BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0131.p
         (242 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310331|ref|YP_003774423.1| microcystin-dependent protein [...   245   2e-66

>gi|300310331|ref|YP_003774423.1| microcystin-dependent protein
           [Herbaspirillum seropedicae SmR1]
          Length = 281

 Score =  245 bits (626), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 134/241 (55%), Positives = 168/241 (69%), Gaps = 1/241 (0%)

Query: 1   MATPATYGSFNNAYVPATGQLLSVNQYAALYSLIGATYGSESNSNFKLPDLRGRVIIGAN 60
           MA P ++GSFN  YV A GQ LS+NQY ALYSLIG TYG  + + F LPDLRGRV++GAN
Sbjct: 42  MAVPPSFGSFNRQYVLAAGQQLSINQYTALYSLIGITYGGNAQTTFNLPDLRGRVLVGAN 101

Query: 61  TDGTFPAGKKGGQASVTLTMDQLPQHQFFIPSAAVNLSGIKATTTLSSLSGTADLAGVTV 120
              TFPAG  GG  S+ L++ QLP H F + +  V+LS + ATT LS LS T +L+GVT+
Sbjct: 102 -GTTFPAGATGGNTSINLSIAQLPPHNFVVAAIPVDLSRVTATTMLSGLSATTNLSGVTI 160

Query: 121 SGPPTGLVIKTVSGSGGQGTPSGNYLGKPPAATANLYANGTPDSNLNNNALGGTMTLTVA 180
           +G P+GL I   S +GG  +P GNYLGKP AA A  Y +  P+  LN+ ++GG M++T++
Sbjct: 161 AGTPSGLTIAASSTNGGVASPDGNYLGKPAAAAAAAYTSVAPNVTLNSASIGGQMSMTIS 220

Query: 181 AGSTAPVAVTGNANTTISGSGATTPGVTNTLGGGVPINLLPPYLAMTYYIAAKNGIYPSR 240
             +TAPV++T    TT  G  AT  GVTNTLG G  I  +PPYLAMTYYIAA NGIYPSR
Sbjct: 221 NAATAPVSITSGGATTAIGGSATATGVTNTLGTGAAIPTMPPYLAMTYYIAAANGIYPSR 280

Query: 241 D 241
           D
Sbjct: 281 D 281


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.310    0.129    0.367 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 834,875
Number of extensions: 37255
Number of successful extensions: 116
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 115
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 1,619,870
Length adjustment: 83
Effective length of query: 159
Effective length of database: 1,226,865
Effective search space: 195071535
Effective search space used: 195071535
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 129 (54.3 bits)