BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0006.p         (150 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2786 [I] COG0511 Biotin carboxyl carrier protein Rso Ralstoni...   129   2e-30
accB [I] COG0511 Biotin carboxyl carrier protein Eco Escherichia...   117   9e-27
ZaccB [I] COG0511 Biotin carboxyl carrier protein EcZ Escherichi...   117   9e-27
ECs4127 [I] COG0511 Biotin carboxyl carrier protein Ecs Escheric...   117   9e-27
NMB1860 [I] COG0511 Biotin carboxyl carrier protein Nme Neisseri...   115   3e-26

>RSc2786 [I] COG0511 Biotin carboxyl carrier protein Rso Ralstonia
           solanacearum
          Length = 155

 Score =  129 bits (325), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 61/77 (79%), Positives = 68/77 (88%)

Query: 74  GYIVKSPMVGTFYRSSAPGAPAFVEVGKEVKEGDTLCIIEAMKLLNEIDADKGGVVKQIL 133
           G+IV SPMVGTFYRS +PGA AFV VG  VKEG TLCIIEAMKLLNEI+ADK GV+K +L
Sbjct: 79  GHIVTSPMVGTFYRSPSPGAAAFVNVGDTVKEGQTLCIIEAMKLLNEIEADKAGVIKDVL 138

Query: 134 VENGQAVEFGQPLFVLG 150
           VENGQAVE+GQPLFV+G
Sbjct: 139 VENGQAVEYGQPLFVIG 155


>accB [I] COG0511 Biotin carboxyl carrier protein Eco Escherichia coli
           K12
          Length = 156

 Score =  117 bits (293), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 61/112 (54%), Positives = 78/112 (69%), Gaps = 1/112 (0%)

Query: 38  EQARAAGATLATFQSNHEGALIDRIHXAPAAPAVPEGYIVKSPMVGTFYRSSAPGAPAFV 97
           +QA AA       QSN           APAA  +  G+IV+SPMVGTFYR+ +P A AF+
Sbjct: 45  QQAYAAPMMQQPAQSNAAAPATVPSMEAPAAAEI-SGHIVRSPMVGTFYRTPSPDAKAFI 103

Query: 98  EVGKEVKEGDTLCIIEAMKLLNEIDADKGGVVKQILVENGQAVEFGQPLFVL 149
           EVG++V  GDTLCI+EAMK++N+I+ADK G VK ILVE+GQ VEF +PL V+
Sbjct: 104 EVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVI 155


>ZaccB [I] COG0511 Biotin carboxyl carrier protein EcZ Escherichia coli
           O157:H7 EDL933
          Length = 156

 Score =  117 bits (293), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 61/112 (54%), Positives = 78/112 (69%), Gaps = 1/112 (0%)

Query: 38  EQARAAGATLATFQSNHEGALIDRIHXAPAAPAVPEGYIVKSPMVGTFYRSSAPGAPAFV 97
           +QA AA       QSN           APAA  +  G+IV+SPMVGTFYR+ +P A AF+
Sbjct: 45  QQAYAAPMMQQPAQSNAAAPATVPSMEAPAAAEI-SGHIVRSPMVGTFYRTPSPDAKAFI 103

Query: 98  EVGKEVKEGDTLCIIEAMKLLNEIDADKGGVVKQILVENGQAVEFGQPLFVL 149
           EVG++V  GDTLCI+EAMK++N+I+ADK G VK ILVE+GQ VEF +PL V+
Sbjct: 104 EVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVI 155


>ECs4127 [I] COG0511 Biotin carboxyl carrier protein Ecs Escherichia coli
           O157:H7
          Length = 156

 Score =  117 bits (293), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 61/112 (54%), Positives = 78/112 (69%), Gaps = 1/112 (0%)

Query: 38  EQARAAGATLATFQSNHEGALIDRIHXAPAAPAVPEGYIVKSPMVGTFYRSSAPGAPAFV 97
           +QA AA       QSN           APAA  +  G+IV+SPMVGTFYR+ +P A AF+
Sbjct: 45  QQAYAAPMMQQPAQSNAAAPATVPSMEAPAAAEI-SGHIVRSPMVGTFYRTPSPDAKAFI 103

Query: 98  EVGKEVKEGDTLCIIEAMKLLNEIDADKGGVVKQILVENGQAVEFGQPLFVL 149
           EVG++V  GDTLCI+EAMK++N+I+ADK G VK ILVE+GQ VEF +PL V+
Sbjct: 104 EVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVI 155


>NMB1860 [I] COG0511 Biotin carboxyl carrier protein Nme Neisseria
           meningitidis MC58
          Length = 151

 Score =  115 bits (288), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 53/73 (72%), Positives = 63/73 (86%)

Query: 78  KSPMVGTFYRSSAPGAPAFVEVGKEVKEGDTLCIIEAMKLLNEIDADKGGVVKQILVENG 137
           KSPMVGTFYR+  P A  FVEVG++VK GDTLCIIEAMKL+NEI+A+K G VK+ILVENG
Sbjct: 79  KSPMVGTFYRAPGPNAAPFVEVGQQVKAGDTLCIIEAMKLMNEIEAEKSGTVKEILVENG 138

Query: 138 QAVEFGQPLFVLG 150
             VEFG+PLF++G
Sbjct: 139 TPVEFGEPLFIIG 151