BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0006.0013.p (257 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BH0172 [E] COG1126 ABC-type polar amino acid transport system, A... 284 1e-76 CAC3327 [E] COG1126 ABC-type polar amino acid transport system, ... 279 4e-75 CAC3618 [E] COG1126 ABC-type polar amino acid transport system, ... 277 1e-74 BS_yckI [E] COG1126 ABC-type polar amino acid transport system, ... 277 2e-74 Cgl1298 [E] COG1126 ABC-type polar amino acid transport system, ... 277 2e-74 >BH0172 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Bha Bacillus halodurans Length = 247 Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 140/244 (57%), Positives = 180/244 (73%), Gaps = 4/244 (1%) Query: 9 MIQISNLKKAFGEHVVLKDISIAVPRGSVVAMIGPSGSGKSTLLRCLNLLTVPDLGTVRI 68 MI + +L K FGE VLK + + V RG VV +IGPSGSGK+TLLRCLN+L P G+V+I Sbjct: 1 MIAVQSLYKKFGEVEVLKGLDLTVERGKVVVVIGPSGSGKTTLLRCLNILETPTSGSVQI 60 Query: 69 GERHFEFNGRKSRLPKDRELAAFRARTGMVFQHFNLFPHMTAVENVMEGMVTVLRTPKAE 128 + +F+G+ S +E+A FR TGMVFQ +NLFPHMT ++NVMEG +TV + KA+ Sbjct: 61 ENQTLDFSGKVS----SKEIANFRRLTGMVFQSYNLFPHMTVLQNVMEGPMTVKKEAKAQ 116 Query: 129 ARAKAMALLQKVGLSDRADMYPQKLSGGQKQRIAIARALAMQPDVMLFDEATSALDPELV 188 KA LL KVGL+D+ +YP +LSGGQ+QR+ IARALAM+P VMLFDE TSALDPELV Sbjct: 117 VEEKAKQLLAKVGLADKETVYPFQLSGGQQQRVGIARALAMEPKVMLFDEPTSALDPELV 176 Query: 189 GEVLNVIRGLAADGMTMILVTHEIAFAREVADQVVFMRDGVVVEAGPPSQVIDNPREAAT 248 GEVL V++ LA +GMTMI+VTHE+ FA+EVAD+V+FM DG +VE G P + P+ T Sbjct: 177 GEVLRVMKELAEEGMTMIVVTHEMRFAQEVADEVIFMDDGKIVERGTPDDIFKTPKVERT 236 Query: 249 QAFL 252 + FL Sbjct: 237 KQFL 240 >CAC3327 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Cac Clostridium acetobutylicum Length = 247 Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 131/239 (54%), Positives = 176/239 (73%), Gaps = 5/239 (2%) Query: 9 MIQISNLKKAFGEHVVLKDISIAVPRGSVVAMIGPSGSGKSTLLRCLNLLTVPDLGTVRI 68 MI ISNL K+FG +LK I + V +G +IGPSGSGK+TLLRC+NLL P+ G++ + Sbjct: 1 MITISNLHKSFGNTEILKGIDLNVNKGETTVIIGPSGSGKTTLLRCINLLETPNKGSITV 60 Query: 69 GERHFEFNGRKSRLPKDRELAAFRARTGMVFQHFNLFPHMTAVENVMEGMVTVLRTPKAE 128 G +F+ S D + R +TGMVFQ FNLFPHMT ++N+MEG VTVL+ K+E Sbjct: 61 GNSSIDFDNNNSFYTSD--VINLRKKTGMVFQSFNLFPHMTVLQNIMEGQVTVLKRSKSE 118 Query: 129 ARAKAMALLQKVGLSDRADMYPQKLSGGQKQRIAIARALAMQPDVMLFDEATSALDPELV 188 AR KA+ LL+KVGLS++ D YP +LSGGQ+QR+AIARA+AM P+V+LFDE TSALDPEL Sbjct: 119 ARKKALLLLEKVGLSEKQDQYPHELSGGQQQRVAIARAMAMDPEVLLFDEPTSALDPELE 178 Query: 189 GEVLNVIRGLAADGMTMILVTHEIAFAREVADQVVFMRDGVVVEAGPPSQVI---DNPR 244 EVL V++ L+ +GMTMI+VTH+++FA++ A +V+FM +G ++EAG P V NPR Sbjct: 179 AEVLKVMKELSNEGMTMIVVTHKMSFAKDAAHRVIFMDNGTIIEAGTPEHVFTASTNPR 237 >CAC3618 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Cac Clostridium acetobutylicum Length = 243 Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 137/247 (55%), Positives = 177/247 (71%), Gaps = 7/247 (2%) Query: 9 MIQISNLKKAFGEHVVLKDISIAVPRGSVVAMIGPSGSGKSTLLRCLNLLTVPDLGTVRI 68 MI+ NL K FG+ V +D+++ + +G V+ +IGPSGSGKST LRCLN L P+ G V I Sbjct: 3 MIEAKNLTKTFGKLTVFEDLNVNISKGEVLVIIGPSGSGKSTFLRCLNHLEEPNGGQVII 62 Query: 69 GERHFEFNGRKSRLPKDRELAAFRARTGMVFQHFNLFPHMTAVENVMEGMVTVLRTPKAE 128 +K K RE+ +TGMVFQ +NLFPHMT ++NVME +TV + K+E Sbjct: 63 EGEVLNHKDKK----KYREIIE---KTGMVFQSYNLFPHMTVLQNVMEAPITVKKENKSE 115 Query: 129 ARAKAMALLQKVGLSDRADMYPQKLSGGQKQRIAIARALAMQPDVMLFDEATSALDPELV 188 R +A ALL KVGLSD+ ++YP KLSGGQKQR+AIARAL MQPD+MLFDE TSALDPELV Sbjct: 116 VRKRAEALLYKVGLSDKMNVYPSKLSGGQKQRVAIARALCMQPDIMLFDEPTSALDPELV 175 Query: 189 GEVLNVIRGLAADGMTMILVTHEIAFAREVADQVVFMRDGVVVEAGPPSQVIDNPREAAT 248 GEVL+V++ LA +GMTM++VTHE+ FAREVAD+V+FM G +VE P + NP+E T Sbjct: 176 GEVLSVMKELAEEGMTMVVVTHEMGFAREVADRVIFMDGGKIVEENTPEGIFTNPKEERT 235 Query: 249 QAFLARF 255 + FL + Sbjct: 236 KEFLNKI 242 >BS_yckI [E] COG1126 ABC-type polar amino acid transport system, ATPase component Bsu Bacillus subtilis Length = 247 Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 133/246 (54%), Positives = 180/246 (73%), Gaps = 4/246 (1%) Query: 9 MIQISNLKKAFGEHVVLKDISIAVPRGSVVAMIGPSGSGKSTLLRCLNLLTVPDLGTVRI 68 M+ + L K+FGE+ +LK I + + +G V+A++GPSGSGK+TLLRCLN L +P+ G + Sbjct: 1 MLTVKGLNKSFGENEILKKIDMKIEKGKVIAILGPSGSGKTTLLRCLNALEIPNRGELAF 60 Query: 69 GERHFEFNGRKSRLPKDRELAAFRARTGMVFQHFNLFPHMTAVENVMEGMVTVLRTPKAE 128 + +F S+ K ++ R ++ MVFQ ++LFPH TA+ENVMEG V V + K E Sbjct: 61 DDFSIDF----SKKVKQADILKLRRKSPMVFQAYHLFPHRTALENVMEGPVQVQKRNKEE 116 Query: 129 ARAKAMALLQKVGLSDRADMYPQKLSGGQKQRIAIARALAMQPDVMLFDEATSALDPELV 188 R +A+ LL KVGL D+ D+YP +LSGGQ+QR+ IARALA+QP++MLFDE TSALDPELV Sbjct: 117 VRKEAIQLLDKVGLKDKMDLYPFQLSGGQQQRVGIARALAIQPELMLFDEPTSALDPELV 176 Query: 189 GEVLNVIRGLAADGMTMILVTHEIAFAREVADQVVFMRDGVVVEAGPPSQVIDNPREAAT 248 GEVL VI+ LA +G TM++VTHEI FA+EVAD+V+F+ GV+VE GPP Q+ P+E T Sbjct: 177 GEVLKVIKDLANEGWTMVVVTHEIKFAQEVADEVIFIDGGVIVEQGPPEQIFSAPKEERT 236 Query: 249 QAFLAR 254 Q FL R Sbjct: 237 QRFLNR 242 >Cgl1298 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Cgl Corynebacterium glutamicum Length = 254 Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 138/252 (54%), Positives = 184/252 (73%), Gaps = 2/252 (0%) Query: 6 SDAMIQISNLKKAFGEHVVLKDISIAVPRGSVVAMIGPSGSGKSTLLRCLNLLTVPDLGT 65 S MI + K +G VLK I + VP+G+V +IGPSGSGKST+LRC+N L + G Sbjct: 2 SQLMIDAQQVCKNYGRLEVLKGIDLQVPKGTVTCLIGPSGSGKSTMLRCVNHLEKVNAGR 61 Query: 66 VRIGERHFEFNGRKSRLPK--DRELAAFRARTGMVFQHFNLFPHMTAVENVMEGMVTVLR 123 + + + R L + +++ A R+ GMVFQ+FNLFPH T +EN++E + V + Sbjct: 62 LYVDGDLIGYRERDGVLYEISEKDAAKQRSDIGMVFQNFNLFPHRTVIENIIEAPIHVKK 121 Query: 124 TPKAEARAKAMALLQKVGLSDRADMYPQKLSGGQKQRIAIARALAMQPDVMLFDEATSAL 183 P+++ARA+AM LL++VGL+ +AD YP +LSGGQ+QR+AIARA+AM+P +MLFDE TSAL Sbjct: 122 QPESKARARAMELLEQVGLAHKADAYPVQLSGGQQQRVAIARAVAMEPKLMLFDEPTSAL 181 Query: 184 DPELVGEVLNVIRGLAADGMTMILVTHEIAFAREVADQVVFMRDGVVVEAGPPSQVIDNP 243 DPELVGEVL V++ LA DGMTM++VTHE+ FA EVADQVVFM DGVVVEAG P QV+DNP Sbjct: 182 DPELVGEVLRVMKQLADDGMTMLVVTHEMGFAHEVADQVVFMADGVVVEAGTPEQVLDNP 241 Query: 244 REAATQAFLARF 255 +E T+ FL+ Sbjct: 242 KEQRTKDFLSSL 253