147 LQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELISQLDDSLN 189


>yfcK_1 [S] COG4121 Uncharacterized conserved protein Eco Escherichia coli
           K12
          Length = 275

 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 9/103 (8%)

Query: 48  FGLGQSFFATWHAFARQRAQGEGAV--HLHYIAILPHPPSADVLH-------EDLTYAQA 98
           FG G +F   W AF + R     A    LH+I+    P +   L        E   +A+ 
Sbjct: 87  FGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQ 146

Query: 99  LRAAWPLPLPGTHRLLLDEGRVTLTLIWGALEEELARLEAPVD 141
           L+A WP+PLPG HRLLLDEGRVTL L +G + E  ++L+  ++
Sbjct: 147 LQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELTSQLDDSLN 189