BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0003.0103.p         (67 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2223 [L] COG1722 Exonuclease VII small subunit Rso Ralstonia ...    79   2e-15

>RSc2223 [L] COG1722 Exonuclease VII small subunit Rso Ralstonia
          solanacearum
          Length = 94

 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 48/57 (84%)

Query: 1  MEELEQLVARMEAGELPLEASVAAYKRGSELVKFCAGQLDKVDSQVKLLEGDMLKPF 57
          M ELE LVA ME+GELPLEAS+AAY+RG+ELV++C   L++V+ QV++L+GD LKP 
Sbjct: 27 MAELETLVASMESGELPLEASLAAYRRGAELVRYCQQVLERVEQQVRVLDGDALKPL 83