BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0006.0002.p (414 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3273 [E] COG0624 Acetylornithine deacetylase/Succinyl-diamino... 389 e-108 PAE2335 [E] COG0624 Acetylornithine deacetylase/Succinyl-diamino... 153 8e-37 SSO1538 [E] COG0624 Acetylornithine deacetylase/Succinyl-diamino... 151 3e-36 mlr1185 [E] COG0624 Acetylornithine deacetylase/Succinyl-diamino... 124 3e-28 PH0265 [E] COG0624 Acetylornithine deacetylase/Succinyl-diaminop... 118 3e-26 >RSc3273 [E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Rso Ralstonia solanacearum Length = 424 Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust. Identities = 206/407 (50%), Positives = 263/407 (64%), Gaps = 7/407 (1%) Query: 12 AWIDQHFEEEVGVLQQLIRIPTDTPPGNNAPHADAVAELVQSWGWQAEKHAVPADQVRDY 71 A+++ ++V L++L+++P+D P G+ APHA L+++ G E H VP +V Sbjct: 17 AFVEAAHAQQVVFLRELVKVPSDNPSGDCAPHAARARALLEALGLAVEAHPVPEAEVLAA 76 Query: 72 GMQSITNLIVRRPYGDGGPTLALNAHGDVVPPGEGWTHDPYGGEVADGR----IYGRAAA 127 GM S TNLIVR +G GGPT+ALNAHGDVVPPG GWTHDPYGGE+ + ++GR A Sbjct: 77 GMVSATNLIVRHTFGRGGPTIALNAHGDVVPPGLGWTHDPYGGEIVETEHGPTMFGRGVA 136 Query: 128 VSKSDFASYIFATRAL---ESLGAALRGAVELHFTYDEEFGGVLGPGWLLEQKLTRPDYV 184 VSKSDFA+Y +A AL E GA L G VELHFTYDEE GG +GP WLL+ LTRPDY Sbjct: 137 VSKSDFATYTWALLALIEAERRGARLNGTVELHFTYDEETGGHIGPKWLLDHGLTRPDYA 196 Query: 185 LAAGFSYNVVTAHNACLQFEVTVHGRATHGSMPETGHDALQAANAILNAIYGALPGLKDI 244 ++AGF++ + +AHN CL VTV GR H +MP TG DA++AA IL A+Y L Sbjct: 197 ISAGFAHGITSAHNGCLHAAVTVRGRQAHAAMPHTGLDAIEAATHILQAVYAYRAELATR 256 Query: 245 RSSIPGISHPTMIVGRIDGGTNTNVVPGKVVLKMDRRMIPEEDPAQVEAGVRKLIEDAVA 304 S++PGI H T+ VG I GG NTNVVP +V ++DRRMIPEE E +R +IE A Sbjct: 257 TSAVPGIDHATLNVGLIQGGINTNVVPDRVTFRVDRRMIPEEAGRDAEGELRAVIERAAR 316 Query: 305 GLPGIRVEIRRLLLARALRPLPGHEKLVDSLLRNAEQVMGETLTTNGSALYTDARLYGEA 364 PGI V + R+LLA L LPG + L+ +L + A V G + +G LYTDAR Y Sbjct: 317 ERPGIAVSVERILLAEPLAELPGVQTLIAALRQQALAVFGGDVPVHGVPLYTDARHYTAH 376 Query: 365 GIPVVLFGAGPRTLMESNAKQADENLALDDLKKATKVVALMLLDFLG 411 G+P VL+GAGPRTLME+ DENL L DL+ AT VV + LG Sbjct: 377 GVPTVLYGAGPRTLMEARGHNTDENLRLSDLRGATVVVGCAVGALLG 423 >PAE2335 [E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Pya Pyrobaculum aerophilum Length = 397 Score = 153 bits (386), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 123/367 (33%), Positives = 174/367 (47%), Gaps = 20/367 (5%) Query: 22 VGVLQQLIRIPTDTPPGNN-APHADAVAELVQSWGWQAEKHAVPADQV--RDYGMQSITN 78 V +L +LI IPT PPG A + V +L ++ G E VP +V R Sbjct: 6 VSILSKLISIPTVNPPGEKYAEFVEYVEKLFKTLGLDTEIIEVPKSEVAKRCAECADYPR 65 Query: 79 LIVRRPYGDGGPTLALNAHGDVVPPG--EGW-THDPYGGEVADGRIYGRAAAVSKSDFAS 135 LI+ G+ P + N H DVVPPG E W P+ +GR+YGR A K S Sbjct: 66 LILLARSGE--PRIHFNGHYDVVPPGPLESWRVTMPFEPVYREGRVYGRGAVDMKGGLTS 123 Query: 136 YIFATRALESLGAALRGAVELHFTYDEEFGGVLGPGWLLEQ-KLTRPDYVLAAGFSY-NV 193 I A S G E+ F DEE GG G G+L + K+ P V+A G N+ Sbjct: 124 IILAVEKAASNGLK---NFEVSFVPDEETGGETGAGYLAKSGKIKAPWVVIAEGSGEDNI 180 Query: 194 VTAHNACLQFEVTVHGRATHGSMPETGHDALQAANAILNAIYGALPGLKDIRSSI----P 249 H + F V V+G+ HGS P G +A + A I + + + RS+ P Sbjct: 181 WIGHRGLIWFMVEVYGKQAHGSTPWYGLNAFEGAAYIAYRLQEYIKSISSRRSNYEYDDP 240 Query: 250 GISHPTMIVG-RIDGGTNTNVVPGKVVLKMDRRMIPEEDPAQVEAGVRKLIEDAVAGLPG 308 + PT+ +G + G TNVVPG +DRR+IPEED QV+ + IE LP Sbjct: 241 RGASPTVTIGGEVRGSVKTNVVPGYFAFSVDRRIIPEEDLEQVKREFVEFIEKVAKELPH 300 Query: 309 IRVEIRRLLLARALRPLPGHEKLVDSLLRNAEQVMGETLTTNGSALYTDARLYGEAGIPV 368 +VE++ ++ A P H LV++L ++ E+V+G+ DAR + +AG P Sbjct: 301 -KVEVKITNISEAALVEPNH-PLVEALSKSVEEVIGKRPRKTVCIGGLDARFFIKAGHPT 358 Query: 369 VLFGAGP 375 V +G GP Sbjct: 359 VTYGPGP 365 >SSO1538 [E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Sso Sulfolobus solfataricus Length = 410 Score = 151 bits (381), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 120/402 (29%), Positives = 192/402 (47%), Gaps = 22/402 (5%) Query: 20 EEVGVLQQLIRIPTDTPPG-NNAPHADAVAELVQSWGWQAEKHAVPADQVRD---YGMQS 75 E V L++LIRIPT+ PPG N + + + +G++ + ++++ +G Sbjct: 14 EIVDFLKELIRIPTENPPGLNYEKIVNVIKNKLDEFGYKTQVIEPTDEELKSLIRFGYGK 73 Query: 76 ITNLIVRRPYGDGGPTLALNAHGDVVPPGEGWTHDPYGGEVADGRIYGRAAAVSKSDFAS 135 NL+ G+G +A NAH DVVP GEGW+ DPY G DG+IYGR A+ KS + Sbjct: 74 RPNLV--GYLGNGNNRIAFNAHYDVVPAGEGWSVDPYKGIEKDGKIYGRGASDMKSGIVA 131 Query: 136 YIFATRALESLGAALRGAVELHFTY--DEEFGGVLGPG-WLLEQK--LTRPDYVLAAGFS 190 I+A L L +++ T DEE G G + L QK +YV+ + Sbjct: 132 QIYAIEMLRR-AKLLPSNIQVIQTIVPDEETVGNRNAGTYYLVQKGIFKNVNYVIFTEPT 190 Query: 191 --YNVVTAHNACLQFEVTVHGRATHGSMPETGHDALQAANAILNAIYGALPGLKDIRSSI 248 NV H + V V+G+ +HG P+ G DA++A + ++ +Y A+P + Sbjct: 191 GPDNVCNGHRGAIWAIVRVYGKKSHGGFPQLGIDAVKATSLMIEELYKAIPDIVSKYEIS 250 Query: 249 PGI-SHPTMIVGRIDGGTNTNVVPGKVVLKMDRRMIPEEDPAQVEAGVRKLIEDAVAGLP 307 P PT++VG + GT N V + RR+IPEE+ +V + +++ D ++ Sbjct: 251 PESGKKPTILVGVVKCGTWVNTVADYCEFSIVRRLIPEENLEEVRHSIIRVL-DNISKST 309 Query: 308 GIRVEIRRLLLARALRPLPGHEKLVDSLLRNAEQVMGETLTTNGSALYTDARLYGEAGIP 367 G+R E +R E+L+ +L +V G T SA D R GI Sbjct: 310 GVRYEYDEFYAVNTMR--CDDERLISALREKIREVRGVEARTVLSAGTFDIRFTINEGIK 367 Query: 368 VVLFGAGPRTLMESNAKQADENLALDDLKKATKVVALMLLDF 409 + +G G L +N DE + + DL + KV+ L++L+ Sbjct: 368 SINYGPGRIELAHAN----DEYIYVKDLLDSIKVLGLLVLEL 405 >mlr1185 [E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Mlo Mesorhizobium loti Length = 425 Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 104/334 (31%), Positives = 143/334 (42%), Gaps = 26/334 (7%) Query: 6 LSERLCAWIDQHFEEEVGVLQQLIRIPTDTPPGN-NAPHADAVAELVQSWGWQAE---KH 61 ++ERL ID ++ V + LIR PT PPG P A+ V ++ G++ E Sbjct: 1 MNERLLQAIDDRRDDVVALTADLIRFPTINPPGEAYRPCAEFVGARLRKRGFETEFIRAE 60 Query: 62 AVPADQVRDYGMQSITNLIVRRPYGDGGPTLALNAHGDVVPPGEGWTHDPYGGEVADGRI 121 P D R + + R P G + N+H DVV G+GWT DP+ G V DGR+ Sbjct: 61 GTPGDTDRYPRVNVVARFDGRSP----GACVHFNSHIDVVEAGDGWTVDPFAGIVRDGRV 116 Query: 122 YGRAAAVSKSDFASYIFATRALESLGAALRGAVELHFTYDEE---FGGVLGPGWLLEQKL 178 YGR A K A+ I A A + G +E+ T DEE FGGV L Sbjct: 117 YGRGACDMKGGLAASIIAAEAFMEVYPDFPGTIEISGTVDEESGGFGGVAHLAGLGYFSK 176 Query: 179 TRPDYVLAAG--FSYNVVTAHNACLQFEVTVHGRATHGSMPETGHDALQAANAILNAIYG 236 R D+V+ + H E+ G HGSMP G +A++ A+L A Sbjct: 177 PRVDHVIIPEPLNKDRICLGHRGVWWAEIETKGEIAHGSMPFLGDNAVRHMGAVLQAFED 236 Query: 237 AL-PGLKDIRSSIP----GISHPTMIVGRIDGGTNTNVVPG--------KVVLKMDRRMI 283 L P L + +P G TM + I GG + PG L +DRR + Sbjct: 237 ELFPALDRKMTRMPVVPEGARRSTMNINSIHGGQTEDFRPGLPSPNVPDSCRLTIDRRFL 296 Query: 284 PEEDPAQVEAGVRKLIEDAVAGLPGIRVEIRRLL 317 EED A V+ V ++E EIR L+ Sbjct: 297 LEEDLATVKGEVTGILERLKRERKKFDYEIRDLM 330 >PH0265 [E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Pho Pyrococcus horikoshii Length = 411 Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 112/431 (25%), Positives = 192/431 (44%), Gaps = 45/431 (10%) Query: 1 MSKQQLSERLCAWIDQHFEEEVGVLQQLIRIPTDTPPGNNAPHADAVAELVQSWGWQAEK 60 M ++ +++ ID +E V L +LI+IP +P D +L++ Sbjct: 1 MVSMEVLDKVAREIDSLRDEMVSTLIELIKIPAISPDFGGTGEYDKAEKLLEIL------ 54 Query: 61 HAVPADQVRDY------GMQSITNLIVRRPYGDGGPTLALNAHGDVVPPGEGWT-HDPYG 113 ++P D+V + + IV YG+ L + +H DVVPPGEGWT +P+ Sbjct: 55 RSLPFDKVETFNAPDPRAKNGVRPNIVAYYYGESDERLWILSHLDVVPPGEGWTVTEPFK 114 Query: 114 GEVADGRIYGRAAAVSKSDFASYIFATRALESLGAALRGAVELHFTYDEEFGGVLGPGWL 173 V DG++YGR + + S ++A +AL LG + V L F DEE G G WL Sbjct: 115 PIVKDGKVYGRGSEDNGQAIVSSLYAVKALMDLGIRPKRTVVLAFVSDEETGSKYGIEWL 174 Query: 174 LE---QKLTRPDYVLA--AGFSYN--VVTAHNACLQFEVTVHGRATHGSMPETGHDALQA 226 ++ + + D VL G S + A + L ++ V G+ H SMP G +A + Sbjct: 175 IKNHPELFKKDDLVLVPDGGNSEGTFIEVAEKSILWMKIKVKGKQAHASMPHKGINAHRI 234 Query: 227 ANAILNAIYGALPGLKDIRSSI----PGISHPTMIVGRIDGGTNTNVVPGKVVLKMDRRM 282 A+ +L ++ L R + PTM+ + + NV+PG+ D R+ Sbjct: 235 ASELLVSLDKFLHEKYSKRDQLYDPPESTFEPTMVN---NPAGSPNVIPGEHEFVFDCRV 291 Query: 283 IPEEDPAQVEAGVRKLIEDAVAGLPGIRVEIRRLLLARALRPLPGHEKLVD------SLL 336 +P+ ++ VRK+ + ++ L A +P + K+V+ LL Sbjct: 292 LPDYSLDEIIGDVRKICTEITEKYKA-SYDLEILQRLDAPKPTDPNSKIVNLLKEALKLL 350 Query: 337 RNAEQVMGETLTTNGSALYTDARLYGEAGIPVVLFGAGPRTLMESNAKQADENLALDDLK 396 RN E ++G G T A + + GIP V++ ++ A Q +E ++++ Sbjct: 351 RNKEPIVG------GIGGGTFAAFFRKIGIPAVVWAT-----LDETAHQPNEYAKIENIV 399 Query: 397 KATKVVALMLL 407 + KV+A + L Sbjct: 400 EDAKVMAALSL 410