BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0036.0254.p
         (292 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311505|ref|YP_003775597.1| acyl-[acyl-carrier-protein]-UDP...   513   e-147
gi|300313491|ref|YP_003777583.1| UDP-3-O-[3-hydroxymyristoyl] gl...    63   2e-11

>gi|300311505|ref|YP_003775597.1|
           acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
           O-acyltransferase [Herbaspirillum seropedicae SmR1]
          Length = 262

 Score =  513 bits (1320), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 249/262 (95%), Positives = 257/262 (98%)

Query: 31  MSKIHPSAVIAPGAQIDESVEIGAYAVIGPDVRIGAGTRIGPHVVIEGHTTIGRDNEIFQ 90
           MSKIHPSA+IAPGAQIDESVEIGAYAVIG DVRIGAGTRIGPHVVIEGHT IGRDNEIFQ
Sbjct: 1   MSKIHPSAIIAPGAQIDESVEIGAYAVIGADVRIGAGTRIGPHVVIEGHTRIGRDNEIFQ 60

Query: 91  FASIGAAPQDKKYAGEPTTMEIGDRNTIREFVTFNRGTVQDGGATRIGNDNWIMAYVHLA 150
           FASIGAAPQDKKYAGEPTTMEIGDRNTIREFVTFNRGTVQD GATRIGNDNWIMAYVHLA
Sbjct: 61  FASIGAAPQDKKYAGEPTTMEIGDRNTIREFVTFNRGTVQDAGATRIGNDNWIMAYVHLA 120

Query: 151 HDCQLGSHIILANNATLAGHVHLGDHVFLGGFTTVHQFCHIGAHAMTAFTAAVSQDVPPF 210
           HDCQLG++IILANNATLAGHVHLGDHVFLGGFTTVHQFCHIGAHAMTAFTAAVSQDVPPF
Sbjct: 121 HDCQLGNNIILANNATLAGHVHLGDHVFLGGFTTVHQFCHIGAHAMTAFTAAVSQDVPPF 180

Query: 211 VTAAGNRAVPAGINSEGLKRRGFTSEQIMEIKRAYKVIYRAGLPLEEAKQQLAEMEAKSA 270
           VTAAGNRAVPAGINSEGLKRRGFTSEQIMEIKRAYKVIYRAGLPLEEAKQ+LA+MEA SA
Sbjct: 181 VTAAGNRAVPAGINSEGLKRRGFTSEQIMEIKRAYKVIYRAGLPLEEAKQELAQMEASSA 240

Query: 271 HSAEHIRLLREFIEASARGIIR 292
           +SA++IRL REFIEASARGIIR
Sbjct: 241 NSAQYIRLFREFIEASARGIIR 262


>gi|300313491|ref|YP_003777583.1| UDP-3-O-[3-hydroxymyristoyl]
           glucosamine N-acyltransferase [Herbaspirillum
           seropedicae SmR1]
          Length = 302

 Score = 63.2 bits (152), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 79/181 (43%), Gaps = 7/181 (3%)

Query: 34  IHPSAVIAPGAQIDESVEIGAYAVIGPDVRIGAGTRIGPHVVIEGHTTIGRDNEIFQFAS 93
           I P   I  G  I++ V+IG    I     IG G+RIG    I   T IG +  +  F +
Sbjct: 108 IAPGVSIGEGVIIEDDVQIGENTRIETGALIGRGSRIGARSRIGARTVIGNEG-LGSFET 166

Query: 94  IGAAPQDKKYAGEPTTMEIGDRNTIREFVTFNRGTVQDGGATRIGNDNWIMAYVHLAHDC 153
                ++ ++ G    + IGD   I       RGT+ D   T IGN+  I   V++ H+ 
Sbjct: 167 ADGQLRNVRHLGN---VRIGDDVEIGALCAVGRGTIDD---TVIGNNTHIGPQVNIGHNS 220

Query: 154 QLGSHIILANNATLAGHVHLGDHVFLGGFTTVHQFCHIGAHAMTAFTAAVSQDVPPFVTA 213
            +G    +A  + L+G V + D   L    T+     IGA A     A V+ DV P  T 
Sbjct: 221 VIGMRCQIAGRSHLSGSVVIEDEAKLWANCTLKDGVRIGAGATVGMGALVNHDVLPGQTV 280

Query: 214 A 214
           A
Sbjct: 281 A 281


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.321    0.136    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 944,356
Number of extensions: 40709
Number of successful extensions: 182
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 155
Number of HSP's successfully gapped: 3
Length of query: 292
Length of database: 1,619,870
Length adjustment: 84
Effective length of query: 208
Effective length of database: 1,222,130
Effective search space: 254203040
Effective search space used: 254203040
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 130 (54.7 bits)