BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0004.0154.p         (153 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1257 [P] COG0607 Rhodanese-related sulfurtransferase Rso Rals...   152   3e-37
ML0276 [P] COG0607 Rhodanese-related sulfurtransferase Mle Mycob...   105   4e-23
Rv0390 [P] COG0607 Rhodanese-related sulfurtransferase Mtu Mycob...    95   7e-20
RSc0296 [P] COG0607 Rhodanese-related sulfurtransferase Rso Rals...    82   4e-16
RC0915 [P] COG0607 Rhodanese-related sulfurtransferase Rco Ricke...    71   9e-13

>RSc1257 [P] COG0607 Rhodanese-related sulfurtransferase Rso Ralstonia
           solanacearum
          Length = 158

 Score =  152 bits (383), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 84/137 (61%), Positives = 98/137 (71%)

Query: 17  GQLPYAGAVTPQEALALLQSDPAIKLVDVRTRAERDWVGVVQIPSGQHLAVQWNLYPEGK 76
           GQLPY GA+TP+E  ALL +DP  +LVDVRTRAE DWVG  Q+P+GQ + V+WN YP G 
Sbjct: 22  GQLPYFGALTPEETAALLAADPQARLVDVRTRAELDWVGAPQVPAGQFVHVEWNRYPGGV 81

Query: 77  PNPQFLEQLQEVARPGEVLLFLCRSGVRSKHAAKLATENGYTQCFDILEGFEGNKDANGH 136
            NP FL +L+        +LFLCRS  RSKHAA  AT+ GY    D+LEGFEG KDA GH
Sbjct: 82  RNPDFLAELEAAVPKDAPVLFLCRSAARSKHAAAAATQAGYALAMDVLEGFEGAKDAAGH 141

Query: 137 RKTIEGWCKAGLPWVGA 153
           RKT+EGWC  GLPW GA
Sbjct: 142 RKTVEGWCFRGLPWQGA 158


>ML0276 [P] COG0607 Rhodanese-related sulfurtransferase Mle Mycobacterium
           leprae
          Length = 147

 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 63/145 (43%), Positives = 87/145 (60%), Gaps = 10/145 (6%)

Query: 14  ATDGQLPYAGAVTPQEALALLQSDPAIKLVDVRTRAERDWVGVVQIPS-GQHLA-VQWNL 71
           +T+   PYAG +TP +A  +L  +P   LVDVRT AE  +VGV    S G+ +  ++WN 
Sbjct: 2   STEMNRPYAGDITPLQAWKMLSDNPHTVLVDVRTDAEWRFVGVPDTSSLGREVVYIEWNT 61

Query: 72  YPEGKPNPQFLEQLQEVARPGEV------LLFLCRSGVRSKHAAKLATENGYTQCFDILE 125
             +G PN  FL +LQE   P         ++FLCRSG RS  AA++AT+ G +  ++IL+
Sbjct: 62  -SDGLPNVNFLAELQERIPPANAERGERPVVFLCRSGHRSMGAAQVATDAGISPSYNILD 120

Query: 126 GFEGNKDANGHRKTIEGWCKAGLPW 150
           GFEG+ +A GHR    GW   GLPW
Sbjct: 121 GFEGHLNAEGHRGET-GWRAVGLPW 144


>Rv0390 [P] COG0607 Rhodanese-related sulfurtransferase Mtu Mycobacterium
           tuberculosis H37Rv
          Length = 140

 Score = 94.7 bits (234), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 60/142 (42%), Positives = 83/142 (58%), Gaps = 15/142 (10%)

Query: 19  LPYAGAVTPQEALALLQSDPAIKLVDVRTRAERDWVGVVQIPS-GQHLA-VQWNLYPEGK 76
           + YAG +TP +A  +L  +P   LVDVR  AE  +VGV  + S G+ +  V+W    +G 
Sbjct: 1   MSYAGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGREVVYVEWAT-SDGT 59

Query: 77  PNPQFLEQLQEVA--------RPGEVLLFLCRSGVRSKHAAKLATENGYTQCFDILEGFE 128
            N  FL +L++          RP   ++FLCRSG RS  AA++ATE G T  +++L+GFE
Sbjct: 60  HNDNFLAELRDRIPADADQHERP---VIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFE 116

Query: 129 GNKDANGHRKTIEGWCKAGLPW 150
           G+ DA GHR    GW   GLPW
Sbjct: 117 GHLDAEGHRGAT-GWRAVGLPW 137


>RSc0296 [P] COG0607 Rhodanese-related sulfurtransferase Rso Ralstonia
           solanacearum
          Length = 130

 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 71/128 (55%), Gaps = 6/128 (4%)

Query: 25  VTPQEALALLQSDPAIKLVDVRTRAERDWVGVVQIPSGQHLAVQWNLYPEGKPNPQFLEQ 84
           + P +A   LQ  PA   +D R+  E  +VG    P+G H A  WN  P  + NP+F+  
Sbjct: 4   LDPADAHVFLQRTPAALFIDCRSEMEHLFVGH---PAGSHHAA-WNDGPHWEINPEFVPT 59

Query: 85  LQEVARPG--EVLLFLCRSGVRSKHAAKLATENGYTQCFDILEGFEGNKDANGHRKTIEG 142
           +++++  G    ++ +CRSG RS  AA+     G+ + + +  GFEG+ DA  HR T+ G
Sbjct: 60  VRKLSGHGIDRPIVLICRSGNRSAAAAQALEAAGFREVYVVRHGFEGDLDATRHRNTLNG 119

Query: 143 WCKAGLPW 150
           W  AGLPW
Sbjct: 120 WRHAGLPW 127


>RC0915 [P] COG0607 Rhodanese-related sulfurtransferase Rco Rickettsia
           conorii
          Length = 123

 Score = 70.9 bits (172), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 12/127 (9%)

Query: 25  VTPQEALALLQSDPAIKLVDVRTRAERDWVGVVQIPS-GQHLAVQWNLYPEGKPNPQFLE 83
           +   +A  +L S+    LVDVRTR E   VG+  + +  + + + W L  + + N  FL 
Sbjct: 6   ICSTKAYDMLISNDNAFLVDVRTREEWQQVGIPHLDNKNKVIFLSWQLNKDFEDN--FLS 63

Query: 84  QLQEVARPGEVLLFLCRSGVRSKHAAKLATENGYTQCFDILEGFEGNKDANGHRKTIEGW 143
            + +  +   ++ FLCRSG RS  AA   T  GY  C++I +GFEGN          +GW
Sbjct: 64  IVND--KIHAIIFFLCRSGYRSFIAANFITNIGYKNCYNISDGFEGNNQD-------KGW 114

Query: 144 CKAGLPW 150
            +  LPW
Sbjct: 115 KQNNLPW 121