BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0060.p         (189 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VC1125 Non COG                                                        152   5e-37

>VC1125 Non COG
          Length = 175

 Score =  152 bits (383), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 71/160 (44%), Positives = 99/160 (61%), Gaps = 1/160 (0%)

Query: 28  GGCASQQISDYAGKTPVFDPAVFFKGRTEAWGMFQKRGGEVARRFHVVVTGTVDGNTLTL 87
            GC S +I DY   TP FD   +F G T AWGM Q    +  RRF VV+ G ++ N L L
Sbjct: 16  SGC-SAEIDDYRATTPKFDLFNYFVGTTHAWGMVQDYTEKQTRRFEVVIEGRIENNQLIL 74

Query: 88  DERFRYDDGETQTRVWTLVRQPDNSWRGRAGDVIGEAIGHTAGNALHWNYTLLLPVNDKQ 147
            E F +DDGE   R+WT+ R  D+++ GRA D++G A G   GNAL W Y  +L ++   
Sbjct: 75  VEDFVFDDGEKDQRIWTINRTADDAYEGRADDIVGTARGKEVGNALQWQYDFVLKLDSGD 134

Query: 148 YEVQMDDWMYQMDERTLINRTSMSKFGVEVGQVTLFFRKE 187
            +V  DDW+Y+ D++ + N T + KFG+EVG++TLFF K+
Sbjct: 135 VQVHFDDWLYRQDDKRVFNLTKIRKFGLEVGRITLFFEKQ 174