BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0022.p         (160 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0497 Non COG                                                       202   3e-52
HI0670 [J] COG1490 D-Tyr-tRNAtyr deacylase Hin Haemophilus influ...   166   2e-41
dtd [J] COG1490 D-Tyr-tRNAtyr deacylase Eco Escherichia coli K12      162   4e-40
ZyihZ [J] COG1490 D-Tyr-tRNAtyr deacylase EcZ Escherichia coli O...   162   4e-40
ECs4810 [J] COG1490 D-Tyr-tRNAtyr deacylase Ecs Escherichia coli...   162   4e-40

>RSc0497 Non COG
          Length = 166

 Score =  202 bits (513), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 104/156 (66%), Positives = 121/156 (77%), Gaps = 7/156 (4%)

Query: 1   MIALLQRASQASVVVDGQTLGSIGTGLMVLVCAERHDTPAEADALLKKLLAYRVFSDEAG 60
           MI L+QR SQA+V VDG+ +G IG GL+ LVCAER DT AEAD LL+KLL YRVFSD  G
Sbjct: 1   MIGLIQRVSQAAVRVDGRVVGEIGPGLLALVCAERGDTVAEADRLLEKLLNYRVFSDAQG 60

Query: 61  KMNRSVADVQ-----GGLLLIPQFTLAADTNSGTRPSFTPAAAPELGRQLFDHFVAQARV 115
           KMN  V ++      GGLL++ QFTLAADT SGTRPSFTPAAAPE GR+L++HFVA+AR 
Sbjct: 61  KMNLPVRNIDGNGLAGGLLVVSQFTLAADTKSGTRPSFTPAAAPEAGRRLYEHFVARARQ 120

Query: 116 RHGEERVGTGRFGADMKVSLTNDGPVTFWLQVKPKA 151
           +H    V TG FGA M+VSL NDGPVTFWLQV P+A
Sbjct: 121 QH--PIVATGEFGAMMQVSLVNDGPVTFWLQVAPQA 154


>HI0670 [J] COG1490 D-Tyr-tRNAtyr deacylase Hin Haemophilus influenzae
          Length = 144

 Score =  166 bits (420), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 80/147 (54%), Positives = 104/147 (70%), Gaps = 3/147 (2%)

Query: 1   MIALLQRASQASVVVDGQTLGSIGTGLMVLVCAERHDTPAEADALLKKLLAYRVFSDEAG 60
           MIAL+QR SQA V V G+T+G IG GL+VL+  E+ D   +AD L +K+L YR+FSDE  
Sbjct: 1   MIALIQRVSQAKVDVKGETIGKIGKGLLVLLGVEKEDNREKADKLAEKVLNYRIFSDEND 60

Query: 61  KMNRSVADVQGGLLLIPQFTLAADTNSGTRPSFTPAAAPELGRQLFDHFVAQARVRHGEE 120
           KMN +V   QG LL++ QFTLAADT  G RPSF+  A+P L  +L+++F+ +   +    
Sbjct: 61  KMNLNVQQAQGELLIVSQFTLAADTQKGLRPSFSKGASPALANELYEYFIQKCAEKLP-- 118

Query: 121 RVGTGRFGADMKVSLTNDGPVTFWLQV 147
            V TG+F ADM+VSLTNDGPVTFWL V
Sbjct: 119 -VSTGQFAADMQVSLTNDGPVTFWLNV 144


>dtd [J] COG1490 D-Tyr-tRNAtyr deacylase Eco Escherichia coli K12
          Length = 145

 Score =  162 bits (409), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 78/147 (53%), Positives = 102/147 (69%), Gaps = 2/147 (1%)

Query: 1   MIALLQRASQASVVVDGQTLGSIGTGLMVLVCAERHDTPAEADALLKKLLAYRVFSDEAG 60
           MIAL+QR ++ASV V+G+  G IG GL+VL+  E+ D   +A+ L +++L YR+FSD  G
Sbjct: 1   MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEG 60

Query: 61  KMNRSVADVQGGLLLIPQFTLAADTNSGTRPSFTPAAAPELGRQLFDHFVAQARVRHGEE 120
           KMN +V    G +L++ QFTLAADT  G RPSF+  A+P+    L+D+FV   R R  E 
Sbjct: 61  KMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFV--ERCRQQEM 118

Query: 121 RVGTGRFGADMKVSLTNDGPVTFWLQV 147
              TGRF ADM+VSL NDGPVTFWLQV
Sbjct: 119 NTQTGRFAADMQVSLVNDGPVTFWLQV 145


>ZyihZ [J] COG1490 D-Tyr-tRNAtyr deacylase EcZ Escherichia coli O157:H7
           EDL933
          Length = 145

 Score =  162 bits (409), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 78/147 (53%), Positives = 102/147 (69%), Gaps = 2/147 (1%)

Query: 1   MIALLQRASQASVVVDGQTLGSIGTGLMVLVCAERHDTPAEADALLKKLLAYRVFSDEAG 60
           MIAL+QR ++ASV V+G+  G IG GL+VL+  E+ D   +A+ L +++L YR+FSD  G
Sbjct: 1   MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEG 60

Query: 61  KMNRSVADVQGGLLLIPQFTLAADTNSGTRPSFTPAAAPELGRQLFDHFVAQARVRHGEE 120
           KMN +V    G +L++ QFTLAADT  G RPSF+  A+P+    L+D+FV   R R  E 
Sbjct: 61  KMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFV--ERCRQQEM 118

Query: 121 RVGTGRFGADMKVSLTNDGPVTFWLQV 147
              TGRF ADM+VSL NDGPVTFWLQV
Sbjct: 119 NTQTGRFAADMQVSLVNDGPVTFWLQV 145


>ECs4810 [J] COG1490 D-Tyr-tRNAtyr deacylase Ecs Escherichia coli O157:H7
          Length = 145

 Score =  162 bits (409), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 78/147 (53%), Positives = 102/147 (69%), Gaps = 2/147 (1%)

Query: 1   MIALLQRASQASVVVDGQTLGSIGTGLMVLVCAERHDTPAEADALLKKLLAYRVFSDEAG 60
           MIAL+QR ++ASV V+G+  G IG GL+VL+  E+ D   +A+ L +++L YR+FSD  G
Sbjct: 1   MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEG 60

Query: 61  KMNRSVADVQGGLLLIPQFTLAADTNSGTRPSFTPAAAPELGRQLFDHFVAQARVRHGEE 120
           KMN +V    G +L++ QFTLAADT  G RPSF+  A+P+    L+D+FV   R R  E 
Sbjct: 61  KMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFV--ERCRQQEM 118

Query: 121 RVGTGRFGADMKVSLTNDGPVTFWLQV 147
              TGRF ADM+VSL NDGPVTFWLQV
Sbjct: 119 NTQTGRFAADMQVSLVNDGPVTFWLQV 145