BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0323.p (202 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300311442|ref|YP_003775534.1| acyl-carrier-protein phosphodie... 392 e-110 gi|300313224|ref|YP_003777316.1| [acyl-carrier-protein] phosphod... 166 1e-42 gi|300309901|ref|YP_003773993.1| acyl carrier protein phosphodie... 157 6e-40 gi|300313768|ref|YP_003777860.1| acyl carrier protein phosphodie... 147 5e-37 gi|300312299|ref|YP_003776391.1| acyl carrier protein phosphodie... 84 7e-18 >gi|300311442|ref|YP_003775534.1| acyl-carrier-protein phosphodiesterase [Herbaspirillum seropedicae SmR1] Length = 202 Score = 392 bits (1007), Expect = e-110, Method: Compositional matrix adjust. Identities = 193/202 (95%), Positives = 194/202 (96%) Query: 1 MSTLLHIDSSARSGGSISRQLTASFAQQWQAKNPGGKVVHRDLAANALPHLSESMLGAYF 60 MSTLLHIDSSARSGGSISRQLTASF QWQAKNPGGKVVHRDLAANALPHLSESMLGAYF Sbjct: 1 MSTLLHIDSSARSGGSISRQLTASFVSQWQAKNPGGKVVHRDLAANALPHLSESMLGAYF 60 Query: 61 TPADARSAEQAEVIKQSDALVDELLAADTIVIGVPMYNFAPPSTLKAWIDHVFRAGRTFS 120 TPADARSAEQAEVIKQSDALVDELLAADTIVIGVPMYNFAPPSTLKAWIDHVFRAGRTF Sbjct: 61 TPADARSAEQAEVIKQSDALVDELLAADTIVIGVPMYNFAPPSTLKAWIDHVFRAGRTFK 120 Query: 121 YTETGPVGLVKGKKAVIILSRGGKYSEGPMEALDFQGKYLKGALGFIGITDVELVVAEGV 180 YTETGPVGLV GKKAVIILSRGG YSEGPMEALDFQGKYLK ALGFIGITDVELVVAEGV Sbjct: 121 YTETGPVGLVTGKKAVIILSRGGMYSEGPMEALDFQGKYLKSALGFIGITDVELVVAEGV 180 Query: 181 SMGEEAAKAAVAGAEAKINATV 202 SMGEEAAK AVA AEAKINA+V Sbjct: 181 SMGEEAAKQAVASAEAKINASV 202 >gi|300313224|ref|YP_003777316.1| [acyl-carrier-protein] phosphodiesterase [Herbaspirillum seropedicae SmR1] Length = 203 Score = 166 bits (419), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 91/182 (50%), Positives = 120/182 (65%), Gaps = 2/182 (1%) Query: 4 LLHIDSSARSGGSISRQLTASFAQQWQAKNPGGKVVHRDLAANALPHLSESMLGAYFTPA 63 LLH+D+S S+SRQL+A ++ P +V++RDLAA A HLS L A+ Sbjct: 3 LLHLDTSILGEHSVSRQLSADIVAHLRSLQPDLEVIYRDLAAAAPRHLSAEHLAAFGGAE 62 Query: 64 DARSAEQAEVIKQSDALVDELLAADTIVIGVPMYNFAPPSTLKAWIDHVFRAGRTFSYTE 123 A +A+ + A +DELL AD +VIG PMYNF+ PS LKAWID V AG TF+YT+ Sbjct: 63 VDDPALRAD-LALGQACLDELLQADLLVIGAPMYNFSLPSQLKAWIDRVAVAGTTFAYTD 121 Query: 124 TGPVGLVKGKKAVIILSRGGKYSEGPME-ALDFQGKYLKGALGFIGITDVELVVAEGVSM 182 GP GL+KG++A I RGG+Y+EG E ALD Q +YL+ LGF+GI DV +V AEGV+M Sbjct: 122 AGPEGLLKGRRAYIASVRGGQYAEGTAEAALDHQERYLRDLLGFLGIVDVSVVRAEGVAM 181 Query: 183 GE 184 G+ Sbjct: 182 GD 183 >gi|300309901|ref|YP_003773993.1| acyl carrier protein phosphodiesterase [Herbaspirillum seropedicae SmR1] Length = 205 Score = 157 bits (397), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 85/199 (42%), Positives = 116/199 (58%), Gaps = 1/199 (0%) Query: 1 MSTLLHIDSSARSGGSISRQLTASFAQQWQAKNPGGKVVHRDLAANALPHLSESMLGAYF 60 M+ +L I SS R S+S + A+ +A + G V RDL A+ LPH++ + + Sbjct: 1 MTHVLLITSSPRGADSLSSRFATEIAEGIKASSAGTLKV-RDLIADPLPHITSAYIQGRL 59 Query: 61 TPADARSAEQAEVIKQSDALVDELLAADTIVIGVPMYNFAPPSTLKAWIDHVFRAGRTFS 120 T + R+ +Q + + LVDEL AAD +VIG M NF P S LKAW DHV TF+ Sbjct: 60 TAPENRTPDQVAAVALAQELVDELKAADIVVIGSGMINFGPSSQLKAWFDHVTWPSVTFA 119 Query: 121 YTETGPVGLVKGKKAVIILSRGGKYSEGPMEALDFQGKYLKGALGFIGITDVELVVAEGV 180 Y + GP GL+ GKK ++ + GG +SEG A DFQ YL L FIG++DVE+V EG Sbjct: 120 YDDNGPKGLLTGKKTYLVAAAGGVFSEGIWAAFDFQSNYLLHLLSFIGLSDVEMVCVEGT 179 Query: 181 SMGEEAAKAAVAGAEAKIN 199 G +AAKAA+A EA + Sbjct: 180 VFGPDAAKAAIANTEAAVQ 198 >gi|300313768|ref|YP_003777860.1| acyl carrier protein phosphodiesterase [Herbaspirillum seropedicae SmR1] Length = 208 Score = 147 bits (372), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 85/184 (46%), Positives = 111/184 (60%), Gaps = 3/184 (1%) Query: 4 LLHIDSSARSGGSISRQLTASFAQQWQAKNPGGKVVHRDLAANALPHLSESMLGAYFTP- 62 +LH+DSS + S SR L+A+ ++ + +P +V RDLAA + HL + + P Sbjct: 3 ILHLDSSILAEASASRVLSAAVVEELRILHPTAQVSVRDLAAAPIAHLDGPIAAGFRQPG 62 Query: 63 ADARSAEQAEVIKQSDALVDELLAADTIVIGVPMYNFAPPSTLKAWIDHVFRAGRTFSYT 122 A+ S E S+ LV + L +D IV+GVPMYNF+ PS LKAW+D V + GRTF YT Sbjct: 63 ANHASPEVRAEQALSETLVSQFLNSDVIVLGVPMYNFSIPSQLKAWLDRVAQPGRTFRYT 122 Query: 123 ETGPVGLVKGKKAVIILS-RGGKYSEGPMEALDFQGKYLKGALGFIGITDVELVVAEGVS 181 E GP+GL G+KAVII S RGG YS GP +D Q YLK GF+GI V V AE + Sbjct: 123 ENGPLGL-SGEKAVIIASTRGGMYSSGPAAVMDHQEAYLKAFFGFLGIERVRFVRAERLI 181 Query: 182 MGEE 185 G E Sbjct: 182 KGAE 185 >gi|300312299|ref|YP_003776391.1| acyl carrier protein phosphodiesterase [Herbaspirillum seropedicae SmR1] Length = 208 Score = 84.3 bits (207), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 64/176 (36%), Positives = 90/176 (51%), Gaps = 7/176 (3%) Query: 4 LLHIDSSARSGGSISRQLTASFAQQWQAKNPGGKVVHRDLAANALPHLSESMLGA---YF 60 +LHI+SS+R S S QLT F ++ + K+ +V DL + LP E +GA F Sbjct: 3 ILHINSSSRGADSRSLQLTEVFLRELE-KHKAIEVDRFDLFSGELPAFGELAVGAKMAMF 61 Query: 61 TPADARSAEQAEVIKQSDALVDELLAADTIVIGVPMYNFAPPSTLKAWIDHVFRAGRTFS 120 T A+A S EQ A+ D +AD VI VP++N P LK +ID V + G F Sbjct: 62 TGAEATS-EQKHAWASIKAVFDRFASADAYVINVPLWNNGLPYVLKQFIDVVTQPGWAFG 120 Query: 121 YT-ETGPVGLVKGKKAVIILSRGGKYSEGPME-ALDFQGKYLKGALGFIGITDVEL 174 + E G GL+K +KA II + G + P DF YL L F+GI + ++ Sbjct: 121 FDLENGYSGLLKNRKACIIHASGVYHPGIPTNFGSDFSTPYLTDWLKFVGIEEADI 176 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.315 0.131 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 585,119 Number of extensions: 23456 Number of successful extensions: 72 Number of sequences better than 1.0e-08: 5 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 5 Length of query: 202 Length of database: 1,619,870 Length adjustment: 81 Effective length of query: 121 Effective length of database: 1,236,335 Effective search space: 149596535 Effective search space used: 149596535 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 128 (53.9 bits)