BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0021.p (373 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0496 [J] COG0162 Tyrosyl-tRNA synthetase Rso Ralstonia solana... 622 e-178 PM0755 [J] COG0162 Tyrosyl-tRNA synthetase Pmu Pasteurella multo... 489 e-138 HI1610 [J] COG0162 Tyrosyl-tRNA synthetase Hin Haemophilus influ... 478 e-134 VC0631 [J] COG0162 Tyrosyl-tRNA synthetase Vch Vibrio cholerae 475 e-134 PA0668 [J] COG0162 Tyrosyl-tRNA synthetase Pae Pseudomonas aerug... 466 e-131 >RSc0496 [J] COG0162 Tyrosyl-tRNA synthetase Rso Ralstonia solanacearum Length = 392 Score = 622 bits (1604), Expect = e-178, Method: Compositional matrix adjust. Identities = 295/369 (79%), Positives = 329/369 (89%) Query: 5 SRXSGQPLRIKLGLDPTAPDLHLGHTVVLNKMRQLQNLGHQVIFLIGDFTSMIGDPSGRN 64 S +G PLRIKLGLDPTAPD+H+GHTVVLNKMRQLQ+LGHQVIFLIGDFTS IGDPSGRN Sbjct: 24 SAATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHQVIFLIGDFTSTIGDPSGRN 83 Query: 65 ATRPPLSREQIEINAKTYFAQASLVLDPSKTEIRYNSEWCDALGSRGMIQLASRYTVARM 124 ATRPPL+REQIE NA+TY+ QAS+VLDPSKTEIRYNSEWCD LG+RG+IQLA++YTVARM Sbjct: 84 ATRPPLTREQIEANAQTYYRQASMVLDPSKTEIRYNSEWCDPLGARGIIQLAAKYTVARM 143 Query: 125 MERDDFTKRFKEGTPISVHEFLYPLMQGYDSVALKSDLELGGTDQKFNLLVGRELQKDFG 184 MERDDFTKR+K G PISVHEFLYPLMQGYDSVALKSDLELGGTDQKFNLLVGRELQK++G Sbjct: 144 MERDDFTKRYKAGVPISVHEFLYPLMQGYDSVALKSDLELGGTDQKFNLLVGRELQKEYG 203 Query: 185 QEPQCILTMPLLEGLDGVEKMSKSKGNYIGITEPANTMFAKVMSISDVMMWRYYELLSFR 244 QEPQCILTMPLL GLDGVEKMSKSKGNY+GI+E N MF K+MSISD +MW YY LLSFR Sbjct: 204 QEPQCILTMPLLVGLDGVEKMSKSKGNYVGISEAPNEMFGKLMSISDDLMWTYYTLLSFR 263 Query: 245 SMAEIAGYKAEVEAGKNPRDIKVALAQEIVARFHSQQAAEDALADFVNRSKGGIPDDIPE 304 +AEI K EV G+NPRD KV LAQEI+ARFHSQ AE AL DF +R++GG+PDDIP+ Sbjct: 264 PLAEIDLMKQEVTLGRNPRDCKVLLAQEIIARFHSQADAERALEDFNHRARGGVPDDIPQ 323 Query: 305 VSLSGAPLGIGQLLKQANLCASTSEALRMVEQGGVRIDGTVISDKGLKVEAGQCVVQVGK 364 + LSGAP+GI QLLKQA LC STSEA R +EQGGV+IDGTVISDKGLKVEAG V+QVGK Sbjct: 324 IELSGAPIGIAQLLKQAGLCPSTSEANRNIEQGGVKIDGTVISDKGLKVEAGTFVMQVGK 383 Query: 365 RKFARVTLA 373 R+FARV L+ Sbjct: 384 RRFARVVLS 392 >PM0755 [J] COG0162 Tyrosyl-tRNA synthetase Pmu Pasteurella multocida Length = 395 Score = 489 bits (1260), Expect = e-138, Method: Compositional matrix adjust. Identities = 234/364 (64%), Positives = 285/364 (78%), Gaps = 2/364 (0%) Query: 10 QPLRIKLGLDPTAPDLHLGHTVVLNKMRQLQNLGHQVIFLIGDFTSMIGDPSGRNATRPP 69 +PLR+KLG DPTAPD+HLGHTVVLNK+RQ Q GH+VIFLIGDFT M+GDPSG+N TRPP Sbjct: 32 RPLRVKLGADPTAPDIHLGHTVVLNKLRQFQQFGHEVIFLIGDFTGMVGDPSGKNTTRPP 91 Query: 70 LSREQIEINAKTYFAQASLVLDPSKTEIRYNSEWCDALGSRGMIQLASRYTVARMMERDD 129 LSR+ + NA+TY Q +LDP KT I +NS W LG+ GMI+L S YTVARM+ERDD Sbjct: 92 LSRDDVLRNAETYKQQIYKILDPQKTRIVFNSSWLGELGTEGMIRLTSNYTVARMLERDD 151 Query: 130 FTKRFKEGTPISVHEFLYPLMQGYDSVALKSDLELGGTDQKFNLLVGRELQKDFGQEPQC 189 F KRF PI++HEF+YPL+QGYDSVAL +D+ELGGTDQKFNLLVGRELQK GQ+PQ Sbjct: 152 FKKRFSNNQPIAIHEFIYPLLQGYDSVALDADIELGGTDQKFNLLVGRELQKSAGQKPQV 211 Query: 190 ILTMPLLEGLDGVEKMSKSKGNYIGITEPANTMFAKVMSISDVMMWRYYELLSFRSMAEI 249 +T+PLL GLDG +KMSKS GNYIG+ E MF KVMSISD +MW +Y+LLSFR + EI Sbjct: 212 AITLPLLVGLDGEKKMSKSLGNYIGVAESPTEMFGKVMSISDELMWDWYDLLSFRPLTEI 271 Query: 250 AGYKAEVEAGKNPRDIKVALAQEIVARFHSQQAAEDALADFVNR-SKGGIPDDIPEVSLS 308 A K EVE G+NPRDIKV LA+E++ARFHS+ AE A +F+NR KG +P+D+PE++ Sbjct: 272 AQLKQEVENGRNPRDIKVLLAKELIARFHSEADAEAAEQEFINRFQKGAMPEDMPELTFE 331 Query: 309 GAPLGIGQLLKQANLCASTSEALRMVEQGGVRIDGTVISDKGLKVEAGQCVVQVGKRKFA 368 G +G+ LLK+A L ASTSEA RMV+QGGV+IDG + D L ++A V QVGKRKFA Sbjct: 332 GE-MGLANLLKEAGLVASTSEANRMVQQGGVKIDGEKVEDAKLVIKASTAVYQVGKRKFA 390 Query: 369 RVTL 372 RVT+ Sbjct: 391 RVTV 394 >HI1610 [J] COG0162 Tyrosyl-tRNA synthetase Hin Haemophilus influenzae Length = 401 Score = 478 bits (1230), Expect = e-134, Method: Compositional matrix adjust. Identities = 230/364 (63%), Positives = 286/364 (78%), Gaps = 2/364 (0%) Query: 10 QPLRIKLGLDPTAPDLHLGHTVVLNKMRQLQNLGHQVIFLIGDFTSMIGDPSGRNATRPP 69 +PL++KLG DPTAPD+HLGHTVVLNK+RQ Q LGH+V FLIGDFT M+GDPSG+NATRPP Sbjct: 32 RPLKVKLGADPTAPDIHLGHTVVLNKLRQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPP 91 Query: 70 LSREQIEINAKTYFAQASLVLDPSKTEIRYNSEWCDALGSRGMIQLASRYTVARMMERDD 129 LSRE + NA+TY Q +LDP KT+I +NSEW LG+ GMI+LAS YTVARM+ERDD Sbjct: 92 LSREDVLRNAETYKEQIYKILDPQKTKIVFNSEWLSKLGTXGMIRLASNYTVARMLERDD 151 Query: 130 FTKRFKEGTPISVHEFLYPLMQGYDSVALKSDLELGGTDQKFNLLVGRELQKDFGQEPQC 189 F KRF PI++HEF+YPL+QGYDSVAL +D+ELGGTDQKFNLLVGRELQK G++PQ Sbjct: 152 FKKRFGNNQPIAIHEFIYPLLQGYDSVALDADVELGGTDQKFNLLVGRELQKSAGKKPQV 211 Query: 190 ILTMPLLEGLDGVEKMSKSKGNYIGITEPANTMFAKVMSISDVMMWRYYELLSFRSMAEI 249 +T+PLL GLDG +KMSKS GNYIG+TE + MF KVMSISD +MW +Y LLSFR + EI Sbjct: 212 AITLPLLVGLDGEKKMSKSLGNYIGVTEAPSDMFGKVMSISDELMWDWYNLLSFRPLNEI 271 Query: 250 AGYKAEVEAGKNPRDIKVALAQEIVARFHSQQAAEDALADFVNR-SKGGIPDDIPEVSLS 308 A K+EVE GKNPRD+K+ LA+E++ARFH+++AA A +F+NR KG +PD++PE + S Sbjct: 272 AQLKSEVENGKNPRDVKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFS 331 Query: 309 GAPLGIGQLLKQANLCASTSEALRMVEQGGVRIDGTVISDKGLKVEAGQCVVQVGKRKFA 368 G +G+ LLK+A L STSEA+R +QGGV+I+G + + G V QVGKRKFA Sbjct: 332 GE-MGLATLLKEAGLVPSTSEAIRSAQQGGVKINGEKVDNVKDNAPKGTNVYQVGKRKFA 390 Query: 369 RVTL 372 RV L Sbjct: 391 RVRL 394 >VC0631 [J] COG0162 Tyrosyl-tRNA synthetase Vch Vibrio cholerae Length = 395 Score = 475 bits (1223), Expect = e-134, Method: Compositional matrix adjust. Identities = 222/363 (61%), Positives = 280/363 (77%) Query: 10 QPLRIKLGLDPTAPDLHLGHTVVLNKMRQLQNLGHQVIFLIGDFTSMIGDPSGRNATRPP 69 +PLRIKLG DPTAPD+HLGHTV+LNK+R Q+LGH V FLIGDFT M+GDP+G+N TRPP Sbjct: 32 RPLRIKLGADPTAPDIHLGHTVILNKLRTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPP 91 Query: 70 LSREQIEINAKTYFAQASLVLDPSKTEIRYNSEWCDALGSRGMIQLASRYTVARMMERDD 129 L+RE + NA+TY Q +LDP+KT+I++NSEW LG+ GMI+LAS TVARM+ERDD Sbjct: 92 LTREDVLRNAETYKQQVFKILDPAKTKIQFNSEWLSKLGAEGMIRLASNQTVARMLERDD 151 Query: 130 FTKRFKEGTPISVHEFLYPLMQGYDSVALKSDLELGGTDQKFNLLVGRELQKDFGQEPQC 189 F KR+ G PI++HEF+YPL+QGYDSVA+++D+ELGGTDQKFNLL+GRELQK GQ+PQ Sbjct: 152 FKKRYNNGQPIAIHEFMYPLLQGYDSVAMETDVELGGTDQKFNLLMGRELQKANGQKPQV 211 Query: 190 ILTMPLLEGLDGVEKMSKSKGNYIGITEPANTMFAKVMSISDVMMWRYYELLSFRSMAEI 249 +L MPLL GLDG +KMSKS NYIG++E + MF K+MSISD +MW YYELLSFR + E+ Sbjct: 212 VLMMPLLVGLDGEKKMSKSAHNYIGVSEAPSEMFGKIMSISDDLMWSYYELLSFRPLEEV 271 Query: 250 AGYKAEVEAGKNPRDIKVALAQEIVARFHSQQAAEDALADFVNRSKGGIPDDIPEVSLSG 309 A +KAEV G NPRDIK+ LA+EI+ARFHSQ A+ A +F+NR + G + Sbjct: 272 AQFKAEVANGANPRDIKILLAKEIIARFHSQADADAAEQEFINRFQKGAMPEEMPEFEFE 331 Query: 310 APLGIGQLLKQANLCASTSEALRMVEQGGVRIDGTVISDKGLKVEAGQCVVQVGKRKFAR 369 + + I LLK+A L ASTS+ALRM++QG V++DG + D L G V QVGKRKFAR Sbjct: 332 SGIAISNLLKEAGLVASTSDALRMIKQGAVKLDGEKLEDAKLIPACGTSVYQVGKRKFAR 391 Query: 370 VTL 372 VT+ Sbjct: 392 VTI 394 >PA0668 [J] COG0162 Tyrosyl-tRNA synthetase Pae Pseudomonas aeruginosa Length = 399 Score = 466 bits (1198), Expect = e-131, Method: Compositional matrix adjust. Identities = 222/367 (60%), Positives = 284/367 (77%), Gaps = 4/367 (1%) Query: 9 GQPLRIKLGLDPTAPDLHLGHTVVLNKMRQLQNLGHQVIFLIGDFTSMIGDPSGRNATRP 68 GQPLRIK G DPTAPDLHLGHTV++NK+RQ Q+LGHQVIFLIGDFT MIGDPSG++ TRP Sbjct: 31 GQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVIFLIGDFTGMIGDPSGKSVTRP 90 Query: 69 PLSREQIEINAKTYFAQASLVLDPSKTEIRYNSEWCDALGSRGMIQLASRYTVARMMERD 128 PL+REQ+ NA+TY +Q +LDP+KTE+ +NS W D L I+LAS+YTVARM+ERD Sbjct: 91 PLTREQVLENAETYKSQVFKILDPAKTEVAFNSTWMDQLTPADFIRLASQYTVARMLERD 150 Query: 129 DFTKRFKEGTPISVHEFLYPLMQGYDSVALKSDLELGGTDQKFNLLVGRELQKDFGQEPQ 188 DF+KR+ PI++HEFLYPL+QGYDSVALK+D+ELGGTDQKFNLL+GRELQ+ +GQE Q Sbjct: 151 DFSKRYASNQPIAIHEFLYPLVQGYDSVALKADVELGGTDQKFNLLMGRELQRAYGQEAQ 210 Query: 189 CILTMPLLEGLDGVEKMSKSKGNYIGITEPANTMFAKVMSISDVMMWRYYELLSFRSMAE 248 ILTMPLLEGLDGV+KMSKS GNYIGI E M++K++SI D +MWRY+ELLSFRS+ E Sbjct: 211 VILTMPLLEGLDGVKKMSKSLGNYIGIQEAPGVMYSKLVSIPDTLMWRYFELLSFRSLDE 270 Query: 249 IAGYKAEVEAGKNPRDIKVALAQEIVARFHSQQAAEDALADFVNRSK-GGIPDDIPEVSL 307 I ++ +VEAG NPRDIK+ LA+EIVARFH ++AA A NR K G +P+D+PE+ L Sbjct: 271 IDSFRKDVEAGANPRDIKIKLAEEIVARFHGEEAAASAHKSAGNRLKEGELPEDLPEIEL 330 Query: 308 SGAP-LGIGQLLKQANLCASTSEALRMVEQGGVRIDGTVISDKGLKVEAGQC-VVQVGKR 365 S + + +L +A L + + A ++ G V++DG V+ D+ + G+ V Q GK+ Sbjct: 331 SSPEDMPVASVLNKAGLVKNAAAARDLLGAGSVKVDGQVV-DRTFMLALGETRVFQAGKK 389 Query: 366 KFARVTL 372 FAR+TL Sbjct: 390 AFARITL 396