BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0036.0372.p
         (555 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311398|ref|YP_003775490.1| phosphate starvation-inducible ...  1072   0.0  
gi|300310057|ref|YP_003774149.1| phosphate starvation-inducible ...   107   2e-24

>gi|300311398|ref|YP_003775490.1| phosphate starvation-inducible
           ATPase [Herbaspirillum seropedicae SmR1]
          Length = 566

 Score = 1072 bits (2773), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 525/555 (94%), Positives = 530/555 (95%), Gaps = 1/555 (0%)

Query: 1   MLSPEDYPKADRNKPVKPNITLVETSAPVVAPQAVAVAVADVSDTKVTAPRARITGKTAA 60
           MLSPEDYPKADR+KPVKPNITLVET+        VA     V        RARITGKT  
Sbjct: 13  MLSPEDYPKADRSKPVKPNITLVETTPAPAVASPVAAVAPAVEAKAAAP-RARITGKTTT 71

Query: 61  VAEKPKAAPKSAEARPKSPTSRVADKLGKSKLFVLDTNVLMHDPTSLFRFEEHDIYLPMV 120
           VAEKPK APKSAE RPKSPTSRVADKLGKSKLFVLDTNVLMHDPTSLFRFEEHDIYLPMV
Sbjct: 72  VAEKPKTAPKSAEIRPKSPTSRVADKLGKSKLFVLDTNVLMHDPTSLFRFEEHDIYLPMV 131

Query: 121 TLEELDNHKKGMSEVARNARQISRSLDALVSDVAEDSIDLGIPLSKLGNKDAKGRLYFQT 180
           TLEELDNHKKGMSEVARNARQISRSLDALVSDVAEDSIDLGIPL+KLGNKDAKGRLYFQT
Sbjct: 132 TLEELDNHKKGMSEVARNARQISRSLDALVSDVAEDSIDLGIPLAKLGNKDAKGRLYFQT 191

Query: 181 KLQNAALPEGLPEGKADNQILGVVRALDQQYPERPVVLVSKDINMRLKARAIGLPAEDYF 240
           KLQNAALPEGLPEGKADNQILGVVRALDQQYPERPVVLVSKDINMRLKARAIGLPAEDYF
Sbjct: 192 KLQNAALPEGLPEGKADNQILGVVRALDQQYPERPVVLVSKDINMRLKARAIGLPAEDYF 251

Query: 241 NDHVLEDTDLLYSGIQQLPDDFWNKHGKGMESWQESRHGTSYTYYRVTGPYVPSLLVNQF 300
           NDHVLEDTDLLYSGIQQLPDDFWNKHGKGMESWQESRHG+SYTYYRVTGPYVPSLLVNQF
Sbjct: 252 NDHVLEDTDLLYSGIQQLPDDFWNKHGKGMESWQESRHGSSYTYYRVTGPYVPSLLVNQF 311

Query: 301 VFIEPKNGEPAFYGQVSQINGKTAVLQTLRDFGHAKNSVWGITARNREQNFALNLLMNPE 360
           VFIEPKNGEPAFYGQV+QINGKTAVLQTLRDFGHAKNSVWGITARNREQNFALNLLMNPE
Sbjct: 312 VFIEPKNGEPAFYGQVTQINGKTAVLQTLRDFGHAKNSVWGITARNREQNFALNLLMNPE 371

Query: 361 CDFVTLLGQAGTGKTLLALASGLAQVLETKLYNEIIVTRVTVPVGEDIGFLPGTEEEKMG 420
           CDFVTLLGQAGTGKTLLALASGLAQVLETKLYNEIIVTRVTVPVGEDIGFLPGTEEEKMG
Sbjct: 372 CDFVTLLGQAGTGKTLLALASGLAQVLETKLYNEIIVTRVTVPVGEDIGFLPGTEEEKMG 431

Query: 421 PWMGAFDDNLEVLNKSDGDAGEWGRAATQDLIRSRIKIKSLNFMRGRTFVNKFLIIDEAQ 480
           PWMGAFDDNLEVLNKSDGDAGEWGRAATQDLIRSRIKIKSLNFMRGRTFVNKFLIIDEAQ
Sbjct: 432 PWMGAFDDNLEVLNKSDGDAGEWGRAATQDLIRSRIKIKSLNFMRGRTFVNKFLIIDEAQ 491

Query: 481 NLTPKQMKTLVTRAGPGTKIVCLGNIAQIDTPYLTEGSSGLTYVVDRFKGWAHSGHVTLA 540
           NLTPKQMKTLVTRAGPGTKIVCLGNIAQIDTPYLTEGSSGLTYVVDRFKGWAHSGHVTLA
Sbjct: 492 NLTPKQMKTLVTRAGPGTKIVCLGNIAQIDTPYLTEGSSGLTYVVDRFKGWAHSGHVTLA 551

Query: 541 RGERSRLADHASDVL 555
           RGERSRLADHASDVL
Sbjct: 552 RGERSRLADHASDVL 566


>gi|300310057|ref|YP_003774149.1| phosphate starvation-inducible
           ATPase [Herbaspirillum seropedicae SmR1]
          Length = 373

 Score =  107 bits (267), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 94/176 (53%), Gaps = 13/176 (7%)

Query: 336 KNSVWGITARNREQNFALNLLMNPECDFVTLLGQAGTGKTLLALASGLAQVLETKLYNEI 395
           K     +  R   Q+  LN ++  E D    +G AGTGKT LA+A  +   LE      I
Sbjct: 132 KTRKHDLRGRTPHQSQYLNAIL--EHDITFGVGPAGTGKTYLAVACAV-DALERDAVQRI 188

Query: 396 IVTRVTVPVGEDIGFLPGTEEEKMGPWMGAFDDNLEVLNKSDGDAGEWGRAATQDLIRSR 455
           ++TR  V  GE +GFLPG   +K+ P++    D L  L          G   TQ L   +
Sbjct: 189 VLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDL---------LGFDRTQKLFEKQ 239

Query: 456 -IKIKSLNFMRGRTFVNKFLIIDEAQNLTPKQMKTLVTRAGPGTKIVCLGNIAQID 510
            I+I  L +MRGRT  + F+I+DEAQN TP+QMK  +TR G G+K V  G++ Q+D
Sbjct: 240 AIEIAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVITGDVTQVD 295


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.316    0.134    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,580,997
Number of extensions: 65060
Number of successful extensions: 215
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 212
Number of HSP's successfully gapped: 2
Length of query: 555
Length of database: 1,619,870
Length adjustment: 90
Effective length of query: 465
Effective length of database: 1,193,720
Effective search space: 555079800
Effective search space used: 555079800
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 133 (55.8 bits)