BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0004.0023.p         (307 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp0396_1 [S] COG0586 Uncharacterized membrane-associated protei...   178   1e-44
PA1209_1 [S] COG0586 Uncharacterized membrane-associated protein...   140   3e-33
RSp0396_2 [P] COG0607 Rhodanese-related sulfurtransferase Rso Ra...   117   2e-26
PA1209_2 [P] COG0607 Rhodanese-related sulfurtransferase Pae Pse...    86   1e-16
slr0232 [S] COG0586 Uncharacterized membrane-associated protein ...    73   9e-13

>RSp0396_1 [S] COG0586 Uncharacterized membrane-associated protein Rso
           Ralstonia solanacearum
          Length = 196

 Score =  178 bits (452), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 96/196 (48%), Positives = 135/196 (68%)

Query: 1   METLYHLIEQYGLILVFVNVLVEQLGAPVPAYPTLIITGALSATGRYSPALLLLLAVSAA 60
           M  L+ LI +YG+  VF NV + Q GAP+PA PTL++ GAL+A G      LL  A++ A
Sbjct: 1   MHDLFPLIAEYGVFAVFANVFLTQAGAPLPAVPTLLVAGALTADGALPWPELLPSALTGA 60

Query: 61  LIADYCWYLAGRRYGRQIMSRLCRISLSPDSCVRQTESIYLRWGARSLLLAKFIPGFASI 120
           L+ D  WYLAG+RYGR +M+ LCR+SLSPDSCVR+T + + RWGA  LL+AKF+PG +++
Sbjct: 61  LLGDGLWYLAGQRYGRHVMALLCRLSLSPDSCVRRTRTQFERWGAPMLLIAKFVPGLSTV 120

Query: 121 ASALSGTMGTRRISFLLWDAAGSALWAGLGIFLGSLFSSAVDDLLNVLAQLGHYGMLMIA 180
           +SAL GTM T   +F L+D  GSALWA   + LG     ++D LL  L QLG + ++++A
Sbjct: 121 SSALLGTMRTPFSTFALYDLLGSALWAAGWMLLGRGAHGSIDPLLTHLDQLGGHAVVLVA 180

Query: 181 VALAAFVANKWWQRRR 196
           + +A ++A +W QR R
Sbjct: 181 LLVAVYIAARWLQRWR 196


>PA1209_1 [S] COG0586 Uncharacterized membrane-associated protein Pae
           Pseudomonas aeruginosa
          Length = 204

 Score =  140 bits (353), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/171 (50%), Positives = 122/171 (71%), Gaps = 1/171 (0%)

Query: 23  EQLGAPVPAYPTLIITGALSATGRYSP-ALLLLLAVSAALIADYCWYLAGRRYGRQIMSR 81
           EQ G P+PAYP LI+ GAL+  G  +P  ++LL+ V A L+AD  WYLAGRRYG  ++  
Sbjct: 23  EQAGLPIPAYPALIVAGALAMQGVGAPLGVVLLVVVLACLLADVAWYLAGRRYGGFLLRS 82

Query: 82  LCRISLSPDSCVRQTESIYLRWGARSLLLAKFIPGFASIASALSGTMGTRRISFLLWDAA 141
           +C++SLS DSC+RQ++++YLR G R+LL++KF+PG +++++ L+G   T    FL +DAA
Sbjct: 83  ICKVSLSQDSCIRQSQNMYLRVGPRALLMSKFLPGASALSTTLAGMTRTHLRRFLAYDAA 142

Query: 142 GSALWAGLGIFLGSLFSSAVDDLLNVLAQLGHYGMLMIAVALAAFVANKWW 192
           GSALWAG  + LG +FS AVD LL +L+     G L+IA A AAF+A K W
Sbjct: 143 GSALWAGSALLLGVIFSDAVDHLLALLSDYAAIGALLIAGAFAAFIAWKLW 193


>RSp0396_2 [P] COG0607 Rhodanese-related sulfurtransferase Rso Ralstonia
           solanacearum
          Length = 130

 Score =  117 bits (294), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/117 (54%), Positives = 77/117 (65%), Gaps = 12/117 (10%)

Query: 197 FRKSLEMARISVDELNTMLEEGNAPTIIDVRSPMSQ--QDGRIPGAVTISNQEIQTFVFD 254
           FRK LEM RIS DEL+ ++E G AP IIDVR+  S+  Q  RIPGA+            D
Sbjct: 1   FRKMLEMVRISPDELHALIESGEAPVIIDVRAGSSRMSQPHRIPGAMLYDMS-----AKD 55

Query: 255 GPVE-----GEVVVYCACPNEASAAMVARQLMRRGYTRVRPLTGGIDAWRAAGYAID 306
           GP+E      E+V+YCACPNEASA M+AR LM RG+ RVRPL GGIDAW   GY ++
Sbjct: 56  GPIEIEGPDREIVIYCACPNEASAVMLARTLMGRGFRRVRPLHGGIDAWMDRGYGVE 112


>PA1209_2 [P] COG0607 Rhodanese-related sulfurtransferase Pae Pseudomonas
           aeruginosa
          Length = 107

 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 64/102 (62%), Gaps = 6/102 (5%)

Query: 203 MARISVDELNTMLEEGNAPTIIDVRSPMSQQDGRIPGAVTISNQEIQTFVFDGP---VEG 259
           + RISV+EL  + E+G  P I+DVR+    +   IPGA+ +   E+   + D P    + 
Sbjct: 1   IPRISVEELENLREQGQLPVILDVRAHHEDEPSGIPGAIPV---ELNVSLKDLPGDLRDA 57

Query: 260 EVVVYCACPNEASAAMVARQLMRRGYTRVRPLTGGIDAWRAA 301
            +V+YCACP+E SAAM+A++L   G+TR   L GG+DAWR A
Sbjct: 58  SIVIYCACPHELSAAMLAQRLNASGFTRTWALAGGLDAWRKA 99


>slr0232 [S] COG0586 Uncharacterized membrane-associated protein Syn
           Synechocystis
          Length = 218

 Score = 72.8 bits (177), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 99/206 (48%), Gaps = 7/206 (3%)

Query: 1   METLYHLIEQYGLILVFVNVLVEQLGAPVPAYPTLIITGALSATGRYSPALLLLLAVSAA 60
           +ETL  L  QYG   VF  + +E  G P+P     ++ G L+ +G  S   +L+ A++ A
Sbjct: 8   LETLQELARQYGYGAVFFGIALENAGIPIPGETITLLGGFLAGSGDLSYGGVLIAAIAGA 67

Query: 61  LIADYCWYLAGRRYGRQIMSRLCRISLSPDSCVRQTESIYLRWGARSLLLAKFIPGFASI 120
           ++ D C Y  GR  G  +++R  ++   P   + Q    + + GA ++   +F+      
Sbjct: 68  VLGDSCGYWVGRWGGWPLLTRAAQLFNIPQEKLDQARHKFSQNGAAAVFFGRFVTLLRIF 127

Query: 121 ASALSGTMGTRRISFLLWDAAGSALWAG----LGIFLGSLFSSAVDDLLNVLAQLGHYGM 176
           A  ++G +      FLL++  G+++WA     L  FLG + +  ++ ++    Q   + +
Sbjct: 128 AGPMAGIVRMPYGKFLLYNIGGASVWAAITVSLAYFLGRVVT--IEQIIAWTTQFSWFAL 185

Query: 177 LMIAVALAAFVANKWWQRRRFRKSLE 202
             +   +  +    + Q +RF +++E
Sbjct: 186 AAVVGMVGIYFVFHFLQ-KRFDQTIE 210