BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0002.p         (148 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp1518 Non COG                                                        69   4e-12

>RSp1518 Non COG
          Length = 178

 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 29/46 (63%), Positives = 36/46 (78%)

Query: 103 VWVNASGKIYHCPGSKWYGKTRHGSYMSEAVARAAGKRADHGKVCS 148
           VW NAS K+YHCPG ++YGKT+ G+YMSEA A+A G R  HGK C+
Sbjct: 132 VWANASTKVYHCPGDRYYGKTKQGAYMSEADAKAQGMRPSHGKACA 177