BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0036.0300.p
         (165 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311461|ref|YP_003775553.1| acyltransferase [Herbaspirillum...   270   3e-74

>gi|300311461|ref|YP_003775553.1| acyltransferase [Herbaspirillum
           seropedicae SmR1]
          Length = 165

 Score =  270 bits (691), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 131/160 (81%), Positives = 144/160 (90%), Gaps = 2/160 (1%)

Query: 8   SLPVS--HPRFGRLQFAAMGASDLDAVVRIEEAVYSHPWTRGNFQDSLYSGYQAQTLRDA 65
           +LPV+  H ++G LQFA M + DLDAVV IE+AVYSHPWTRGNFQDSLYSGYQAQTLRD+
Sbjct: 6   TLPVAVVHEKYGSLQFAPMSSEDLDAVVEIEQAVYSHPWTRGNFQDSLYSGYQAQTLRDS 65

Query: 66  HGELLGYFLVMLAVDEAHLLNISVAALHQHQGLGRMLLDQATGLARQHHMRTMLLEVRES 125
            G+LLGYFLVMLAV+EAHLLNISVAA HQHQGLGR+LLD+AT LARQH M  MLLEVRES
Sbjct: 66  AGQLLGYFLVMLAVEEAHLLNISVAAAHQHQGLGRLLLDRATALARQHGMHIMLLEVRES 125

Query: 126 NVHAAKVYRQYGFTEIGRRKNYYPAANQTREGAIVMSLPL 165
           N+HAAKVYR YGF EIGRRKNYYPAANQ+REGAIVMSLPL
Sbjct: 126 NLHAAKVYRHYGFAEIGRRKNYYPAANQSREGAIVMSLPL 165


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.322    0.134    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 505,238
Number of extensions: 19050
Number of successful extensions: 55
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 55
Number of HSP's successfully gapped: 1
Length of query: 165
Length of database: 1,619,870
Length adjustment: 78
Effective length of query: 87
Effective length of database: 1,250,540
Effective search space: 108796980
Effective search space used: 108796980
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 127 (53.5 bits)