BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0164.p (239 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0703 [R] COG0220 Predicted S-adenosylmethionine-dependent met... 316 3e-86 NMB1328 [R] COG0220 Predicted S-adenosylmethionine-dependent met... 265 6e-71 NMA1542 [R] COG0220 Predicted S-adenosylmethionine-dependent met... 264 1e-70 STM3109 [R] COG0220 Predicted S-adenosylmethionine-dependent met... 255 6e-68 YPO0951 [R] COG0220 Predicted S-adenosylmethionine-dependent met... 249 5e-66 >RSc0703 [R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase Rso Ralstonia solanacearum Length = 251 Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 155/224 (69%), Positives = 173/224 (77%), Gaps = 4/224 (1%) Query: 17 RRIRSFVTRAGRVSVAQGRALEELGPRFLVPYDKAPLDLAVTFGRQ-APTILEIGFGMGE 75 RRIRSFV RAGR S Q RA++ELGPRFL+PY APLD FGR A I EIGFGMGE Sbjct: 30 RRIRSFVRRAGRTSTGQQRAIDELGPRFLLPYAAAPLDWEAAFGRTGARRIFEIGFGMGE 89 Query: 76 TSAKISALMPEKNFIGVEVHTPGVGSYLKLIGEGNLDNVRIIQHDAVEVLTNMIAPDSLA 135 TSA I+ L P+ +F+GVEVH PGVG+ LKLIGE + NVRI+ HDAVEVL MI +L Sbjct: 90 TSAHIAQLRPDDDFLGVEVHEPGVGALLKLIGERGIGNVRIVSHDAVEVLAQMIPEGTLD 149 Query: 136 GVHVFFPDPWHKARHNKRRLIQSPLVQLISTRLAPGGYLHCATDWEEYAIQMLEVLSAEP 195 G+HVFFPDPWHK RHNKRRLIQ P V ++ L PGGYLHCATDWEEYA QMLEVLSAEP Sbjct: 150 GIHVFFPDPWHKKRHNKRRLIQGPFVARLAAHLRPGGYLHCATDWEEYAHQMLEVLSAEP 209 Query: 196 TLKNTATDPSGYVPRPEYRDTTKFENRGLRLGHGVWDLVFEKRA 239 L+NTA G+ PRP+YR TKFE RGLRLGHGVWD+VF KRA Sbjct: 210 LLENTA---DGFAPRPDYRPVTKFEKRGLRLGHGVWDVVFRKRA 250 >NMB1328 [R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase Nme Neisseria meningitidis MC58 Length = 238 Score = 265 bits (678), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 124/221 (56%), Positives = 160/221 (72%), Gaps = 3/221 (1%) Query: 17 RRIRSFVTRAGRVSVAQGRALEELGPRFLVPYDKAPLDLAVTFGRQAPTILEIGFGMGET 76 R IRSFV R ++ AQ RA++ L F + Y P DL FG P ILEIGFGMG Sbjct: 19 RSIRSFVLRQSHMTAAQQRAIDTLWDSFGIDYQATPADLDARFGSSRPKILEIGFGMGTA 78 Query: 77 SAKISALMPEKNFIGVEVHTPGVGSYLKLIGEGNLDNVRIIQHDAVEVLTNMIAPDSLAG 136 +A+I+ +PE +F+ ++VH PGVG+ LKLI E +L+N+R+++HDAVEV+ NM+ SL G Sbjct: 79 TAEIARRLPETDFLAIDVHGPGVGNLLKLIDENHLENIRVMRHDAVEVVENMLQDGSLDG 138 Query: 137 VHVFFPDPWHKARHNKRRLIQSPLVQLISTRLAPGGYLHCATDWEEYAIQMLEVLSAEPT 196 +H+FFPDPWHK RH+KRRLIQ+P + + +L GGY+H ATDWEEYA QMLEVLS+ + Sbjct: 139 IHIFFPDPWHKKRHHKRRLIQAPFIAKLLPKLKTGGYIHLATDWEEYAQQMLEVLSSFDS 198 Query: 197 LKNTATDPSGYVPRPEYRDTTKFENRGLRLGHGVWDLVFEK 237 L+NTA D Y P P+YR TKFE RG RLGHGVWDLVF++ Sbjct: 199 LQNTAAD---YAPTPDYRPETKFEARGKRLGHGVWDLVFKR 236 >NMA1542 [R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase NmA Neisseria meningitidis Z2491 Length = 238 Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 124/221 (56%), Positives = 160/221 (72%), Gaps = 3/221 (1%) Query: 17 RRIRSFVTRAGRVSVAQGRALEELGPRFLVPYDKAPLDLAVTFGRQAPTILEIGFGMGET 76 R IRSFV R ++ AQ RA++ L F + Y P DL FG P ILEIGFGMG Sbjct: 19 RSIRSFVLRQSHMTAAQQRAIDTLWGSFGIDYQATPADLDARFGSSRPKILEIGFGMGTA 78 Query: 77 SAKISALMPEKNFIGVEVHTPGVGSYLKLIGEGNLDNVRIIQHDAVEVLTNMIAPDSLAG 136 +A+I+ +PE +F+ ++VH PGVG+ LKLI E +L+N+R+++HDAVEV+ NM+ SL G Sbjct: 79 TAEIARRLPETDFLAIDVHGPGVGNLLKLIEENHLENIRVMRHDAVEVVENMLQDGSLDG 138 Query: 137 VHVFFPDPWHKARHNKRRLIQSPLVQLISTRLAPGGYLHCATDWEEYAIQMLEVLSAEPT 196 +H+FFPDPWHK RH+KRRLIQ+P + + +L GGY+H ATDWEEYA QMLEVLS+ + Sbjct: 139 IHIFFPDPWHKKRHHKRRLIQAPFIAKLLPKLKTGGYIHLATDWEEYAQQMLEVLSSFDS 198 Query: 197 LKNTATDPSGYVPRPEYRDTTKFENRGLRLGHGVWDLVFEK 237 L+NTA D Y P P+YR TKFE RG RLGHGVWDLVF++ Sbjct: 199 LQNTAAD---YAPTPDYRPETKFEARGKRLGHGVWDLVFKR 236 >STM3109 [R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase Sty Salmonella typhimurium LT2 Length = 239 Score = 255 bits (652), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 124/234 (52%), Positives = 163/234 (69%), Gaps = 7/234 (2%) Query: 4 NKSGKPLFYDPSERRIRSFVTRAGRVSVAQGRALEELGPRFLVPYDKAPLDLAVTFGRQA 63 +++G+PL RRIRSFV R GR++ Q ALE P V + +AP+D A FGR+A Sbjct: 11 DENGRPL------RRIRSFVRRQGRLTKGQEHALENYWPVMGVEFSEAPVDFATLFGREA 64 Query: 64 PTILEIGFGMGETSAKISALMPEKNFIGVEVHTPGVGSYLKLIGEGNLDNVRIIQHDAVE 123 P LEIGFGMG + ++ PE+NF+G+EVH+PGVG+ L E ++N+R++ HDAVE Sbjct: 65 PVTLEIGFGMGASLVAMAKARPEQNFLGIEVHSPGVGACLASANEEGVENLRVMCHDAVE 124 Query: 124 VLTNMIAPDSLAGVHVFFPDPWHKARHNKRRLIQSPLVQLISTRLAPGGYLHCATDWEEY 183 VL MI +SL+ V +FFPDPWHKARHNKRR++Q P +L+ ++L GG H ATDWE Y Sbjct: 125 VLHKMIPDNSLSMVQLFFPDPWHKARHNKRRIVQVPFAELVLSKLKLGGVFHMATDWEAY 184 Query: 184 AIQMLEVLSAEPTLKNTATDPSGYVPRPEYRDTTKFENRGLRLGHGVWDLVFEK 237 A MLEV+S+ KN ++ + YVPRPE R TKFE RG RLGHGVWDL+FE+ Sbjct: 185 AEHMLEVMSSIDGYKNL-SESNDYVPRPESRPVTKFEQRGHRLGHGVWDLMFER 237 >YPO0951 [R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase Ype Yersinia pestis Length = 239 Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 120/222 (54%), Positives = 155/222 (69%), Gaps = 1/222 (0%) Query: 17 RRIRSFVTRAGRVSVAQGRALEELGPRFLVPYDKAPLDLAVTFGRQAPTILEIGFGMGET 76 RRIRSFV R GR++ Q AL+ P V Y AP+DL FGR+AP +LEIGFGMG + Sbjct: 18 RRIRSFVRRQGRLTKGQQLALDSYWPVMGVEYQAAPVDLNTLFGREAPIVLEIGFGMGTS 77 Query: 77 SAKISALMPEKNFIGVEVHTPGVGSYLKLIGEGNLDNVRIIQHDAVEVLTNMIAPDSLAG 136 ++ P++NF+G+EVH+PGVG+ L + L N+RI+ HDAVEVL NMI SL Sbjct: 78 LVTMATNNPQQNFLGIEVHSPGVGACLSSAHDAGLSNLRIMCHDAVEVLENMIPEASLDM 137 Query: 137 VHVFFPDPWHKARHNKRRLIQSPLVQLISTRLAPGGYLHCATDWEEYAIQMLEVLSAEPT 196 V +FFPDPWHKARHNKRR++Q+P V+L+ ++L GG H ATDW+ YA MLEV+S Sbjct: 138 VQLFFPDPWHKARHNKRRIVQTPFVELVKSKLKVGGVFHMATDWQPYAEHMLEVMSGVSG 197 Query: 197 LKNTATDPSGYVPRPEYRDTTKFENRGLRLGHGVWDLVFEKR 238 N ++ + YVPRP+ R TKFE RG RLGHGVWDL+FE++ Sbjct: 198 YLNL-SEQNDYVPRPDSRPLTKFELRGQRLGHGVWDLMFERK 238