BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0069.p         (87 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGl1081 [G] COG1129 ABC-type sugar transport system, ATPase comp...   147   7e-36
YPO2500 [G] COG1129 ABC-type sugar transport system, ATPase comp...   113   1e-25
SMb21376 [G] COG1129 ABC-type sugar transport system, ATPase com...   102   1e-22
Z5691 [G] COG1129 ABC-type sugar transport system, ATPase compon...    98   6e-21
ECs5073 [G] COG1129 ABC-type sugar transport system, ATPase comp...    98   6e-21

>AGl1081 [G] COG1129 ABC-type sugar transport system, ATPase component Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 472

 Score =  147 bits (370), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 69/87 (79%), Positives = 79/87 (90%)

Query: 1   MQVLIFDEPTRGIDVGAKAEIYQLMREFTAQGYSIIMISSELPEVVGMSDRVCVFKGGGI 60
           M+VLIFDEPTRGIDVGAKAEIY LMREF A+G+SIIMISSELPEV+GMSDRVCVF+ GGI
Sbjct: 386 MRVLIFDEPTRGIDVGAKAEIYSLMREFAARGHSIIMISSELPEVIGMSDRVCVFRSGGI 445

Query: 61  VATVEGDAVTAEEIMTHATTGRLHHAA 87
           VATVEG+ + +E IMT+ATTGR+ H A
Sbjct: 446 VATVEGEDINSETIMTNATTGRVEHVA 472


>YPO2500 [G] COG1129 ABC-type sugar transport system, ATPase component Ype
           Yersinia pestis
          Length = 496

 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 52/77 (67%), Positives = 64/77 (83%)

Query: 3   VLIFDEPTRGIDVGAKAEIYQLMREFTAQGYSIIMISSELPEVVGMSDRVCVFKGGGIVA 62
           +LIFDEPTRGIDVGAK+EIYQLM++ T +G SIIMISSELPE++G+ DRV VF+GG IVA
Sbjct: 416 ILIFDEPTRGIDVGAKSEIYQLMQQLTQKGISIIMISSELPEIIGVCDRVLVFRGGHIVA 475

Query: 63  TVEGDAVTAEEIMTHAT 79
            + GD + +  IM HAT
Sbjct: 476 ELAGDEIESNNIMLHAT 492


>SMb21376 [G] COG1129 ABC-type sugar transport system, ATPase component Sme
           Sinorhizobium meliloti
          Length = 503

 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/78 (62%), Positives = 62/78 (79%)

Query: 2   QVLIFDEPTRGIDVGAKAEIYQLMREFTAQGYSIIMISSELPEVVGMSDRVCVFKGGGIV 61
           +VLI DEPTRG+DVGAK EIY+++RE  A+G +I++ISS+LPEV+GMSDRV V   G   
Sbjct: 422 KVLILDEPTRGVDVGAKFEIYKIIRELAAEGTAILLISSDLPEVLGMSDRVVVMHEGAPG 481

Query: 62  ATVEGDAVTAEEIMTHAT 79
           AT+EG A+T E IM HAT
Sbjct: 482 ATLEGSALTPETIMAHAT 499


>Z5691 [G] COG1129 ABC-type sugar transport system, ATPase component EcZ
           Escherichia coli O157:H7 EDL933
          Length = 517

 Score = 97.8 bits (242), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 44/78 (56%), Positives = 58/78 (74%)

Query: 2   QVLIFDEPTRGIDVGAKAEIYQLMREFTAQGYSIIMISSELPEVVGMSDRVCVFKGGGIV 61
           ++L+ DEP RG+DVGAK+EIY++M E   +G +I+MISSELPE+VGMSDRV V + G I 
Sbjct: 428 RILLLDEPARGVDVGAKSEIYRIMNEMARKGVAILMISSELPEIVGMSDRVYVMREGSIA 487

Query: 62  ATVEGDAVTAEEIMTHAT 79
             + G  +T E IMT AT
Sbjct: 488 GELNGKNITQENIMTLAT 505


>ECs5073 [G] COG1129 ABC-type sugar transport system, ATPase component Ecs
           Escherichia coli O157:H7
          Length = 506

 Score = 97.8 bits (242), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 44/78 (56%), Positives = 58/78 (74%)

Query: 2   QVLIFDEPTRGIDVGAKAEIYQLMREFTAQGYSIIMISSELPEVVGMSDRVCVFKGGGIV 61
           ++L+ DEP RG+DVGAK+EIY++M E   +G +I+MISSELPE+VGMSDRV V + G I 
Sbjct: 417 RILLLDEPARGVDVGAKSEIYRIMNEMARKGVAILMISSELPEIVGMSDRVYVMREGSIA 476

Query: 62  ATVEGDAVTAEEIMTHAT 79
             + G  +T E IMT AT
Sbjct: 477 GELNGKNITQENIMTLAT 494