BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0004.0177.p         (79 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BS_ycbE [GEPR] COG0477 Permeases of the major facilitator superf...    77   1e-14
RSp0828 [GEPR] COG0477 Permeases of the major facilitator superf...    75   4e-14
Z4105 [GEPR] COG0477 Permeases of the major facilitator superfam...    75   4e-14
ECs3649 [GEPR] COG0477 Permeases of the major facilitator superf...    75   4e-14
ygcZ [GEPR] COG0477 Permeases of the major facilitator superfami...    75   4e-14

>BS_ycbE [GEPR] COG0477 Permeases of the major facilitator superfamily Bsu
          Bacillus subtilis
          Length = 455

 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 33/54 (61%), Positives = 45/54 (83%)

Query: 12 AGKPTHIRYLILFLLFVVTTVNYADRATLSIAGSAMKTELSLDPVTMGYIFSAF 65
          AGK T +R+ I+F+LF+VT++NYADRATLSI G +++ +L LD V MGY+FSAF
Sbjct: 11 AGKKTSVRWFIVFMLFLVTSINYADRATLSITGDSVQHDLGLDSVAMGYVFSAF 64


>RSp0828 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso
          Ralstonia solanacearum
          Length = 450

 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 46/52 (88%)

Query: 14 KPTHIRYLILFLLFVVTTVNYADRATLSIAGSAMKTELSLDPVTMGYIFSAF 65
          + + +R++IL +LF+VTT+NYADRAT+S+AGSAM+ +L +D V++GYIFSAF
Sbjct: 18 RTSRVRFMILAMLFIVTTINYADRATISMAGSAMQKDLGIDAVSLGYIFSAF 69


>Z4105 [GEPR] COG0477 Permeases of the major facilitator superfamily EcZ
          Escherichia coli O157:H7 EDL933
          Length = 450

 Score = 75.1 bits (183), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/63 (55%), Positives = 47/63 (74%)

Query: 4  SNTHSGAAAGKPTHIRYLILFLLFVVTTVNYADRATLSIAGSAMKTELSLDPVTMGYIFS 63
          S + + ++  K T+ RY I+ +LF+VT+ NY DRATLSIAGS M  ++ LDPV MGY+FS
Sbjct: 3  SLSQAASSVEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYVFS 62

Query: 64 AFS 66
          AFS
Sbjct: 63 AFS 65


>ECs3649 [GEPR] COG0477 Permeases of the major facilitator superfamily Ecs
          Escherichia coli O157:H7
          Length = 450

 Score = 75.1 bits (183), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/63 (55%), Positives = 47/63 (74%)

Query: 4  SNTHSGAAAGKPTHIRYLILFLLFVVTTVNYADRATLSIAGSAMKTELSLDPVTMGYIFS 63
          S + + ++  K T+ RY I+ +LF+VT+ NY DRATLSIAGS M  ++ LDPV MGY+FS
Sbjct: 3  SLSQAASSVEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYVFS 62

Query: 64 AFS 66
          AFS
Sbjct: 63 AFS 65


>ygcZ [GEPR] COG0477 Permeases of the major facilitator superfamily Eco
          Escherichia coli K12
          Length = 450

 Score = 74.7 bits (182), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/63 (55%), Positives = 47/63 (74%)

Query: 4  SNTHSGAAAGKPTHIRYLILFLLFVVTTVNYADRATLSIAGSAMKTELSLDPVTMGYIFS 63
          S + + ++  K T+ RY I+ +LF+VT+ NY DRATLSIAGS M  ++ LDPV MGY+FS
Sbjct: 3  SLSQAASSVEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYVFS 62

Query: 64 AFS 66
          AFS
Sbjct: 63 AFS 65