BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0006.0027.p         (39 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA2325 [I] COG1960 Acyl-CoA dehydrogenases Pae Pseudomonas aerug...    64   8e-11
PA2347 [I] COG1960 Acyl-CoA dehydrogenases Pae Pseudomonas aerug...    61   6e-10

>PA2325 [I] COG1960 Acyl-CoA dehydrogenases Pae Pseudomonas aeruginosa
          Length = 411

 Score = 63.9 bits (154), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/29 (89%), Positives = 26/29 (89%)

Query: 9   THTLHDPVRWKYHAIGNYVLNGKKPPRHG 37
           THTLHDPVRWKYHAIGNY LNG KPPRH 
Sbjct: 381 THTLHDPVRWKYHAIGNYQLNGVKPPRHA 409


>PA2347 [I] COG1960 Acyl-CoA dehydrogenases Pae Pseudomonas aeruginosa
          Length = 405

 Score = 60.8 bits (146), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 22/30 (73%), Positives = 26/30 (86%)

Query: 10  HTLHDPVRWKYHAIGNYVLNGKKPPRHGAI 39
           HTLHDPVRWKYHA+G+Y LNG+ PPR G +
Sbjct: 376 HTLHDPVRWKYHAVGDYYLNGRLPPRRGTL 405