BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0065.p (291 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value XF0470 [T] COG4943 Predicted signal transduction protein contain... 240 2e-63 BMEII0904 Non COG 231 2e-60 ZylaB [T] COG4943 Predicted signal transduction protein containi... 181 2e-45 ECs0510 [T] COG4943 Predicted signal transduction protein contai... 181 2e-45 ylaB [T] COG4943 Predicted signal transduction protein containin... 180 3e-45 >XF0470 [T] COG4943 Predicted signal transduction protein containing sensor and EAL domains Xfa Xylella fastidiosa 9a5c Length = 530 Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 119/249 (47%), Positives = 168/249 (67%), Gaps = 1/249 (0%) Query: 5 AQFKRAIEREEFRVVYQPIVVLADGRCAGAEVLVRWQREDGALLPPDRFLAAAQRHGYLN 64 + ++AI+R EF V YQPIV L+DGRC GAE LVRW+++DG L+ PD+F+ A+R G + Sbjct: 277 TRLRQAIQRCEFFVCYQPIVSLSDGRCVGAEALVRWRQQDGTLILPDQFIPLAERSGLIL 336 Query: 65 AITDRVLQQTVSDLAPTLRAHRCLHAAVNIPAQDVNSGRILEVLDAALDGTGIVPAQLWL 124 ITD+V+ ++ +L P L A R LH A+N+ +D+ SGR+L+VL AL TG+ QLW+ Sbjct: 337 PITDQVIAASMRELGPLLVADRSLHIAINVSVKDIESGRLLDVLALALQDTGLYRKQLWI 396 Query: 125 EITESSSMETLPSRETLSRARERGHLIALDDFGTGYSCLRYLHELPCDVLKLDRSFVIGI 184 E TE S M+ +RE + R RE G+ + +DDFGTGYS L+YL +LP D LK+D+SF+ + Sbjct: 397 EATERSFMDARAAREHIVRLREAGYAVVIDDFGTGYSNLQYLQQLPLDALKIDKSFIDTV 456 Query: 185 GTDHEHPVLAC-IIDLARKLKLKIVAEGVETPVQARYLEQACVDYAQGWHYARPMLAAEF 243 G D + +A IID+A++L ++ +AEGVE Q YL VD AQGW ++ P+ AAEF Sbjct: 457 GRDVTNTAVASHIIDIAKELGMRTIAEGVEREEQLTYLRARGVDMAQGWLFSSPLSAAEF 516 Query: 244 ARYCDRAAS 252 Y R S Sbjct: 517 VDYLARNRS 525 >BMEII0904 Non COG Length = 530 Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 122/265 (46%), Positives = 161/265 (60%), Gaps = 3/265 (1%) Query: 4 KAQFKRAIEREEFRVVYQPIVVLADGRCAGAEVLVRWQREDGALLPPDRFLAAAQRHGYL 63 + + AI R EF VVYQP++ L G C GAE LVRW+R DGA++ PD F+ A+ + Sbjct: 266 RGELAIAIRRREFTVVYQPLIELKTGICVGAEALVRWRRPDGAMVMPDLFIPIAENSKMI 325 Query: 64 NAITDRVLQQTVSDLAPTLRAHRCLHAAVNIPAQDVNSGRILEVLDAALDGTGIVPAQLW 123 + IT++V+ TV DL L A LH A+N+ A D+ GRIL V+ A+ GTGI Q+W Sbjct: 326 SQITEQVVANTVRDLGDVLAADEALHVAINMAADDLAQGRILTVVQRAIRGTGIRTEQIW 385 Query: 124 LEITESSSMETLPSRETLSRARERGHLIALDDFGTGYSCLRYLHELPCDVLKLDRSFVIG 183 LE TE M+ +R + +ARE GH IA+DDFGTGYS L YL ELP D LK+D+SF+ Sbjct: 386 LEATERGFMDPKSTRTIIEKARELGHSIAIDDFGTGYSSLHYLQELPVDTLKIDKSFIST 445 Query: 184 IGTDH-EHPVLACIIDLARKLKLKIVAEGVETPVQARYLEQACVDYAQGWHYARPMLAAE 242 +GTD P+ A II +A+ L L IVAEG+E QA YL V + QGW Y+ P+ A E Sbjct: 446 LGTDSATSPIAAHIIAMAKSLDLIIVAEGIERQEQADYLIAHGVQFGQGWLYSPPLPAQE 505 Query: 243 FARY--CDRAASPAGSPLSPLSLHA 265 F + +A AG + HA Sbjct: 506 FIEFYKAQKATKGAGPAIIRKKKHA 530 >ZylaB [T] COG4943 Predicted signal transduction protein containing sensor and EAL domains EcZ Escherichia coli O157:H7 EDL933 Length = 518 Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 3/244 (1%) Query: 6 QFKRAIEREEFRVVYQPIVVLADGRCAGAEVLVRWQREDGALLPPDRFLAAAQRHGYLNA 65 + + AIE + V YQPIV LA+G+ GAE L RW + DG+ L PD F+ AQ+ G Sbjct: 276 RLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEP 335 Query: 66 ITDRVLQQTVSDLAPTLRAHRCLHAAVNIPAQDVNSGRILEVLDAALDGTGIVPAQLWLE 125 +T +++ D+ LR H H ++N+ + + S +I ++L ++ + P Q+ LE Sbjct: 336 LTLLIIRSVFEDMGDWLRQHPQQHISINLESTVLTSEKIPQLLREMINHYQVNPRQIALE 395 Query: 126 ITESSSMETLPSRETLSRARERGHLIALDDFGTGYSCLRYLHELPCDVLKLDRSFVIGIG 185 +TE + S +SR RE GH I LDDFGTGYS L YL +L D+LK+D+SFV + Sbjct: 396 LTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE 455 Query: 186 TDHEHPVLACIIDLARKLKLKIVAEGVETPVQARYLEQACVDYAQGWHYARPMLAAEFAR 245 + P II++A+ LKLK+VAEG+ET Q +L Q V Y QGW Y++ + +F R Sbjct: 456 YKNVTP---HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 512 Query: 246 YCDR 249 + ++ Sbjct: 513 WAEQ 516 >ECs0510 [T] COG4943 Predicted signal transduction protein containing sensor and EAL domains Ecs Escherichia coli O157:H7 Length = 518 Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 3/244 (1%) Query: 6 QFKRAIEREEFRVVYQPIVVLADGRCAGAEVLVRWQREDGALLPPDRFLAAAQRHGYLNA 65 + + AIE + V YQPIV LA+G+ GAE L RW + DG+ L PD F+ AQ+ G Sbjct: 276 RLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEP 335 Query: 66 ITDRVLQQTVSDLAPTLRAHRCLHAAVNIPAQDVNSGRILEVLDAALDGTGIVPAQLWLE 125 +T +++ D+ LR H H ++N+ + + S +I ++L ++ + P Q+ LE Sbjct: 336 LTLLIIRSVFEDMGDWLRQHPQQHISINLESTVLTSEKIPQLLREMINHYQVNPRQIALE 395 Query: 126 ITESSSMETLPSRETLSRARERGHLIALDDFGTGYSCLRYLHELPCDVLKLDRSFVIGIG 185 +TE + S +SR RE GH I LDDFGTGYS L YL +L D+LK+D+SFV + Sbjct: 396 LTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE 455 Query: 186 TDHEHPVLACIIDLARKLKLKIVAEGVETPVQARYLEQACVDYAQGWHYARPMLAAEFAR 245 + P II++A+ LKLK+VAEG+ET Q +L Q V Y QGW Y++ + +F R Sbjct: 456 YKNVTP---HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 512 Query: 246 YCDR 249 + ++ Sbjct: 513 WAEQ 516 >ylaB [T] COG4943 Predicted signal transduction protein containing sensor and EAL domains Eco Escherichia coli K12 Length = 518 Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 96/244 (39%), Positives = 144/244 (59%), Gaps = 3/244 (1%) Query: 6 QFKRAIEREEFRVVYQPIVVLADGRCAGAEVLVRWQREDGALLPPDRFLAAAQRHGYLNA 65 + + AIE + V YQPIV LA+G+ GAE L RW + DG+ L PD F+ AQ+ G Sbjct: 276 RLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEP 335 Query: 66 ITDRVLQQTVSDLAPTLRAHRCLHAAVNIPAQDVNSGRILEVLDAALDGTGIVPAQLWLE 125 +T +++ D+ LR H H ++N+ + + S +I ++L ++ + P Q+ LE Sbjct: 336 LTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 395 Query: 126 ITESSSMETLPSRETLSRARERGHLIALDDFGTGYSCLRYLHELPCDVLKLDRSFVIGIG 185 +TE + S +SR RE GH I LDDFGTGYS L YL +L D+LK+D+SFV + Sbjct: 396 LTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE 455 Query: 186 TDHEHPVLACIIDLARKLKLKIVAEGVETPVQARYLEQACVDYAQGWHYARPMLAAEFAR 245 + P II++A+ LKLK+VAEG+ET Q +L Q V Y QGW Y++ + +F R Sbjct: 456 YKNVTP---HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 512 Query: 246 YCDR 249 + ++ Sbjct: 513 WAEQ 516