BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0006.0032.p         (189 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1605 Non COG                                                       162   5e-40
RSc0025 Non COG                                                        89   6e-18
RSc1972 Non COG                                                        74   2e-13

>RSc1605 Non COG
          Length = 193

 Score =  162 bits (409), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 91/163 (55%), Positives = 112/163 (68%), Gaps = 4/163 (2%)

Query: 5   QDQFSAATKANLQAHLDLINNLTAKAFEGVEKIVELNLSATKATLEEATAAAKQLAAAKD 64
           Q+Q +AA KANL+    L N    KAFEGVEK+VELNL   KATL E    +K+  +AKD
Sbjct: 4   QEQIAAAQKANLETFFGLTN----KAFEGVEKLVELNLQVVKATLAENVEHSKKALSAKD 59

Query: 65  PQELLSLAAAQAQPGAEKATAYSRHLAGIVSSTQAEFTKAAEAQISETSRKLSALIDEIS 124
            QELL++  A  QP AEK  AY+RHL  I S TQ EF K AE QI+E SRKL ALID +S
Sbjct: 60  AQELLAVHTAAVQPLAEKVLAYNRHLYEIFSDTQTEFGKVAETQIAEGSRKLQALIDNVS 119

Query: 125 KNAPPGSEQAVSILKATLTNANAAYEQLSKNSKQAVETLEANL 167
           KNAP GSE AV+++K+ L+ AN AY+ + K +KQAVE  E+N 
Sbjct: 120 KNAPAGSESAVALVKSALSAANNAYDSVQKATKQAVELAESNF 162


>RSc0025 Non COG
          Length = 173

 Score = 88.6 bits (218), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 79/145 (54%), Gaps = 1/145 (0%)

Query: 20  LDLINNLTAKAFEGVEKIVELNLSATKATLEEATAAAKQLAAAKDPQELLSLAAAQAQPG 79
           LD +  LT  A   VEK+ EL     +A+LE++T   K++  A+   EL +L +  +QP 
Sbjct: 15  LDALAELTGAALNSVEKLSELQFQTVRASLEDSTEQGKRVFDARSLHELTALQSEVSQP- 73

Query: 80  AEKATAYSRHLAGIVSSTQAEFTKAAEAQISETSRKLSALIDEISKNAPPGSEQAVSILK 139
            EK  AY RHL  I + T AE+ K A+ + +E  R   A +D+ +K A PGSE A+S ++
Sbjct: 74  TEKLVAYGRHLYQIAAGTHAEWRKVAQTRANEQCRIALAWVDDYAKQAVPGSEPAISFMR 133

Query: 140 ATLTNANAAYEQLSKNSKQAVETLE 164
            T+T    A +     S  A+  ++
Sbjct: 134 TTITATQRACDAWQDASAHAIHLMD 158


>RSc1972 Non COG
          Length = 163

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 4/135 (2%)

Query: 6   DQFSAATKANLQAHLDLINNLTAKAFEGVEKIVELNLSATKATLEEATAAAKQLAAAKDP 65
           +Q     +A L+A L     +T +A +G+ +++ LNL A KA L E      ++A A+D 
Sbjct: 5   EQLGFLHRAQLEAWL----AVTKEAVDGINRVIGLNLQALKAGLGETEQCLHEVAGAQDA 60

Query: 66  QELLSLAAAQAQPGAEKATAYSRHLAGIVSSTQAEFTKAAEAQISETSRKLSALIDEISK 125
            +  +      QP  E+ + Y+R+L  I   TQ    +A +    E  R   A+ + +  
Sbjct: 61  GQWFTAHVRYLQPAGERVSGYTRNLVEIGVQTQNGIAQALQRHGDEVRRHWGAVTENLVD 120

Query: 126 NAPPGSEQAVSILKA 140
           +APPGSE  VS++KA
Sbjct: 121 SAPPGSEAVVSLMKA 135