BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0088.p (339 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMa2117_2 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH re... 238 1e-62 SMa1500_2 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH re... 233 3e-61 PA3498 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reduc... 219 1e-56 CC2394 Non COG 214 2e-55 PA4905 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reduc... 211 2e-54 >SMa2117_2 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Sme Sinorhizobium meliloti Length = 312 Score = 238 bits (608), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 136/323 (42%), Positives = 184/323 (56%), Gaps = 12/323 (3%) Query: 16 LRLRVRAVRHAAEGIRLFELVAQEGAALPPWTPGAHLRLHLQDGLVRAYSLCNTPQQRDC 75 +R++V A+GI F+L G LP + PGAH+ +HL +GLVR YSL N P + DC Sbjct: 1 IRVQVARKWQTADGIMAFQLRPVRGL-LPTFQPGAHIDVHLPNGLVRQYSLTNGPGETDC 59 Query: 76 YVIAVKRESDSRGGSAFLHEQVQEGMAISASPPVNAFPLIADSRAPLLLAAGIGITPLHA 135 + I VK + SRGGS LH+ V+EG ++ S P N FPL D+ + +A GIG+TPL A Sbjct: 60 FTIGVKLDPASRGGSQCLHDSVREGDVLAISEPRNNFPLRRDALKTIFVAGGIGVTPLLA 119 Query: 136 MAAEMAAQGRRHRLHYFARSLAHAAFFHELAACSQGMSLHLGLDGIETERAIAAALVAVP 195 MA + Q + LHYFA++ AF A + HLGL +T + + L A Sbjct: 120 MAQTLNNQSLDYELHYFAQNEQQLAFSECRQALGDAVKPHLGLSPGDTVKELRRLLSAYL 179 Query: 196 SSSPLYVCGPAPFIEAARRHAQLAGWREQDVHFELFAAPLMANAEPPSAAQAQAEEHVFE 255 + LYVCGP P +E+ R A AGW E VHFE F + + + FE Sbjct: 180 PDTQLYVCGPGPMLESTRSLAAEAGWPEAAVHFEYFKNTNVID-----------DSSSFE 228 Query: 256 LVLHRSGLRCEVQPGQSIVAAAAQVGVVIGTSCGEGFCGSCESTVLEGQPLHCDSVLSDA 315 + L RS L +V GQSI+ A + GV + +SC +G CG+C +TV+EG+P H D LS + Sbjct: 229 VALARSCLTIKVAAGQSILEAMREAGVDLPSSCEQGACGTCLATVIEGEPDHQDVYLSPS 288 Query: 316 ERASGRRILPCVSRCAGTRLVLD 338 ERASG +I+ CVSR RLVLD Sbjct: 289 ERASGTKIMTCVSRSKSARLVLD 311 >SMa1500_2 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Sme Sinorhizobium meliloti Length = 312 Score = 233 bits (595), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 131/324 (40%), Positives = 182/324 (56%), Gaps = 12/324 (3%) Query: 16 LRLRVRAVRHAAEGIRLFELVAQEGAALPPWTPGAHLRLHLQDGLVRAYSLCNTPQQRDC 75 +R+ V AA+GI FEL +G LP + PGAH+ +H+ +GL+R YS+ N P + D Sbjct: 1 IRVTVARKWMAADGIAAFELRPIKGL-LPTFQPGAHIDVHMPNGLIRQYSITNGPGESDS 59 Query: 76 YVIAVKRESDSRGGSAFLHEQVQEGMAISASPPVNAFPLIADSRAPLLLAAGIGITPLHA 135 YVI VK E +S+GGS +HE ++ G ++ S P N FPL D+ + +A GIG TPL A Sbjct: 60 YVIGVKLERESKGGSRCMHETLRAGDVLAISEPRNNFPLRRDAEKTIFVAGGIGATPLIA 119 Query: 136 MAAEMAAQGRRHRLHYFARSLAHAAFFHELAACSQGMSLHLGLDGIETERAIAAALVAVP 195 MA + Q HYFA++ A AF + A + + LGLD TE + L Sbjct: 120 MAQALKNQSLDFAFHYFAQNQAQLAFPEKTALLGEALKPQLGLDPEGTEAKLKDILSGYR 179 Query: 196 SSSPLYVCGPAPFIEAARRHAQLAGWREQDVHFELFAAPLMANAEPPSAAQAQAEEHVFE 255 +Y+CGP P +EAARR A GW E VHFE F + FE Sbjct: 180 PGMHVYLCGPGPMLEAARRIAAEVGWPETAVHFEYF-----------KNTNTIDDSSSFE 228 Query: 256 LVLHRSGLRCEVQPGQSIVAAAAQVGVVIGTSCGEGFCGSCESTVLEGQPLHCDSVLSDA 315 + L RS + +V G++I+ +VG+ + +SC +G CG+C +TV+EG+P H D L+DA Sbjct: 229 VALARSCVTFKVPAGRTILDVMREVGIDMPSSCEQGACGTCLATVIEGEPDHQDVYLNDA 288 Query: 316 ERASGRRILPCVSRCAGTRLVLDL 339 ER SG +I+ CVSR RLVLDL Sbjct: 289 ERKSGTKIMTCVSRAKSARLVLDL 312 >PA3498 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Pae Pseudomonas aeruginosa Length = 318 Score = 219 bits (557), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 135/320 (42%), Positives = 183/320 (57%), Gaps = 12/320 (3%) Query: 20 VRAVRHAAEGIRLFELVAQEGAALPPWTPGAHLRLHLQDGLVRAYSLCNTPQQRDCYVIA 79 V +R A+GI EL Q PP++ GAH+ LHL +GLVR+YSL N+P+ YV+ Sbjct: 11 VHTLRFEAQGILGVELRPQGDQVFPPFSAGAHIDLHLPNGLVRSYSLLNSPEDCGRYVLG 70 Query: 80 VKRESDSRGGSAFLHEQVQEGMAISASPPVNAFPLIADSRAPLLLAAGIGITPLHAMAAE 139 + R+ SRGGSAF+H+ ++ GM + S P N FPL ++ +L+A GIG+TP++ M Sbjct: 71 ILRDRGSRGGSAFVHDSLRVGMQLQISRPRNLFPLEENAAHSVLVAGGIGVTPIYCMFNR 130 Query: 140 MAAQGRRHRLHYFARSLAHAAFFHELAACSQGMSLHLGLDGIETERAIAAALVAVPSSSP 199 + A GR L Y ARS AAF ELAA + LH D + A L A S++ Sbjct: 131 LRALGRSVELLYCARSRQEAAFVEELAASDAAIQLHFD-DEKGGPMDLGAFLGARASTAH 189 Query: 200 LYVCGPAPFIEAARRHAQLAGWREQDVHFELFAAPLMANAEPPSAAQAQAEEHVFELVLH 259 Y CGP P I+A H + G VH E FAA A A P + +E+ L Sbjct: 190 FYCCGPTPMIDAFETHCERLG--HPHVHIERFAAAPQAPAAPQGS---------YEVRLA 238 Query: 260 RSGLRCEVQPGQSIVAAAAQVGVVIGTSCGEGFCGSCESTVLEGQPLHCDSVLSDAERAS 319 RSG EV G+S++ A + GV + SC EG CGSCE+ VLEG+P H D VL+ AE+ + Sbjct: 239 RSGTSIEVPSGKSLLDALLEAGVAVDCSCREGVCGSCETRVLEGEPEHRDGVLTKAEKIA 298 Query: 320 GRRILPCVSRCAGTRLVLDL 339 + ++ CVS C G+RLVLDL Sbjct: 299 NQTMMVCVSGCKGSRLVLDL 318 >CC2394 Non COG Length = 316 Score = 214 bits (546), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 131/326 (40%), Positives = 173/326 (53%), Gaps = 13/326 (3%) Query: 16 LRLRVRAVRHAAEGIRLFELVAQEGAALPPWTPGAHLRLHLQDGLVRAYSLCNTPQQRDC 75 +++RV + AAEGI +LV EG LP + GAH+ L L +GL R YSLC+ P +R Sbjct: 2 IKVRVASRARAAEGIAQLDLVCAEGRDLPAFEAGAHIDLFLGNGLTRQYSLCSDPAERSF 61 Query: 76 YVIAVKRESDSRGGSAFLHEQVQEGMAISASPPVNAFPLIADSRAPLLLAAGIGITPLHA 135 Y IAV RE SRGGSA++HE + EG + SPP N F L + LL A G+G+TP+ A Sbjct: 62 YRIAVLRELTSRGGSAYVHEALTEGATLEISPPRNLFALDETAEEHLLFAGGVGVTPILA 121 Query: 136 MAAEMAAQGRRHRLHYFARSLAHAAFFHELAACSQGMSLHLGLDG-IETERAIAAALVAV 194 MA ++A GR HY AR + AAF +EL+ ++ L D +T + AL Sbjct: 122 MAKRLSALGRAFTFHYCARDRSRAAFLNELSTAPFTSAVRLSFDAEPDTRLDLDVALARP 181 Query: 195 PSSSPLYVCGPAPFIEAARRHAQLAGWREQDVHFELF-AAPLMANAEPPSAAQAQAEEHV 253 LYVCGP F+ A GW + E F AAPL A + P Sbjct: 182 KPGRRLYVCGPGGFMTHVIDGALARGWSGDQIRKEHFAAAPLSAGQDQP----------- 230 Query: 254 FELVLHRSGLRCEVQPGQSIVAAAAQVGVVIGTSCGEGFCGSCESTVLEGQPLHCDSVLS 313 FELV+ SG V Q+ A GV + SC +G CG+C + V++GQP H D+ + Sbjct: 231 FELVIASSGQIVTVAADQTAAQALEAAGVFVPVSCEQGVCGTCLTRVIDGQPDHRDAFQT 290 Query: 314 DAERASGRRILPCVSRCAGTRLVLDL 339 D ERA+ + PC SR RLVLDL Sbjct: 291 DEERAANDQFTPCCSRARSPRLVLDL 316 >PA4905 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Pae Pseudomonas aeruginosa Length = 317 Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 133/322 (41%), Positives = 176/322 (54%), Gaps = 12/322 (3%) Query: 20 VRAVRHAAEGIRLFELVAQEGAALPPWTPGAHLRLHLQDGLVRAYSLCNTPQQRDCYVIA 79 V A+R A+ I FEL +GAALP + PGAH+ LHL +GLVR YSLC ++ Y IA Sbjct: 6 VGAIRLEAQDIHSFELFRADGAALPSFEPGAHIDLHLPNGLVRQYSLCGPAERPRHYRIA 65 Query: 80 VKRESDSRGGSAFLHEQVQEGMAISASPPVNAFPLIADSRAPLLLAAGIGITPLHAMAAE 139 V R DSRGGSA LH +++ G + P N FPL + LL A GIGITPL AMA Sbjct: 66 VLRCRDSRGGSATLHAELRVGQRLHIGEPRNLFPLSPEPGPHLLFAGGIGITPLLAMAER 125 Query: 140 MAAQGRRHRLHYFARSLAHAAFFHELAACSQGMSLHLGLDGIETER--AIAAALVAVPSS 197 +A G +LHY A S AAF L C+ +H D E+ R + A L P Sbjct: 126 LARDGADFQLHYCAHSGERAAFVDYLGRCAFADRVHCHFDHGESSRRADLRALLATSPRD 185 Query: 198 SPLYVCGPAPFIEAARRHAQLAGWREQDVHFELFAAPLMANAEPPSAAQAQAEEHVFELV 257 + LY+CGPA F++ A+ GW +H E FAA A + + + FE+ Sbjct: 186 AQLYLCGPAGFMQWIEESARELGWEASRLHREHFAA----------APRDASADGTFEVQ 235 Query: 258 LHRSGLRCEVQPGQSIVAAAAQVGVVIGTSCGEGFCGSCESTVLEGQPLHCDSVLSDAER 317 L +G V GQ+++AA + GV + SC +G CG+C + VL+G+P H D LS+ E+ Sbjct: 236 LASNGALIRVAAGQTVLAALREAGVDLPASCEQGICGTCLTRVLDGEPEHRDLYLSEEEQ 295 Query: 318 ASGRRILPCVSRCAGTRLVLDL 339 A+ PC SR RLVLDL Sbjct: 296 AANDCFTPCCSRSRSPRLVLDL 317