BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0163.p
         (298 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310461|ref|YP_003774553.1| histone acetyltransferase HPA2 ...   542   e-155
gi|300310457|ref|YP_003774549.1| GNAT family acetyltransferase [...   269   2e-73

>gi|300310461|ref|YP_003774553.1| histone acetyltransferase HPA2
           protein [Herbaspirillum seropedicae SmR1]
          Length = 295

 Score =  542 bits (1396), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 266/298 (89%), Positives = 276/298 (92%), Gaps = 3/298 (1%)

Query: 1   MTTQSTLPAGQAVQTVQTTLRPMRPEDLASCHAMSLHLYWPHRLADWQFHHQVSSSWAVE 60
           M T STL AGQA QT   TLRPMRPEDLASCHAMSLHL+WPHRLADWQFHHQVSSSWAVE
Sbjct: 1   MHTDSTLTAGQAAQT---TLRPMRPEDLASCHAMSLHLHWPHRLADWQFHHQVSSSWAVE 57

Query: 61  LEEPDGTRSVAGSGMLCPLGEDYASLGLVIITDALQGRGLGRAMMQRLLQDAGTRNVILN 120
           LE+PDG RSVAGSGMLCPLGEDYASLGLVII DALQGRGLGRAMMQRLLQDAG+RNVILN
Sbjct: 58  LEQPDGARSVAGSGMLCPLGEDYASLGLVIIADALQGRGLGRAMMQRLLQDAGSRNVILN 117

Query: 121 ATEAGRPLYEKLGFVVTDTLSQHQSTTARANPVLAAGARIRPLRKDEVPYLLALDRQASG 180
           AT+AGRPLYEKLGF VTDTLSQHQSTTARA PVLAA ARIRPLRK+E P  LALDRQASG
Sbjct: 118 ATDAGRPLYEKLGFAVTDTLSQHQSTTARAQPVLAADARIRPLRKEEAPAFLALDRQASG 177

Query: 181 MDRSALLVPLLDTSEVAVLEQAGQVKGVAYLREFGRGRVIGPVIASNVEDAKTLIAYWIN 240
           MDRS LL PLL T+EVAVLEQAGQVKGVA LREFGRGRVIGPVIAS VEDAK LIA+W++
Sbjct: 178 MDRSTLLQPLLATAEVAVLEQAGQVKGVAMLREFGRGRVIGPVIASQVEDAKALIAHWVH 237

Query: 241 AYPGAYLRIDVPGRTGLKPWLEEIGLTCVDNVVSMCRGTPPAPATAWRTYSMINQALG 298
           AYPGAYLRIDVPGRTGLKPWLEEIGLTCVDNVVSMCRGTPP+PAT WRTYSMINQALG
Sbjct: 238 AYPGAYLRIDVPGRTGLKPWLEEIGLTCVDNVVSMCRGTPPSPATPWRTYSMINQALG 295


>gi|300310457|ref|YP_003774549.1| GNAT family acetyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 300

 Score =  269 bits (687), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 139/299 (46%), Positives = 192/299 (64%), Gaps = 10/299 (3%)

Query: 8   PAGQAVQTVQT-----TLRPMRPEDLASCHAMSLHLYWPHRLADWQFHHQVSSSWAVELE 62
           P+    QTV+       LRPM  +DLA CH +SL   WPHRL DW F  Q    + +E  
Sbjct: 4   PSTHDPQTVRAPLPDLLLRPMEADDLAHCHRLSLRFKWPHRLEDWNFLLQRGQGYLLENT 63

Query: 63  EPDGTRSVAGSGMLCPLGEDYASLGLVIITDALQGRGLGRAMMQRLLQDAGTRNVILNAT 122
           + +    V GS +  P G  +A +G++++   LQ RGLGR +MQ+        ++I+NAT
Sbjct: 64  DAEAPLRVVGSVVCTPYGAHHAVIGMLLVQAELQRRGLGRRLMQQAASAVQGHSLIVNAT 123

Query: 123 EAGRPLYEKLGFVVTDTLSQHQSTTARANPVLAA---GARIRPLRKDEVPYLLALDRQAS 179
            AG PLY++LGFV  D L Q Q ++A+  PVL +   G R+RP+ K++VP LLALD QA+
Sbjct: 124 AAGMPLYKQLGFVQQDVLHQFQGSSAQ--PVLVSLPPGERVRPMGKNDVPRLLALDAQAT 181

Query: 180 GMDRSALLVPLLDTSEVAVLEQAGQVKGVAYLREFGRGRVIGPVIASNVEDAKTLIAYWI 239
           GMDRS LL+ LLD SE   L++ G++ G A +R FG GRVIGPV+A + E AK LIA+WI
Sbjct: 182 GMDRSKLLLALLDMSEAVALDRDGEMLGFALVRRFGHGRVIGPVVAPDAERAKGLIAHWI 241

Query: 240 NAYPGAYLRIDVPGRTGLKPWLEEIGLTCVDNVVSMCRGTPPAPATAWRTYSMINQALG 298
           N Y  +++R+DV   TGL  WL+++GLTCVD+V  MC+G PP      + +S++NQALG
Sbjct: 242 NTYSDSFIRLDVFESTGLPSWLDKLGLTCVDHVTRMCKGEPPVRDPGMQLFSIVNQALG 300


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.319    0.134    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 995,779
Number of extensions: 44016
Number of successful extensions: 178
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 175
Number of HSP's successfully gapped: 2
Length of query: 298
Length of database: 1,619,870
Length adjustment: 85
Effective length of query: 213
Effective length of database: 1,217,395
Effective search space: 259305135
Effective search space used: 259305135
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 130 (54.7 bits)