BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0004.0034.p         (120 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2943 [S] COG3671 Predicted membrane protein Rso Ralstonia sol...    74   6e-14

>RSc2943 [S] COG3671 Predicted membrane protein Rso Ralstonia solanacearum
          Length = 124

 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 9/88 (10%)

Query: 34  GMLSWLPLIVNYLKRGDVRDTFLYTHHRWQIRSFWWYLFWLFAGGVLWATVIGIPVAILV 93
           G+ + + +IV Y+KR DVR T   +H RWQIRSFWW + W   G      V+ IP+A L 
Sbjct: 39  GITALIAIIVGYVKRDDVRGTLYESHFRWQIRSFWWCVLWGVIG------VLLIPLAFLG 92

Query: 94  FSLAW---IWKAYRLIKGFLDLQDNKPM 118
           F++ W   IW  YR++KG+L L D+KPM
Sbjct: 93  FAVLWALGIWMLYRIVKGWLYLNDSKPM 120