BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0038.p (313 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA1857 [S] COG2354 Uncharacterized protein conserved in bacteria... 417 e-116 STM1989 [S] COG2354 Uncharacterized protein conserved in bacteri... 326 4e-89 yedI [S] COG2354 Uncharacterized protein conserved in bacteria E... 323 4e-88 ECs2696 [S] COG2354 Uncharacterized protein conserved in bacteri... 322 7e-88 ZyedI [S] COG2354 Uncharacterized protein conserved in bacteria ... 319 6e-87 >PA1857 [S] COG2354 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 307 Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust. Identities = 220/311 (70%), Positives = 249/311 (80%), Gaps = 6/311 (1%) Query: 1 MAGSAFFALIDDIATVLDDVSLMTKVAAKKTAGVLGDDLALNAQQVAGVRAERELPVVWA 60 MAG++ L+DDIA VLDDVSLMTKVAAKKTAGVLGDDLALNAQQV GV A+RELPVVWA Sbjct: 1 MAGASLLTLLDDIAAVLDDVSLMTKVAAKKTAGVLGDDLALNAQQVTGVNADRELPVVWA 60 Query: 61 VAKGSLKNKAILVPAALAISAFIPWAVTPLLMLGGAFLCFEGFEKLAHKYLPHDDEHHEV 120 VAKGSL+NKAILVPAAL ISAF PWAV PLLMLGGA+LCFEGFEK+AHKYLPHDDEH + Sbjct: 61 VAKGSLRNKAILVPAALLISAFAPWAVIPLLMLGGAYLCFEGFEKIAHKYLPHDDEHADE 120 Query: 121 AAKAAEDVDPLVYEQEKIKDAVRTDFILSAEIIAITLGTVAGAPLQQQITVLVGIALIMT 180 AA AA +VD E++KI A+RTDFILSAEIIAITLGTVA + Q+ VLVGIAL+MT Sbjct: 121 AALAA-NVDVAALEKQKIGGAIRTDFILSAEIIAITLGTVAESSFTTQVLVLVGIALVMT 179 Query: 181 AGVYGLVAGIVKLDDGGLYLVQHAGASAWGRFKAGIGRAVLAAAPKMMRSLSVIGTIAMF 240 GVYGLVAGIVKLDD GLYL + F G+G A+L AP +M+ LSV+G AMF Sbjct: 180 IGVYGLVAGIVKLDDAGLYLSRRDSG-----FAQGLGGAILRTAPYLMKGLSVVGMAAMF 234 Query: 241 MVGGGILTHGLPFAHHAIEAAAQAVEAIAVVGPILGAITPAVLNALFGVVAGAVVLVVVK 300 MVGGGILTHG+P HHAIE AAQ+V IA +GP+L AITP +LN LFG+VAGAVVL V Sbjct: 235 MVGGGILTHGIPVVHHAIEQAAQSVAGIATLGPLLAAITPTLLNFLFGIVAGAVVLAGVL 294 Query: 301 LAQRVLSLFKK 311 L +R+L KK Sbjct: 295 LVKRLLPKKKK 305 >STM1989 [S] COG2354 Uncharacterized protein conserved in bacteria Sty Salmonella typhimurium LT2 Length = 303 Score = 326 bits (836), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 177/306 (57%), Positives = 221/306 (72%), Gaps = 19/306 (6%) Query: 1 MAGSAFFALIDDIATVLDDVSLMTKVAAKKTAGVLGDDLALNAQQVAGVRAERELPVVWA 60 MAGS+ L+DDIAT+LDD+S+M K+AAKKTAGVLGDDL+LNAQQV GVRA RELPVVW+ Sbjct: 1 MAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVTGVRANRELPVVWS 60 Query: 61 VAKGSLKNKAILVPAALAISAFIPWAVTPLLMLGGAFLCFEGFEKLAHKYLPHDDEHHEV 120 VAKGSL NK ILVP AL ISAFIPWA+TPLLMLGGAFLCFEG EK+ H + +H E Sbjct: 61 VAKGSLINKVILVPLALLISAFIPWAITPLLMLGGAFLCFEGVEKVLHTF--EARKHKED 118 Query: 121 AAKAAEDV------DPLVYEQEKIKDAVRTDFILSAEIIAITLGTVAGAPLQQQITVLVG 174 A+ + + +PL +E++K+K AVRTDFILSAEI+AITLG VA APL Q+ VL G Sbjct: 119 PAERQKRLEALAAQNPLAFEKDKVKGAVRTDFILSAEIVAITLGIVAQAPLLNQVLVLAG 178 Query: 175 IALIMTAGVYGLVAGIVKLDDGGLYLVQHAGASAWGRFKAGIGRAVLAAAPKMMRSLSVI 234 IAL++T GVYGLV IVKLDD G +L + A G+G+ +L AP +M++LS++ Sbjct: 179 IALVVTIGVYGLVGIIVKLDDMGYWLAEKRSVLA-----QGVGKGLLIIAPWLMKALSIV 233 Query: 235 GTIAMFMVGGGILTHGLPFAHHAIEAAAQAVEAIAVVGPILGAITPAVLNALFGVVAGAV 294 GT+AMF+VGGGI+ HG+ HHAIE AQ G + PA LN + G + GA+ Sbjct: 234 GTLAMFLVGGGIVVHGIAPLHHAIEHFAQQ------QGAFMAHTIPAGLNLVLGFIIGAI 287 Query: 295 VLVVVK 300 V+ +VK Sbjct: 288 VVALVK 293 >yedI [S] COG2354 Uncharacterized protein conserved in bacteria Eco Escherichia coli K12 Length = 305 Score = 323 bits (827), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 173/311 (55%), Positives = 225/311 (72%), Gaps = 19/311 (6%) Query: 1 MAGSAFFALIDDIATVLDDVSLMTKVAAKKTAGVLGDDLALNAQQVAGVRAERELPVVWA 60 +AGS+ L+DDIAT+LDD+S+M K+AAKKTAGVLGDDL+LNAQQV+GVRA RELPVVW Sbjct: 3 LAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWG 62 Query: 61 VAKGSLKNKAILVPAALAISAFIPWAVTPLLMLGGAFLCFEGFEKLAHKYLPHDDEHHEV 120 VAKGSL NK ILVP AL ISAFIPWA+TPLLM+GGAFLCFEG EK+ H + +H E Sbjct: 63 VAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLH--MLEARKHKED 120 Query: 121 AAKAAEDV------DPLVYEQEKIKDAVRTDFILSAEIIAITLGTVAGAPLQQQITVLVG 174 A++ + + DPL +E++KIK A+RTDFILSAEI+AITLG VA APL Q+ VL G Sbjct: 121 PAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSG 180 Query: 175 IALIMTAGVYGLVAGIVKLDDGGLYLVQHAGASAWGRFKAGIGRAVLAAAPKMMRSLSVI 234 IAL++T GVYGLV IVK+DD G +L + + A +G+ +L AP +M++LS++ Sbjct: 181 IALVVTVGVYGLVGVIVKIDDLGYWLAEKSSA-----LMQALGKGLLIIAPWLMKALSIV 235 Query: 235 GTIAMFMVGGGILTHGLPFAHHAIEAAAQAVEAIAVVGPILGAITPAVLNALFGVVAGAV 294 GT+AMF+VGGGI+ HG+ HHAIE A A+ + I P VLN + G + G + Sbjct: 236 GTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAM------ILPTVLNLILGFIIGGI 289 Query: 295 VLVVVKLAQRV 305 V++ VK +++ Sbjct: 290 VVLGVKAVEKM 300 >ECs2696 [S] COG2354 Uncharacterized protein conserved in bacteria Ecs Escherichia coli O157:H7 Length = 305 Score = 322 bits (825), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 173/306 (56%), Positives = 222/306 (72%), Gaps = 19/306 (6%) Query: 1 MAGSAFFALIDDIATVLDDVSLMTKVAAKKTAGVLGDDLALNAQQVAGVRAERELPVVWA 60 +AGS+ L+DDIAT+LDD+S+M K+AAKKTAGVLGDDL+LNAQQV+GVRA RELPVVW Sbjct: 3 LAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWG 62 Query: 61 VAKGSLKNKAILVPAALAISAFIPWAVTPLLMLGGAFLCFEGFEKLAHKYLPHDDEHHEV 120 VAKGSL NK ILVP AL ISAFIPWA+TPLLM+GGAFLCFEG EK+ H + +H E Sbjct: 63 VAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLH--MLEARKHKED 120 Query: 121 AAKAAEDV------DPLVYEQEKIKDAVRTDFILSAEIIAITLGTVAGAPLQQQITVLVG 174 A++ + + DPL +E++KIK A+RTDFILSAEI+AITLG VA APL Q+ VL G Sbjct: 121 PAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSG 180 Query: 175 IALIMTAGVYGLVAGIVKLDDGGLYLVQHAGASAWGRFKAGIGRAVLAAAPKMMRSLSVI 234 IAL++T GVYGLV IVK+DD G +L + + A +G+ +L AP +M++LS++ Sbjct: 181 IALVVTVGVYGLVGVIVKIDDLGYWLAEKSSA-----LMQALGKGLLIIAPWLMKALSIV 235 Query: 235 GTIAMFMVGGGILTHGLPFAHHAIEAAAQAVEAIAVVGPILGAITPAVLNALFGVVAGAV 294 GT+AMF+VGGGI+ HG+ HHAIE A A+ + I P VLN + G + G + Sbjct: 236 GTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAM------ILPTVLNLILGFIIGGI 289 Query: 295 VLVVVK 300 V++ VK Sbjct: 290 VVLGVK 295 >ZyedI [S] COG2354 Uncharacterized protein conserved in bacteria EcZ Escherichia coli O157:H7 EDL933 Length = 305 Score = 319 bits (817), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 171/306 (55%), Positives = 220/306 (71%), Gaps = 19/306 (6%) Query: 1 MAGSAFFALIDDIATVLDDVSLMTKVAAKKTAGVLGDDLALNAQQVAGVRAERELPVVWA 60 +AGS+ L+DDIAT+LDD+S+M K+AAKKTAGVLGDDL+LNAQQV+GVRA RELPVVW Sbjct: 3 LAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWG 62 Query: 61 VAKGSLKNKAILVPAALAISAFIPWAVTPLLMLGGAFLCFEGFEKLAHKYLPHDDEHHEV 120 VAKGSL NK ILVP AL ISAFIPWA+TPLLM+GGAFLCFEG EK+ H + +H E Sbjct: 63 VAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLH--MLEXRKHKED 120 Query: 121 AAKAAEDV------DPLVYEQEKIKDAVRTDFILSAEIIAITLGTVAGAPLQQQITVLVG 174 A++ + + DPL +E++KIK A+RTDFILSAEI+AITLG VA APL Q+ L G Sbjct: 121 PAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLXLSG 180 Query: 175 IALIMTAGVYGLVAGIVKLDDGGLYLVQHAGASAWGRFKAGIGRAVLAAAPKMMRSLSVI 234 IAL++T GVYGL IVK+DD G +L + + A +G+ +L AP +M++LS++ Sbjct: 181 IALVVTVGVYGLXGVIVKIDDLGYWLAEKSSA-----LMQALGKGLLIIAPWLMKALSIV 235 Query: 235 GTIAMFMVGGGILTHGLPFAHHAIEAAAQAVEAIAVVGPILGAITPAVLNALFGVVAGAV 294 GT+AMF+VGGGI+ HG+ HHAIE A A+ + I P VLN + G + G + Sbjct: 236 GTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAM------ILPTVLNLILGFIIGGI 289 Query: 295 VLVVVK 300 V++ VK Sbjct: 290 VVLGVK 295