BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0018.p (263 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value MJ0412 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 275 9e-74 MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 270 3e-72 AGc259 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 251 1e-66 SMc02346 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate tran... 240 2e-63 sll1082 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans... 238 1e-62 >MJ0412 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mja Methanococcus jannaschii Length = 267 Score = 275 bits (702), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 125/247 (50%), Positives = 183/247 (74%), Gaps = 2/247 (0%) Query: 4 IELNDIVKVFKDRKRGTDMLAIDHVSLRLEKKEFLCLLGPSGCGKSTLLNMIAGFEFPTN 63 +++ ++ K+F+ G + A+D+++L + + EFL ++GPSGCGK+TLL +IAG ++PT Sbjct: 17 LKVENLTKIFE--FNGNRVKALDNINLEVYENEFLTVMGPSGCGKTTLLRIIAGLDYPTE 74 Query: 64 GVVTVAGKPITGPGADRGMVFQQANLMPWLPVWDNVAFSLKLQGKSAAERRAAAQPFIET 123 G V + GK + GPGADRG+VFQQ LMPW V NV F L+L+G ER A+ FI+ Sbjct: 75 GKVLLDGKEVKGPGADRGVVFQQYTLMPWRTVLKNVTFGLELKGIPKNERIEIAKKFIKM 134 Query: 124 VKLKGFENHYPSELSGGMAQRVGIARALLQNPSVILMDEPFAALDAQTKMEMQEELVALW 183 V L+GFE+ YP +LSGGM QRV IAR L +P ++LMDEPFAALDAQT+ +Q EL+ +W Sbjct: 135 VGLEGFEDAYPYQLSGGMQQRVAIARTLANDPEIVLMDEPFAALDAQTRNILQNELLKIW 194 Query: 184 QRYEGTIVFVTHSVDEALILATKVAVMTHRPGRMRELIDIDLPRPRDTTTPEFNQYKRHV 243 Q+ + T+ FVTHSVDEA+ L+ +V V+T RPGR++E++ IDL RPRD T+ EF +Y++ + Sbjct: 195 QKEKKTVFFVTHSVDEAVYLSDRVVVLTARPGRIKEIVKIDLERPRDRTSIEFLEYRKKI 254 Query: 244 LSLIREE 250 L+++++E Sbjct: 255 LNILKDE 261 >MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mac Methanosarcina acetivorans str.C2A Length = 268 Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 123/250 (49%), Positives = 174/250 (69%) Query: 1 MAFIELNDIVKVFKDRKRGTDMLAIDHVSLRLEKKEFLCLLGPSGCGKSTLLNMIAGFEF 60 M + + ++ +VF ++ + A+ ++S ++ EF+CLLGPSGCGK+TLL + AG E Sbjct: 15 MGRVSVKNVSRVFSKKEDESGTEALHNISFDVQDGEFICLLGPSGCGKTTLLRIAAGLET 74 Query: 61 PTNGVVTVAGKPITGPGADRGMVFQQANLMPWLPVWDNVAFSLKLQGKSAAERRAAAQPF 120 T+G +T+ G PITGP RGMVFQQ +L PW V DN+ F L++QG +E R + + Sbjct: 75 LTSGEITLNGVPITGPDPKRGMVFQQYSLFPWRTVIDNITFGLEMQGIKKSEARKQVEKY 134 Query: 121 IETVKLKGFENHYPSELSGGMAQRVGIARALLQNPSVILMDEPFAALDAQTKMEMQEELV 180 +E V L F+N YP ELSGGM QR IARAL P V+LMDEPF ALDAQT+ +Q+EL+ Sbjct: 135 LELVGLGQFKNSYPHELSGGMQQRAAIARALANEPEVLLMDEPFGALDAQTRNVLQDELL 194 Query: 181 ALWQRYEGTIVFVTHSVDEALILATKVAVMTHRPGRMRELIDIDLPRPRDTTTPEFNQYK 240 +W++ T +FVTHSVDEA+ L+ ++ VMT RPGR++E++ ++LPRPR T+PE N+ + Sbjct: 195 KIWEQKHVTFLFVTHSVDEAVFLSDRIVVMTSRPGRVKEIVSVELPRPRSRTSPEVNRLR 254 Query: 241 RHVLSLIREE 250 HVL L+ EE Sbjct: 255 DHVLKLLEEE 264 >AGc259 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 266 Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 117/259 (45%), Positives = 173/259 (66%), Gaps = 3/259 (1%) Query: 1 MAFIELNDIVKVFKDRKRGTDMLAIDHVSLRLEKKEFLCLLGPSGCGKSTLLNMIAGFEF 60 M+ + + + + F + G LA+ +L + + +F+ +LGPSGCGKSTLL +IAG + Sbjct: 6 MSELVIKGVSRTFPGVQGGQPTLALQPTNLEIPRNDFVTILGPSGCGKSTLLRIIAGLDR 65 Query: 61 PTNGVVTVAGKPITGPGADRGMVFQQANLMPWLPVWDNVAFSLKLQGKSAAERRAAAQPF 120 PT G V ++GK +TGPGADRGMVFQ L PWL + +NVAF L+ +G + E+ + Sbjct: 66 PTTGEVLLSGKAVTGPGADRGMVFQSYTLFPWLTIRENVAFGLRERGVAEKEKWEIVDSY 125 Query: 121 IETVKLKGFENHYPSELSGGMAQRVGIARALLQNPSVILMDEPFAALDAQTKMEMQEELV 180 I+ V L+GFENH+P +LSGGM QR IARAL P ++L+DEPF ALD QT+ MQE L+ Sbjct: 126 IDKVGLRGFENHWPKQLSGGMQQRTAIARALANGPKILLLDEPFGALDNQTRGLMQELLL 185 Query: 181 ALWQRYEGTIVFVTHSVDEALILATKVAVMTHRPGRMRELIDIDLPRPRDTT---TPEFN 237 +W+R + T++FVTH ++EA+ +A++V M+ RPGR++ + +DLP PR T +PEF+ Sbjct: 186 GIWEREQKTVIFVTHDIEEAVFMASRVVTMSARPGRIKSITPVDLPHPRHYTIKASPEFS 245 Query: 238 QYKRHVLSLIREESALAHA 256 + + + IR E+ A A Sbjct: 246 ELRAKLTEEIRSEAIAAAA 264 >SMc02346 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Sme Sinorhizobium meliloti Length = 278 Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 124/275 (45%), Positives = 174/275 (63%), Gaps = 12/275 (4%) Query: 1 MAFIELNDIVKVFK---------DRKRGTDMLAIDHVSLRLEKKEFLCLLGPSGCGKSTL 51 M I +N + K F D + +D V L +++ EF+ L+GPSG GKS L Sbjct: 1 MERIAVNGVCKTFTLKPGQTVTVDGVTSNRIAVLDGVDLSIDRGEFITLVGPSGSGKSVL 60 Query: 52 LNMIAGFEFPTNGVVTVAGKPITGPGADRGMVFQQANLMPWLPVWDNVAFSLKLQGKSAA 111 L++IAG T+GV ++ G ++ P A VFQQ L PW NV ++L+++G AA Sbjct: 61 LDVIAGLTGATSGVASIDGIEVSKPHARTAYVFQQYALFPWRTALQNVEYALEVRGVPAA 120 Query: 112 ERRAAAQPFIETVKLKGFENHYPSELSGGMAQRVGIARALLQNPSVILMDEPFAALDAQT 171 ERR A+ F+ L GFE+ +PS+LSGGM QRV IARAL +P V+LMDEPFAALDAQT Sbjct: 121 ERREKARHFLHLFGLNGFEDRFPSQLSGGMQQRVAIARALSTDPQVLLMDEPFAALDAQT 180 Query: 172 KMEMQEELVALWQRYEGTIVFVTHSVDEALILATKVAVMTHRPGRMRELIDIDLPRPRD- 230 + +Q EL+ +W++ + T+VFVTHS+DEA+ LA +V VMT RP R++E+++IDLPRPRD Sbjct: 181 RDILQSELLRIWEQIKTTVVFVTHSIDEAIYLADRVVVMTARPARVKEIVEIDLPRPRDL 240 Query: 231 --TTTPEFNQYKRHVLSLIREESALAHADAALLAA 263 FN Y+ V +R+E + A D AL ++ Sbjct: 241 DIRNGEAFNAYRGRVWESLRDEVSKAQRDWALASS 275 >sll1082 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Syn Synechocystis Length = 266 Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 120/254 (47%), Positives = 169/254 (66%), Gaps = 11/254 (4%) Query: 4 IELNDIVKVFKDRKRGTDMLAIDHVSLRLEKKEFLCLLGPSGCGKSTLLNMIAGFEFPTN 63 +E+ D+ +VF KRG+ ++A+ ++++ +E EF+C +G SG GKSTLL +IAG + PT+ Sbjct: 3 LEITDLNRVFVG-KRGS-VVALKNINMHIETGEFVCAVGASGSGKSTLLRLIAGLDTPTS 60 Query: 64 GVVTVAGKPITGPGADRGMVFQQANLMPWLPVWDNVAFSLKLQGKSAAERRAAAQPFIET 123 G + V G+ +TGPGADRGMVFQ +L PW+ V NV F LKLQG S ER A +++ Sbjct: 61 GTINVDGQRVTGPGADRGMVFQHYSLFPWMTVRQNVEFGLKLQGCSQKERFDTASYYLDV 120 Query: 124 VKLKGFENHYPSELSGGMAQRVGIARALLQNPSVILMDEPFAALDAQTKMEMQEELVALW 183 V L F YP ELSGGM QRV IAR+L +P V+LMDEPF ALD QTK M E L+ +W Sbjct: 121 VGLINFSEAYPRELSGGMKQRVAIARSLACHPKVLLMDEPFGALDIQTKERMHEYLIDIW 180 Query: 184 QRYEGTIVFVTHSVDEALILATKVAVMTHRPGRMRELIDIDLP----RPRDTT-----TP 234 QR + +I+ +TH V+EA+ LA +V V++ RPG ++ + I+LP P++ T P Sbjct: 181 QRLQCSILMITHDVEEAVFLAQRVYVLSSRPGTIQRELTINLPGDEETPKNRTYKIKREP 240 Query: 235 EFNQYKRHVLSLIR 248 EF +Y + SL+R Sbjct: 241 EFFKYSDEISSLLR 254