BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0058.p
         (388 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311763|ref|YP_003775855.1| cytochrome P450 monooxygenase [...   518   e-148

>gi|300311763|ref|YP_003775855.1| cytochrome P450 monooxygenase
           [Herbaspirillum seropedicae SmR1]
          Length = 391

 Score =  518 bits (1334), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 281/390 (72%), Positives = 311/390 (79%), Gaps = 7/390 (1%)

Query: 1   MPLHWSSAHCGGAWVITGYEEVAAALRDPRFSVRRAARWINSGLGDTGNGQQDEAQRQFK 60
           M + WS+AHCGGAWVI+G+E+VAAALRDPRFSVRRAARWINSGLG  G      A+R+FK
Sbjct: 1   MAVQWSTAHCGGAWVISGHEQVAAALRDPRFSVRRAARWINSGLG--GKQADSAAERRFK 58

Query: 61  RLFSRSLLFLDGRAHRRLRGVLNPGFKPADLQARRGDITALAQRLADDIVTDPQAARGFD 120
           RLFSRSLLFLDGRAHRRLRGVLNPGFKPA L  +   I ALAQ+L DDI+ DPQ+  GFD
Sbjct: 59  RLFSRSLLFLDGRAHRRLRGVLNPGFKPAQLALQAPAIEALAQQLIDDILRDPQSPHGFD 118

Query: 121 FIARFARPLPALVIAQLLGLPDRAPAEFIDWAADLAAFIGSPTPDATQTLAAQQAMRNLC 180
           FI+RFARPLPALVIA+L+GLP   P  FIDWAADLAAFIGSPTPDA QTLAAQ AM+ LC
Sbjct: 119 FISRFARPLPALVIARLMGLPGAVPPAFIDWAADLAAFIGSPTPDAAQTLAAQHAMQALC 178

Query: 181 DFFSQAL--ARADELSEACLLRGLLQAHASGQLNRNELLAQCCTLLFAGYETTRNLLGNG 238
           DFFS  L   +   L    LL  LLQA   GQ+N+ ELLAQC TLLFAGYETTRNLLGNG
Sbjct: 179 DFFSSTLEQEQGQALPPHSLLAQLLQARQQGQINQVELLAQCSTLLFAGYETTRNLLGNG 238

Query: 239 VLALLQDPAQWAALKARHADPAALRLAVREMLRHDSPVQYTGRRLLQEVSLAGQRLQRGQ 298
           +LALL+ P QW  LK   ++P  LR A+REMLRHDSPVQYTGRRLL  V L GQ L RG 
Sbjct: 239 LLALLRHPEQWRLLK---SEPHWLRSAIREMLRHDSPVQYTGRRLLAPVQLDGQTLARGD 295

Query: 299 LAILHIGQANHDARRFRDPQRFDIRRDEGMHLSFGQGPHVCLGAALTQLEAEIAFSVLMQ 358
           LAILHIG ANHDA+R+  PQ FDIRRD+GMHLSFGQGPHVCLGAALTQ+EAEIAF+ LM+
Sbjct: 296 LAILHIGLANHDAKRYHQPQDFDIRRDQGMHLSFGQGPHVCLGAALTQMEAEIAFTALMR 355

Query: 359 RLPTLSLADETPVWQGNAAYRALDRLSVFF 388
           RLPTL+L    PVWQ N AYRAL RL V F
Sbjct: 356 RLPTLALDTAAPVWQDNPAYRALARLPVVF 385


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.325    0.137    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,318,709
Number of extensions: 57690
Number of successful extensions: 253
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 250
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 1,619,870
Length adjustment: 87
Effective length of query: 301
Effective length of database: 1,207,925
Effective search space: 363585425
Effective search space used: 363585425
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 131 (55.1 bits)