BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0230.p         (69 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA2214 [GEPR] COG0477 Permeases of the major facilitator superfa...    83   2e-16
RSc2352 [GEPR] COG0477 Permeases of the major facilitator superf...    78   4e-15
YPO2237 [GEPR] COG0477 Permeases of the major facilitator superf...    76   2e-14
RSp0182 [GEPR] COG0477 Permeases of the major facilitator superf...    72   3e-13
RSp1572 [GEPR] COG0477 Permeases of the major facilitator superf...    72   3e-13

>PA2214 [GEPR] COG0477 Permeases of the major facilitator superfamily Pae
           Pseudomonas aeruginosa
          Length = 440

 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 39/55 (70%), Positives = 41/55 (74%)

Query: 4   FSRIMVLWGLASVGMMAVSDATHFYVLRFLLGVFEAGFFPGIVLYLSYWFPARRR 58
             RIMV WGL S  MM   DA  FYVLRFLLGV EAGFFPGI+LYL+YWFP R R
Sbjct: 89  LCRIMVTWGLVSAAMMFADDAMTFYVLRFLLGVAEAGFFPGIILYLTYWFPQRSR 143


>RSc2352 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso
           Ralstonia solanacearum
          Length = 442

 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 35/54 (64%), Positives = 43/54 (79%)

Query: 5   SRIMVLWGLASVGMMAVSDATHFYVLRFLLGVFEAGFFPGIVLYLSYWFPARRR 58
           +RIM+ WGL S  MM V+    FYV+RFLLG+ EAGFFPGI+LYL+YW+PA RR
Sbjct: 103 ARIMISWGLISAAMMFVTTPAMFYVMRFLLGLAEAGFFPGIILYLTYWYPAERR 156


>YPO2237 [GEPR] COG0477 Permeases of the major facilitator superfamily Ype
           Yersinia pestis
          Length = 436

 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/54 (62%), Positives = 42/54 (77%)

Query: 5   SRIMVLWGLASVGMMAVSDATHFYVLRFLLGVFEAGFFPGIVLYLSYWFPARRR 58
           +RIM+ WG+ S  M  V+    FYV+RFLLGV EAGFFPGI+LY+SYWFP+ RR
Sbjct: 97  ARIMITWGIISACMAFVTTPMSFYVMRFLLGVAEAGFFPGIILYISYWFPSHRR 150


>RSp0182 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso
           Ralstonia solanacearum
          Length = 453

 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/59 (59%), Positives = 42/59 (71%)

Query: 5   SRIMVLWGLASVGMMAVSDATHFYVLRFLLGVFEAGFFPGIVLYLSYWFPARRRVATAA 63
           +RI+V WGL ++G   V  AT  Y LRFLLGV EAGFFPGI++YL+YWF AR    T A
Sbjct: 105 ARILVTWGLVAMGSAFVQSATQLYALRFLLGVAEAGFFPGIIVYLTYWFRARELATTVA 163


>RSp1572 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso
           Ralstonia solanacearum
          Length = 433

 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 31/55 (56%), Positives = 41/55 (74%)

Query: 3   SFSRIMVLWGLASVGMMAVSDATHFYVLRFLLGVFEAGFFPGIVLYLSYWFPARR 57
           + SRI++LWG+ S  M+ V+D   FY LRFLLGVFEAGF PG++ YL+ W+P  R
Sbjct: 93  TLSRILILWGIVSASMLFVTDVWTFYALRFLLGVFEAGFAPGMIYYLTQWYPGER 147