BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0004.0111.p         (175 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2382 Non COG                                                       111   9e-25

>RSc2382 Non COG
          Length = 180

 Score =  111 bits (277), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 84/161 (52%), Gaps = 19/161 (11%)

Query: 16  FGALLVALAMFGCDRN--GNPIEEFG----------------LDKLQKGVSSEADVRGVM 57
            G L   L +FGCD+      ++  G                   +Q G S+EADVR   
Sbjct: 1   MGLLASLLGLFGCDQQKVDQAVDRAGEAAKRAWQSAKPDNLLFKGIQAGQSTEADVRATA 60

Query: 58  GQPDTVWEDGGGAKTLEYPKGPEGIRTWMFRIGASGTLIDYTQVLTQEHFDTIRPGMSTE 117
           GQPD +WE+  G + LEYP+GPEG  TW+  IG  G +    Q+L+ ++F  +RPG + +
Sbjct: 61  GQPDMIWENEDGTRQLEYPRGPEGTSTWLVTIGPDGRVRGIDQLLSADNFGRVRPGQTRD 120

Query: 118 QIRREFGRPRSVVQFARKNEEVWDWKYHYVHEDR-LFNVHF 157
            +RR  G+P  V  F  K EEVW +++     +R  FNVHF
Sbjct: 121 DVRRLLGKPTKVEAFRLKQEEVWGYRWMENPTERAFFNVHF 161