BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0081.p
         (349 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310581|ref|YP_003774673.1| glycosyltransferase [Herbaspiri...   654   0.0  
gi|300312063|ref|YP_003776155.1| glycosyltransferase 1 protein [...    72   7e-14

>gi|300310581|ref|YP_003774673.1| glycosyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 349

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/347 (89%), Positives = 327/347 (94%)

Query: 1   MRIAIISDAGEPQVNGVVNTLRSTVRCLRGLGHEVLLLSPRDFRTFACPTYPEIRLAYKP 60
           MRIAIISDAGEPQVNGVVNTLRSTVRCLR LGHEVLLLSPRDFRTFACPTYPEIRLAY+P
Sbjct: 1   MRIAIISDAGEPQVNGVVNTLRSTVRCLRALGHEVLLLSPRDFRTFACPTYPEIRLAYQP 60

Query: 61  YARIVAALEAFQPDCIHIATEGPMGLAARRYCVRHKLSFTTAYHTRFPEYLAARKLLPKA 120
           YARI +ALE+FQPDCIHIATEGPMGLAARRYC+R KLSFTTAYHTRFPEYLAARKLLPKA
Sbjct: 61  YARIASALESFQPDCIHIATEGPMGLAARRYCLRRKLSFTTAYHTRFPEYLAARKLLPKA 120

Query: 121 ITYRLLRWFHGRSEAIMVPTPAMKTALEEEGFRNVVLWGRGVDTNHFRPAVEDHACIERP 180
           +TYRLLRWFHGRSEAIMVPTPAMKTALEE+GF  VVLWGRGVDT HFRPAVEDHACI+RP
Sbjct: 121 LTYRLLRWFHGRSEAIMVPTPAMKTALEEQGFNKVVLWGRGVDTTHFRPAVEDHACIDRP 180

Query: 181 LFLYVGRVAVEKNIEAFLKLDLPGTKWVVGDGPQLEDLSARYPEVRFLGAKGHDELPAYY 240
           LFLYVGRVAVEKNIEAFLKLDLPGTKWVVGDGPQLE+L+ RYPEVRFLGAKG DELPAYY
Sbjct: 181 LFLYVGRVAVEKNIEAFLKLDLPGTKWVVGDGPQLEELTQRYPEVRFLGAKGQDELPAYY 240

Query: 241 NCADVFVFPSKTDTFGLVLLEAMACGIPVAAYPVEGPIDVVDNGVSGILRQDLKQACLQA 300
           NCADVFVFPSKTDTFGLVLLEAMACG+PVAAYPVEGPIDVVDNGVSGILR DL+QACLQA
Sbjct: 241 NCADVFVFPSKTDTFGLVLLEAMACGVPVAAYPVEGPIDVVDNGVSGILRHDLRQACLQA 300

Query: 301 MKLDHEAVRAHAATRSWESATQQFLQHLHLAHRSAPGKAAAIKPVRE 347
           + LD +AV AHA +RSWESATQQFLQHLHLA R    K A IKP+RE
Sbjct: 301 LTLDRQAVHAHARSRSWESATQQFLQHLHLARRPVADKTAVIKPLRE 347


>gi|300312063|ref|YP_003776155.1| glycosyltransferase 1 protein
           [Herbaspirillum seropedicae SmR1]
          Length = 391

 Score = 72.0 bits (175), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 105/228 (46%), Gaps = 22/228 (9%)

Query: 124 RLLRWFHGRSEAIMVPTPAMKTALEEEGFR--NVVLWGRGVDTNHFRP----AVEDHACI 177
           +++RW   ++  I+    A++  L   G     VV    GVD   FRP    AV     I
Sbjct: 157 KMIRWAADQAAGIITVCNALRDELIVLGADPDKVVALRNGVDLQLFRPLEREAVRRELEI 216

Query: 178 ERPLFLYVGRVAVEKNIEAFLKL--DLPGTKWVV-GDGPQ---LEDLSARY---PEVRFL 228
                L VG +A  K  +  +     LP  + ++ G GP+   LE L+A+      VRFL
Sbjct: 217 TGFTLLSVGNLAPVKGHDLTIAALPRLPEARLLIAGSGPEQARLEALAAQLGVRERVRFL 276

Query: 229 GAKGHDELPAYYNCADVFVFPSKTDTFGLVLLEAMACGIPVAAYPVEGPIDVVDNGVSGI 288
           GA     L  YYN AD+ V  S  + +  VLLE+MACG PV A  V G  +VV +  +G+
Sbjct: 277 GALPQSALCRYYNAADMMVLASAREGWANVLLESMACGTPVVASKVWGTPEVVAHPDAGL 336

Query: 289 LRQD-------LKQACLQAMKLDHEAVRAHAATRSWESATQQFLQHLH 329
           L Q+            LQA      A R +A   SW++ TQ  LQ  H
Sbjct: 337 LMQERSAAGIAAAVRALQAAAPTRAATRRYAEGFSWDATTQGQLQLFH 384


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.324    0.139    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,156,296
Number of extensions: 48969
Number of successful extensions: 165
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 165
Number of HSP's successfully gapped: 2
Length of query: 349
Length of database: 1,619,870
Length adjustment: 86
Effective length of query: 263
Effective length of database: 1,212,660
Effective search space: 318929580
Effective search space used: 318929580
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 131 (55.1 bits)