BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0043.p         (154 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2798 [S] COG4731 Uncharacterized protein conserved in bacteri...   147   1e-35
TP0594 [S] COG4731 Uncharacterized protein conserved in bacteria...    60   1e-09

>RSc2798 [S] COG4731 Uncharacterized protein conserved in bacteria Rso
           Ralstonia solanacearum
          Length = 152

 Score =  147 bits (370), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 68/125 (54%), Positives = 96/125 (76%), Gaps = 3/125 (2%)

Query: 31  SPVGLWKSIDDATGKPKALIRISENNGELSGKIEKLFRAPEEDQNPVCQKCEGELKDKPV 90
           SP G WK+IDDATGKPK  ++I E +G  SG++  + +  EED+  VC KC  + KD+P+
Sbjct: 30  SPAGTWKTIDDATGKPKGEVQIVEKDGVFSGRVTNILK--EEDRAKVCTKCTDDRKDQPI 87

Query: 91  IGMTILSGLKKDGE-EYNGGQIIDPANGKVYKSKLTVVDDGQKLNVRGYVGMPMLGRTQT 149
           +G+TIL  LKK G+ E+ GG I+DP NGKVY +K+++ +DG+KLNVRG++G+ +LGRTQT
Sbjct: 88  VGLTILKDLKKTGDNEWAGGNILDPENGKVYSAKMSLSEDGRKLNVRGFLGISLLGRTQT 147

Query: 150 WLREQ 154
           W+REQ
Sbjct: 148 WVREQ 152


>TP0594 [S] COG4731 Uncharacterized protein conserved in bacteria Tpa
           Treponema pallidum
          Length = 202

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 16/114 (14%)

Query: 34  GLWKSIDDATGKPKALIRISENNGELSGKIEKLF-RAPEEDQNPVCQKC---------EG 83
           G+WKS+DD TGKP  + R+   +G+L GKI     RAP    N     C         +G
Sbjct: 65  GIWKSVDDNTGKPTGVWRLYVQDGKLFGKILVCMGRAP----NAAVVSCTRTYPDFSKKG 120

Query: 84  ELKDKPVIGMTILSGLKKDGE-EYNGGQIIDPANGKVYKSKLTVVD-DGQKLNV 135
            + + P++G   +  L++     + GG +IDPA+GK Y  K+  +  DG+   V
Sbjct: 121 NVANMPLVGTPFIYNLERTSPGSWGGGYVIDPASGKYYYCKINFIPADGRSYKV 174