BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0017.p         (156 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0899 Non COG                                                        77   2e-14

>RSc0899 Non COG
          Length = 167

 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/103 (50%), Positives = 67/103 (65%), Gaps = 3/103 (2%)

Query: 51  GVVEAIEVTHKE--SSGVAGAVVGGVAGGLLGNAVGGGTGRVLATVAGAAGGAYAGNQVE 108
           G VE+IE       S G+ G ++GGVAGG+LG+ +GGGTG  +AT+ GAA GA AGNQVE
Sbjct: 58  GRVESIEPMQAPANSPGILGTIIGGVAGGVLGHQIGGGTGNTVATIGGAALGALAGNQVE 117

Query: 109 RNNSAGRQ-VYNIRVRMSDGSLQTFAQEDNTDFRVGDRVRLDN 150
           R   AG Q VY + VR+ DG + T  Q +  + RVGDR  + N
Sbjct: 118 RAAGAGGQTVYRVTVRLDDGRVATVTQRNPNNLRVGDRAMVAN 160