BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0023.p (273 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0585 [GEPR] COG0477 Permeases of the major facilitator superf... 212 9e-55 SMc03889 [GEPR] COG0477 Permeases of the major facilitator super... 125 7e-29 mlr3825 [GEPR] COG0477 Permeases of the major facilitator superf... 122 1e-27 DR2502 [GEPR] COG0477 Permeases of the major facilitator superfa... 121 2e-27 BMEI0267 [GEPR] COG0477 Permeases of the major facilitator super... 111 2e-24 >RSc0585 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 408 Score = 212 bits (539), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 141/272 (51%), Positives = 178/272 (65%), Gaps = 10/272 (3%) Query: 4 AAFDVAMSVQAALVEGGRSRPIMSTLHAMFSIGGIAGSALGALP---GLSPLAHAALVAV 60 A FDVA++ QA VE +PI+S+LH MFS+GG+ G+A G + G+ H A + + Sbjct: 139 AGFDVAINAQATTVEAHSHKPIISSLHGMFSLGGMVGAAAGGVLLDLGVPAAVHCAGMGL 198 Query: 61 VTLSVALSIGPFALPDDVHDETASTPG--ADKSARRMVLVLGVISFLALMCEGGMYDWAA 118 +T +AL GPF LPD VH PG A + R +LVLG+++FL L+ EG MYDW Sbjct: 199 ITAGMALCAGPFMLPDHVH-----APGEPAHPTTGRTLLVLGLLAFLGLVGEGAMYDWTT 253 Query: 119 VYMRDIAQSPAAWVSYSYAAFSTGMAAGRLTGDRIRARIGGLRTLLWSGVAGAAGIALAA 178 VYMR++AQSP A S YAAFS GMA R GD RAR G R L SGV GI LA Sbjct: 254 VYMREVAQSPEAQASAGYAAFSGGMALARFGGDAARARWGNTRVLGVSGVLATGGILLAL 313 Query: 179 ALPTPLATMAGLLLAGLGIANLMPIFFLAAARVPGMPAAESIAAVARFAYVGMLLGPVCI 238 P P A +AG L G+G AN++PIFF+ A+R+PG+PAAE IAAVARFAYVGML+GPV I Sbjct: 314 LWPDPAAVLAGFALMGVGAANMVPIFFVTASRMPGVPAAEGIAAVARFAYVGMLIGPVFI 373 Query: 239 GGVAEHLGLRVSFVGVALVMMVVALFGPRAVK 270 G +A H LR VAL MM++A+ GPRA++ Sbjct: 374 GMIAHHSNLRWGLSLVALTMMLIAVAGPRAIR 405 >SMc03889 [GEPR] COG0477 Permeases of the major facilitator superfamily Sme Sinorhizobium meliloti Length = 379 Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 93/279 (33%), Positives = 139/279 (49%), Gaps = 25/279 (8%) Query: 5 AFDVAMSVQAALVEGGRSRPIMSTLHAMFSIGGIAGSA--------LGALPGLSPLAHAA 56 A DVAM+ A VE R IMS+ HA +S+GG+ G+ G LP HA Sbjct: 107 AMDVAMNANAVEVEKSMRRAIMSSCHAYWSLGGLIGAGIGGFLMARFGVLP------HAI 160 Query: 57 LVAVVTLSVALSIGPFALPDDVHDETASTPGADKSARRMVL-----VLGVISFLALMCEG 111 +V + L++ P L D H P A + R+ + ++G+++ +++ EG Sbjct: 161 VVTCLCLAILAVAWPMILADRPH------PAATREKLRLPMTPLPWLIGIMALFSMVPEG 214 Query: 112 GMYDWAAVYMRDIAQSPAAWVSYSYAAFSTGMAAGRLTGDRIRARIGGLRTLLWSGVAGA 171 + DW A+Y++D + + +AAFS MAA R GD +R R+G TL V Sbjct: 215 AVLDWGALYLKDELGASVELSGFGFAAFSATMAAMRFAGDHVRDRLGATLTLRICTVTAL 274 Query: 172 AGIALAAALPTPLATMAGLLLAGLGIANLMPIFFLAAARVPGMPAAESIAAVARFAYVGM 231 AG+ LA P + + G LAG+GI+N++PI F AA +PG+ ++ Y GM Sbjct: 275 AGMVLAGLAPNAVLAILGFALAGIGISNMVPIAFSAAGNMPGLQPGIGLSVATTMGYSGM 334 Query: 232 LLGPVCIGGVAEHLGLRVSFVGVALVMMVVALFGPRAVK 270 L P IG +AEH G + F V ++ +VV L AV Sbjct: 335 LFAPSLIGFIAEHSGFAIIFACVPVLFIVVLLLSHHAVH 373 >mlr3825 [GEPR] COG0477 Permeases of the major facilitator superfamily Mlo Mesorhizobium loti Length = 391 Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 93/260 (35%), Positives = 140/260 (53%), Gaps = 5/260 (1%) Query: 7 DVAMSVQAALVEGGRSRPIMSTLHAMFSIGGIAGSALGA--LPGLSPLAHAALVAVVTLS 64 DVAM+ A +VE SR IMS+ H +S+GG AG LG + LAHAA+V V+ + Sbjct: 118 DVAMNANAVVVERKMSRAIMSSSHGFWSLGGFAGGGLGGFAIQHYGHLAHAAVVTVLAFA 177 Query: 65 -VALSIGPFALPDDVHDETASTPGADKSARRMVLVLGVISFLALMCEGGMYDWAAVYMRD 123 +A+++G D + A A +V ++G+++ L ++ EG + DWAA+Y+R Sbjct: 178 AIAMAVGYLVAEDK--PQAAEHHKFALPANPLVYLIGLMALLTMVSEGAVLDWAALYLRQ 235 Query: 124 IAQSPAAWVSYSYAAFSTGMAAGRLTGDRIRARIGGLRTLLWSGVAGAAGIALAAALPTP 183 + A +YAAFS MA R GD +R R G + TL S V A G+ +A P+P Sbjct: 236 ELGADLAIAGLAYAAFSGVMAIMRFFGDGVRNRFGAVTTLRGSAVVAATGMLVAGLSPSP 295 Query: 184 LATMAGLLLAGLGIANLMPIFFLAAARVPGMPAAESIAAVARFAYVGMLLGPVCIGGVAE 243 +A G GIAN++PI F A GM + ++ V Y G+L+ P IG VAE Sbjct: 296 WFAIAAFATCGFGIANMVPIIFSAGGNQEGMSSGTGMSVVTTMGYSGILVAPSAIGFVAE 355 Query: 244 HLGLRVSFVGVALVMMVVAL 263 H F+ ++++++VV L Sbjct: 356 HSSFGPIFIAMSVLLIVVLL 375 >DR2502 [GEPR] COG0477 Permeases of the major facilitator superfamily Dra Deinococcus radiodurans Length = 471 Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 100/248 (40%), Positives = 129/248 (52%), Gaps = 8/248 (3%) Query: 5 AFDVAMSVQAALVEGGRSRPIMSTLHAMFSIGGIAGSALG-ALPGLSP-LAHAALVAVVT 62 A DVAM+ Q VE RP+MS LHA FS+GG+ G+ LG AL G P LAH VA+++ Sbjct: 195 ALDVAMNAQGVTVEKALGRPVMSRLHAYFSLGGVVGALLGTALVGRVPMLAHVGGVALLS 254 Query: 63 LSVALSIGPFAL---PDDVHDETASTPGADKSARRMVLVLGVISFLALMCEGGMYDWAAV 119 AL G F L P + A P L+LG + FL ++ EG YDWAA+ Sbjct: 255 TLTALVAGRFLLADAPTEPETAQADAPTPRSGLSPAALLLGGLCFLGMLSEGAHYDWAAL 314 Query: 120 YMRDIAQSPAAWVSYSYAAFSTGMAAGRLTGDRIRARIGGLRTLLWSGVAGAAGIALAAA 179 Y RD+ P YAAF T M GR GDR RAR G + + + A G+ LA Sbjct: 315 YCRDVLGLPGGQAGVGYAAFVTTMTLGRWFGDRARARFGDVAMVRAGALLSALGLGLALL 374 Query: 180 LPTPLATMAGLLLAGLGIANLMPIFFLAAARVPGMPAAESIAAVARFAYVGMLLGPVCIG 239 + P G L+GLG++N++P+ + AA IA VA Y G LLGP IG Sbjct: 375 VREPWPATLGFALSGLGLSNVVPVMYGAAGHA---LHGRGIAQVATIGYGGFLLGPPLIG 431 Query: 240 GVAEHLGL 247 +A+H GL Sbjct: 432 FLAQHSGL 439 >BMEI0267 [GEPR] COG0477 Permeases of the major facilitator superfamily Bme Brucella melitensis Length = 397 Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 75/254 (29%), Positives = 122/254 (48%), Gaps = 11/254 (4%) Query: 3 LAAFDVAMSVQAALVEGGRSRPIMSTLHAMFSIGGIAGSALGA--LPGLSPLAHAALVAV 60 +AA DV+M+ A VE R IMS+ HA +S+GG+ G+A G + + HA + + Sbjct: 122 MAAMDVSMNANAVAVEKKMRRAIMSSCHAFWSLGGLIGAATGGFLIAQFGSIVHALVTMI 181 Query: 61 VTLSVALSIGPFALPDDVHDETASTPGADKSA-----RRMVLVLGVISFLALMCEGGMYD 115 + + P +PD H P +K + ++GV++ +++ EG + D Sbjct: 182 AATILIIVAWPSIIPDTEHHH----PDGEKQKLALPRNPLPWLVGVMALFSMVPEGAILD 237 Query: 116 WAAVYMRDIAQSPAAWVSYSYAAFSTGMAAGRLTGDRIRARIGGLRTLLWSGVAGAAGIA 175 W A +MR + + +AAFS MA R GD +R R G ++TL G+ Sbjct: 238 WGAYHMRQDLGASVTVAGFGFAAFSGSMAVMRFAGDLVRDRFGAVKTLRACTAIAIIGML 297 Query: 176 LAAALPTPLATMAGLLLAGLGIANLMPIFFLAAARVPGMPAAESIAAVARFAYVGMLLGP 235 + + + G + G+GI+N++PI F A +PG+ + ++ Y GML+ P Sbjct: 298 IVGFGNSSATAIIGFAICGIGISNMVPIAFSMAGNMPGVNPSVGLSIATTLGYSGMLVAP 357 Query: 236 VCIGGVAEHLGLRV 249 IG VA H G V Sbjct: 358 SLIGFVARHSGFGV 371