BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0033.0069.p (1062 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300313900|ref|YP_003777992.1| cation/multidrug efflux pump pr... 2000 0.0 gi|300313716|ref|YP_003777808.1| cobalt-zinc-cadmium resistance ... 291 2e-79 gi|300311798|ref|YP_003775890.1| cation/multidrug efflux pump pr... 288 2e-78 gi|300310852|ref|YP_003774944.1| cation/multidrug efflux pump tr... 264 3e-71 gi|300309819|ref|YP_003773911.1| acriflavin resistance transmemb... 242 1e-64 >gi|300313900|ref|YP_003777992.1| cation/multidrug efflux pump protein [Herbaspirillum seropedicae SmR1] Length = 1063 Score = 2000 bits (5182), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1023/1063 (96%), Positives = 1050/1063 (98%), Gaps = 1/1063 (0%) Query: 1 MNMVALALRRPYTFIVMALLIVLATPLTLKNMATDIFPEINIPVVSVIWNYNGLSAQEMG 60 MNMVALALRRPYTFIVMALLIVLATPLTLKNMATDIFPEINIPVVS+IWNYNGLSAQEMG Sbjct: 1 MNMVALALRRPYTFIVMALLIVLATPLTLKNMATDIFPEINIPVVSIIWNYNGLSAQEMG 60 Query: 61 QRIAAQNERGLTTVVSDIEHIESQSLAGVAVIKVFFQPKANIQTAIAQVVASVQSQLRQL 120 QRIAAQNERGLTTVVSDIEHIESQSLAGV+VIKVFFQPKANIQTAIAQVVASVQ+Q+RQL Sbjct: 61 QRIAAQNERGLTTVVSDIEHIESQSLAGVSVIKVFFQPKANIQTAIAQVVASVQTQVRQL 120 Query: 121 PPGITPPLVIKYSASSIPVMQLALSSPTLPEQTVFDTAVQTLRPQLITIPGVAVPFPYGG 180 PPGITPPLVIKYSASSIPVMQLALSSPTLPEQTVFD AVQTLRPQL+TIPGVAVP+PYGG Sbjct: 121 PPGITPPLVIKYSASSIPVMQLALSSPTLPEQTVFDAAVQTLRPQLVTIPGVAVPYPYGG 180 Query: 181 KTRLISVDLDTPALQSRGLSPIDVVNAINTQNLILPSGTAKFGGTEYSVKLNGSPEAVAG 240 K+RLISVDLDT ALQ+RGL+PIDVVNAINTQNLILPSGTAKFG TEYSVK+NGSPEAVAG Sbjct: 181 KSRLISVDLDTQALQARGLAPIDVVNAINTQNLILPSGTAKFGATEYSVKINGSPEAVAG 240 Query: 241 LNELPVRTANGATIYLKDVANVRDGFSPQTNVVRQDGARGVLLSILKNGGASTLDIVDNL 300 LNELPVRT NGATIYLKDVANVRDGFSPQTNVVRQDGARGVLLSILKNGGASTLDIVDNL Sbjct: 241 LNELPVRTTNGATIYLKDVANVRDGFSPQTNVVRQDGARGVLLSILKNGGASTLDIVDNL 300 Query: 301 RKLLPTAAQTLPEDIKITPLFDQSLFVKAAVTGVISEALIAAGLTAAMVLLFLGNWRSTL 360 RKLLPTAAQTLPEDIKITPLFDQS+FVKAAVTGVISEALIAAGLTAAMVLLFLGNWRSTL Sbjct: 301 RKLLPTAAQTLPEDIKITPLFDQSVFVKAAVTGVISEALIAAGLTAAMVLLFLGNWRSTL 360 Query: 361 IIGLTIPLSIMAAILMLAALGETLNLMTLGGLALSVGILVDQAIVTIENIERHLHLGKPL 420 IIGLTIPLSIMAAIL+LAALGETLNLMTLGGLALSVGILVDQAIVTIENIERHLHLGKPL Sbjct: 361 IIGLTIPLSIMAAILILAALGETLNLMTLGGLALSVGILVDQAIVTIENIERHLHLGKPL 420 Query: 421 HDAIIVGAGEIGVPAFVATLCICIVFVPMFFLSGVARFLFVPLAEAVVFAMAASYLLSRT 480 HDAIIVGAGEIGVPAFVATLCICIVFVPMFFLSGVARFLFVPLAEAVVFAMAASYLLSRT Sbjct: 421 HDAIIVGAGEIGVPAFVATLCICIVFVPMFFLSGVARFLFVPLAEAVVFAMAASYLLSRT 480 Query: 481 LVPTLVMLLMGSHGQVDSAKQSLLQRLYRAFDNRFERVRHGYTLVLSSLLAHRRRFALGF 540 LVPTLVMLLMGSHGQVDSAKQSLLQRLYRAFDNRFERVRHGYTLVLSSLLAHRRRFAL F Sbjct: 481 LVPTLVMLLMGSHGQVDSAKQSLLQRLYRAFDNRFERVRHGYTLVLSSLLAHRRRFALAF 540 Query: 541 LGFCLLSCLLYPFLGRDFFPNVDGGQIRLHMRMPTGTRIEETARAADEVERVIRSLIPAS 600 LGFCLLSCLLYPFLGRDFFPNVDGGQIRLHMRMPTGTRIEETARAADEVERVIR+LIPAS Sbjct: 541 LGFCLLSCLLYPFLGRDFFPNVDGGQIRLHMRMPTGTRIEETARAADEVERVIRTLIPAS 600 Query: 601 ELETILDNLGVPNSGINLSYSNAGTIGTLDGEILMALKEGHRPTEELVSLLREQLPRRFP 660 ELETILDNLGVPNSGINLSYSNAGTIGTLDGEILMALKEGHRPTE LVS+LR +LPRRFP Sbjct: 601 ELETILDNLGVPNSGINLSYSNAGTIGTLDGEILMALKEGHRPTEALVSMLRAELPRRFP 660 Query: 661 GIEFFFQPADIVTQILNFGLPAAIDVQFTGPNMEANARLAAELTKQIRQIPGAVDAHVHQ 720 GIEFFFQPADIVTQILNFGLPAAIDVQFTGPNMEANARLAAELTKQIRQIPGAVDAHVHQ Sbjct: 661 GIEFFFQPADIVTQILNFGLPAAIDVQFTGPNMEANARLAAELTKQIRQIPGAVDAHVHQ 720 Query: 721 RLDGPSLDLRMDRTRLQQFGLSAANVGQNLLIALSGSSQTQPAFWLNPNNGVVYSIAVQS 780 RLDGPSLDLRMDRTRLQQFGLSA+NVGQNLLIAL+GSSQTQPAFWLNPNNGVVY+IAVQS Sbjct: 721 RLDGPSLDLRMDRTRLQQFGLSASNVGQNLLIALAGSSQTQPAFWLNPNNGVVYNIAVQS 780 Query: 781 PQYQVDSLDALLNIPVGAGANAA-TPPQLLGNLVDVHAGRQMAVASRYNISPAIDVYVSV 839 PQYQVDSLDALLNIPV GANA+ TPPQLLGNLVDVHAGRQMAVASRYNI+PAIDVYVSV Sbjct: 781 PQYQVDSLDALLNIPVSPGANASTTPPQLLGNLVDVHAGRQMAVASRYNIAPAIDVYVSV 840 Query: 840 QGTDLASVAGKVAKLVEEIKPKLARGSQVVIRGQVETMQSSFIGLGVGLAMAIVLVYLLV 899 QGTDLASVAGKV+ LVE+IKPKLARGSQVVIRGQVETMQSSF GLGVGLAMAIVLVYLLV Sbjct: 841 QGTDLASVAGKVSALVEQIKPKLARGSQVVIRGQVETMQSSFTGLGVGLAMAIVLVYLLV 900 Query: 900 VVNFQSWIDAAIIIAALPAALAGIAWMLFLTGTTLSVPALTGAIMTMGVATANSILIVAF 959 VVNFQSWIDAAIIIAALPAALAGIAWMLF+TGTTLSVPALTGAIMTMGVATANSILIVAF Sbjct: 901 VVNFQSWIDAAIIIAALPAALAGIAWMLFITGTTLSVPALTGAIMTMGVATANSILIVAF 960 Query: 960 ARQRREEGATPLASALEAGSTRIRPVLMTALAMIIGMIPMALGLGEGAEQNAPLGRAVIG 1019 ARQRREEGATPLA+ALEAGSTRIRPVLMTALAMIIGMIPMALGLGEGAEQNAPLGRAVIG Sbjct: 961 ARQRREEGATPLAAALEAGSTRIRPVLMTALAMIIGMIPMALGLGEGAEQNAPLGRAVIG 1020 Query: 1020 GLLLATVSTLFFVPVVFAGVHQRLARRAERRRHLAGGPAHQES 1062 GL+LATVSTLFFVPVVFAGVHQRLARRA++RR LAGGPAHQES Sbjct: 1021 GLMLATVSTLFFVPVVFAGVHQRLARRADQRRALAGGPAHQES 1063 >gi|300313716|ref|YP_003777808.1| cobalt-zinc-cadmium resistance cation efflux system transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 1073 Score = 291 bits (745), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 265/1033 (25%), Positives = 483/1033 (46%), Gaps = 74/1033 (7%) Query: 28 TLKNMATDIFPEINIPVVSVIWNYNGLSAQEMGQRIAAQNERGLTTVVSDIEHIESQSLA 87 + + + D P+I V + + G S E QRI+ E L + + ++E + S S Sbjct: 30 SYQKLPIDAVPDITNVQVQINTSAPGYSPLEAEQRISYPIET-LMSGLPNLEQVRSLSRY 88 Query: 88 GVAVIKVFFQPKANIQTAIAQVVASVQSQLRQLPPGITPPL-VIKYSASSIPVMQL-ALS 145 G++ + V F+ +I A V +Q QLPPGI P + I I + + + Sbjct: 89 GLSQVTVIFKDGTDIYFARQLVNERIQLARSQLPPGIDPGMGPISTGLGEIYLWTVESRD 148 Query: 146 SPTLPEQTVF------DTAVQTLRPQLITIPGVAVPFPYGGKTRLISVDLDTPALQSRGL 199 P+ T + + ++PQL +PGV GG + V L S G+ Sbjct: 149 DARKPDGTPYTATDLREIQDWVIKPQLRLVPGVTEINTIGGFAKEYLVAPSAEKLASYGM 208 Query: 200 SPIDVVNAINTQNLILPSGTAKFGGTEYSVKLNGSPEAVAGLNELPVRTANGATIYLKDV 259 + ++ A+ N + +G + G +Y ++ G ++ + + + G I ++DV Sbjct: 209 TMDTIIKALEKNNSNVGAGYIERRGEQYLIRAPGQVASIDDIGNIVLANVKGVPIRIRDV 268 Query: 260 ANVRDGFSPQTNVVRQDGARGVLLSILKNGGASTLDIVDNLRKLLPTAAQTLPEDIKITP 319 A V G +T ++G VL ++ G ++ + + + + ++LP+ ++ Sbjct: 269 AEVEIGRELRTGAATENGREVVLGTVFMLIGENSRKVSQAVARKMEEINRSLPKGVEAVT 328 Query: 320 LFDQSLFVKAAVTGVISEALIAAGLTAAMVLLFLGNWRSTLIIGLTIPLSIMAAILMLAA 379 ++D+++ V A+ V + A L A++ +FLGN R+ +I + IPL+++ + + Sbjct: 329 VYDRTVLVDKAIATVKKNLVEGALLVVAVLFVFLGNIRAAIITAMVIPLAMLFTFTGMVS 388 Query: 380 LGETLNLMTLGGLALSVGILVDQAIVTIENIERHL-----HLGKPL------HDAIIVGA 428 + NL++LG AL GI++D A+V +EN R L H G+ L H+ + A Sbjct: 389 NKVSANLLSLG--ALDFGIIIDGAVVIVENCVRRLAHAQAHHGRTLTRSERFHE-VFAAA 445 Query: 429 GEIGVPAFVATLCICIVFVPMFFLSGVARFLFVPLAEAVVFAMAASYLLSRTLVPTLVML 488 E P L I IV++PMF L+GV +F P+A VV A+ + +LS T +P + L Sbjct: 446 KEARRPLIFGQLIIMIVYLPMFALTGVEGKMFTPMAFTVVAALIGAMILSVTFIPAAIAL 505 Query: 489 LMGSHGQVDSAKQSLLQRLYRAFDNRFERVRHGYTLVLSSLLAHRRRFALGFLGFCLLSC 548 +G +V + L+ R ++ + + +VL+ F G +L C Sbjct: 506 FIGE--KVAEKENILMLWAKRLYEPMLKTIMENKPVVLT------------FAGALILVC 551 Query: 549 -LLYPFLGRDFFPNVDGGQIRLH-MRMPTGTRIEETARAADEVERVIRSLIPASELETIL 606 ++ LG +F P+++ G + + +R+P GT + ++ ++E+ ++ P E+E + Sbjct: 552 GVVASRLGSEFVPSLNEGDMAIQALRIP-GTSLSQSLEMQKQIEKTLKQKFP--EVERVF 608 Query: 607 DNLGVPNSGINLSYSNAGTIGTLDGEILMALKEG----HRPTEELVSLLREQLPRRFPGI 662 G + N DG I++ +E + EEL+ +++++ + PG Sbjct: 609 ARTGTAEVASDPMPPNIS-----DGYIMLKPQEQWPEPKKSREELLEAIQDEVAK-IPGN 662 Query: 663 EF-FFQPADIVTQILNFGLPAAIDVQFTGPNMEANARLAAELTKQIRQIPGAVDAHVHQR 721 + F QP + L G+ + + V+ G +M+ A++++ + +IPGA + + Q Sbjct: 663 SYEFSQPIQLRFNELISGVRSDVAVKVFGDDMKVLNDTASKISAVLEKIPGATEVKIEQT 722 Query: 722 LDGPSLDLRMDRTRLQQFGLSAANVGQNLLIALSGSSQTQPAFWLNPNNGVVYSIAVQSP 781 P L + +DR + ++GL+ +++ + A+ G + F + G+V V+ P Sbjct: 723 TGLPMLTVEIDREKTARYGLNVSDIQDTVATAIGGK-EAGTMFQGDRRFGIV----VRLP 777 Query: 782 QYQVDSLDALLNIPVGAGANAATPPQL---------LGNLVDVHAGRQMAVASRYNISPA 832 L+A+ +P+ A PPQ LG + + SR + Sbjct: 778 DQARTDLEAIRRLPI------ALPPQEGATRVSYVPLGEVASLTIAPGPNQISREDGKRR 831 Query: 833 IDVYVSVQGTDLASVAGKVAKLVEEIKPKLARGSQVVIRGQVETMQSSFIGLGVGLAMAI 892 I V +V+G DL + + ++ K+ G GQ E +QS+ L + + +A+ Sbjct: 832 IVVSANVRGRDLGGFVAEAERQLQS-AVKVPAGYWTTWGGQFENLQSATQRLQIVIPVAL 890 Query: 893 VLVYLLVVVNFQSWIDAAIIIAALPAALAGIAWMLFLTGTTLSVPALTGAIMTMGVATAN 952 ++V++L+ F + D ++ +P AL G L + G +S+ A G I GVA N Sbjct: 891 LMVFVLLFAMFSNVKDGLLVFTGIPFALTGGILALAMRGIPMSISAAVGFIALSGVAVLN 950 Query: 953 SILIVAFARQRREEGATPLASALEAGSTRIRPVLMTALAMIIGMIPMALGLGEGAEQNAP 1012 +++++F R REEG T A+ E TR+RPVLMTAL +G +PMAL G GAE P Sbjct: 951 GLVMISFIRSLREEGRTLDAAIHEGAMTRLRPVLMTALVASLGFVPMALATGTGAEVQRP 1010 Query: 1013 LGRAVIGGLLLAT 1025 L VIGG+L +T Sbjct: 1011 LATVVIGGILSST 1023 >gi|300311798|ref|YP_003775890.1| cation/multidrug efflux pump protein [Herbaspirillum seropedicae SmR1] Length = 1051 Score = 288 bits (737), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 283/1087 (26%), Positives = 502/1087 (46%), Gaps = 84/1087 (7%) Query: 1 MNMVALALRRPYTFIVMALLIVLATPLTLKNMATDIFPEINIPVVSVIWNYNGLSAQEMG 60 M++ A ++RP ++A+ I+L + P+++ P + V G S + M Sbjct: 1 MSVSAAFIKRPIGTTLLAIAILLVGVAVWPLLPVAPLPQVDFPTIQVTAQLPGGSPETMA 60 Query: 61 QRIAAQNERGLTTVVSDIEHIESQSLAGVAVIKVFFQPKANIQTAIAQVVASVQSQLRQL 120 +A ER + +++ + + SQS G I + F NI A V A++ + QL Sbjct: 61 SNVAQPLERQFS-LIAGLSQMTSQSTLGSTQITLQFDLNRNIDAAALDVQAAINASTGQL 119 Query: 121 PPGI-TPPLVIKYSASSIPVMQLALSSPTLPEQTVFDTAVQTLRPQLITIPGVAVPFPYG 179 P + PP K + + P+M +++ S LP V D A L Q+ I GV + G Sbjct: 120 PANLPNPPTFRKINPADSPIMIMSVQSEALPLTVVNDYADNILAQQISQISGVGLVNVNG 179 Query: 180 GKTRLISVDLDTPALQSRGLSPIDVVNAINTQNLILPSGTAKFGGTEYSVKLNGSPEAVA 239 + + + +D L + GLS D+ I T + P GT ++V N Sbjct: 180 QQKPAVRIQVDPAKLATLGLSLEDIRGVIATTTVNQPKGTVDGARQAFTVYTNDQLLKAE 239 Query: 240 GLNELPVRTANGATIYLKDVANVRDGFSPQTNVVRQ--------------DGARGVLLSI 285 N++ + NGA I +KD+ DG P+ N + R ++L+I Sbjct: 240 QWNDMVLAWRNGAPIRVKDIGIAVDG--PENNKIAAWAFAGAANTADHSITNGRSIVLAI 297 Query: 286 LKNGGASTLDIVDNLRKLLPTAAQTLPEDIKITPLFDQSLFVKAAVTGVISEALIAAGLT 345 K GA+ ++ V ++ +P +P I + L D++ ++A+V V ++ L Sbjct: 298 TKQPGANVIETVGRIKAAMPRLRAAIPAAIHVNTLIDRTQTIRASVEDVEFTLVLTIALV 357 Query: 346 AAMVLLFLGNWRSTLIIGLTIPLSIMAAILMLAALGETLNLMTLGGLALSVGILVDQAIV 405 ++ +FL N +TLI +T+PL+IM ++ +G +L+ ++L L ++VG +VD AIV Sbjct: 358 VMVIFVFLRNVAATLIPSVTVPLAIMGTAGVMYVVGYSLDNLSLMALTIAVGFVVDDAIV 417 Query: 406 TIENIERHLHLGKPLHDAIIVGAGEIGVPAFVATLCICIVFVPMFFLSGVARFLFVPLAE 465 +ENI R++ G +A + GAGEIG ++ + VF+P+ + G+ LF A Sbjct: 418 MLENIYRYVEEGMTPLEAALKGAGEIGFTIISISVSLVAVFIPLLLMGGIVGRLFREFAV 477 Query: 466 AVVFAMAASYLLSRTLVPTLV-MLLMGSHGQVDSAKQSLLQRLYRAFDNRFERVRHGYTL 524 V +A S ++S TL P L L HGQ +LY+ F+ F+ + GY Sbjct: 478 TVTLTIAVSVIISLTLTPMLCSRFLKNEHGQRHG-------KLYQWFERCFDAMLAGYKR 530 Query: 525 VLSSLLAHRRRFALGFLGFCLLSCLLYPFLGRDFFPNVDGGQIRLHMRMPTGTRIEETAR 584 L ++ H+ + F+ L+ +L+ F+ + FFP D G I + ++T+ Sbjct: 531 GLDVVMKHQFITLMSFIATLALTAVLFIFIPKGFFPQQDNGVI-----VGFAESAQDTSS 585 Query: 585 AADEVERVIRSLIPASELETILDNLGVPNSGINLSYSNAGTIGTLDGEILMAL--KEGHR 642 AA ER+++ A + D +G S AG+ G+ +AL K+ R Sbjct: 586 AAMH-ERLLKV---AEVVRQDPDVIGFAMS--------AGSTTFNTGQFFIALKPKDQGR 633 Query: 643 PT--EELVSLLREQLPRRFPGIEFFFQPADIVTQILNFG---LPAAIDVQFTGPNMEANA 697 T +E+++ LR ++ R G+ F Q +Q +N G T +++ Sbjct: 634 TTNADEIIARLRPKVA-RIEGVNLFMQ----ASQDINVGGRLSRTQYQYTITDTDLDELN 688 Query: 698 RLAAELTKQIRQIPGAVDAHVHQRLDGPSLDLRMDRTRLQQFGLSAANVGQNLLIALSGS 757 A + ++ RQ+P D Q+ + + +DR R FG+S + + + A+ Sbjct: 689 VWAPRMLERFRQLPQLTDVASDQQNQAAAAVITIDRARASSFGISPSLIDATIYDAI--- 745 Query: 758 SQTQPAFWLNPNNGVVYSIAVQ-SPQYQVDS--LDAL-LNIPVGAGANAATPPQL-LGNL 812 Q Q A + N Y + ++ +P Q D D L L P+ T Q+ L Sbjct: 746 GQRQVAQYFTQINS--YRVILEVTPALQKDPALFDKLYLTSPL-------TGQQVPLSTF 796 Query: 813 VDVHAGRQMAVA-SRYNISPAIDVYVSV-QGTDLASVAGKVAKLVEEIKPKLARGSQVV- 869 V + + ++ S + PA+ + ++ +G L G+ ++++ K ++ +V Sbjct: 797 VKIDTSKTSYLSISHQSQFPAVTISFNLAKGVSL----GEAVDVIQKTKDQMGVPQTLVG 852 Query: 870 -IRGQVETMQSSFIGLGVGLAMAIVLVYLLVVVNFQSWIDAAIIIAALPAALAGIAWMLF 928 +G + S +A A++ VY+++ + ++S+I I++ LP+A G +L Sbjct: 853 NFQGTAKAFGDSLSSQPYLIAAALIAVYIVLGLLYESYIHPLTILSTLPSAGVGALLILM 912 Query: 929 LTGTTLSVPALTGAIMTMGVATANSILIVAFA-RQRREEGATPLASALEAGSTRIRPVLM 987 G LSV AL G I+ +G+ N I+++ FA R +G P + +A R RP++M Sbjct: 913 AGGYDLSVIALIGIILLIGIVKKNGIMMIDFALTAERSQGMKPEQAIYQACLLRFRPIMM 972 Query: 988 TALAMIIGMIPMALGLGEGAEQNAPLGRAVIGGLLLATVSTLFFVPVVFAGV---HQRLA 1044 T + ++ +P+ LG G G+E PLG A++GGL+L+ TLF PVV+ + H Sbjct: 973 TTMCALLSGLPLMLGHGAGSELRRPLGYAMVGGLILSQALTLFTTPVVYLYLDRAHYWYM 1032 Query: 1045 RRAERRR 1051 R+ E R+ Sbjct: 1033 RKKEARQ 1039 >gi|300310852|ref|YP_003774944.1| cation/multidrug efflux pump transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 1048 Score = 264 bits (674), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 268/1066 (25%), Positives = 487/1066 (45%), Gaps = 76/1066 (7%) Query: 10 RPYTFIVMALLIVLATPLTLKNMATDIFPEINIPVVSVIWNYNGLSAQEMGQRIAAQNER 69 RP ++ L I+L + + + PE++ P + V+ Y G S M + A ER Sbjct: 10 RPVATSLLMLAILLVGIVAYRLLPLSALPEVDYPTIQVVTLYPGASPDVMTSSVTAPLER 69 Query: 70 GLTTVVSDIEHIESQSLAGVAVIKVFFQPKANIQTAIAQVVASVQSQLRQLPPGI-TPPL 128 + ++ + S S G +VI + F ++ A +V A++ + LP + PP+ Sbjct: 70 QFGQM-PGLKQMSSTSSGGASVITLQFNLDLSLDIAEQEVQAAINAGSNLLPSDLPMPPV 128 Query: 129 VIKYSASSIPVMQLALSSPTLPEQTVFDTAVQTLRPQLITIPGVAVPFPYGGKTRLISVD 188 K + + P++ LA++S T+P V D + ++ + GV + GG+ + + Sbjct: 129 YSKVNPADTPIITLAVTSNTMPLPKVQDLIDTRIAQKISQLSGVGLVSLSGGQRPAVRMQ 188 Query: 189 LDTPALQSRGLSPIDVVNAINTQNLILPSGTAKFGGTEYSVKLNGSPEAVAGLNELPVRT 248 L+ A+ + GL+ DV AI N+ G+ ++ N + L + Sbjct: 189 LNPRAVAALGLNLDDVRTAIGNANVNQAKGSFDGPTRASTIDANDQLRSADEYRNLIIAY 248 Query: 249 ANGATIYLKDVANVRDGFSPQTNVVRQDGARGVLLSILKNGGASTLDIVDNLRKLLPTAA 308 NGA I + DVA+V DG + V+++I + GA+ + +VD+++K+LP Sbjct: 249 KNGAPIRVSDVADVVDGAENVRLGAWANTQPAVIVNIQRQPGANVIAVVDSIKKILPQLQ 308 Query: 309 QTLPEDIKITPLFDQSLFVKAAVTGVISEALIAAGLTAAMVLLFLGNWRSTLIIGLTIPL 368 +LP I + L D++ ++A+V V E L++ L ++ +FL N +T+I + +PL Sbjct: 309 ASLPGAIDVHILTDRTTTIRASVDDVKFELLLSVALVVMVIFVFLRNVPATIIPSVAVPL 368 Query: 369 SIMAAILMLAALGETLNLMTLGGLALSVGILVDQAIVTIENIERHLHLGKPLHDAIIVGA 428 S++ ++ G ++N +TL L ++ G +VD AIV IENI R++ G A + GA Sbjct: 369 SLVGTFAIMYLAGFSINNLTLMALTIATGFVVDDAIVMIENISRYIEEGMKPMQAALKGA 428 Query: 429 GEIGVPAFVATLCICIVFVPMFFLSGVARFLFVPLAEAVVFAMAASYLLSRTLVPTLVML 488 +IG T + V +P+ F+ V LF A + ++ S ++S TL P + Sbjct: 429 EQIGFTIISLTFSLIAVLIPLLFMGDVVGRLFHEFAVTLAVSILISAVVSLTLTPMMCAR 488 Query: 489 LMGSHGQVDSAKQSLLQRLYRAFDNRFERVRHGYTLVLSSLLAHRRRFALGFLGFCLLSC 548 L+ + Y F+R+ Y ++L +LA ++ L L+ Sbjct: 489 LLRHQPEEQQG------WFYHKSQQFFDRIIARYGVMLQWVLARQKLTLLVAAATLGLTV 542 Query: 549 LLYPFLGRDFFPNVDGGQIRLHMRMPTGTRIEETARAADEVERVIRSLIPASELETILDN 608 LLY F+ + FFP D G I+ + T+ + ++ +++ + ++ +E++ Sbjct: 543 LLYVFVPKGFFPLQDTGVIQ---GISEATQSISFSAMGEKQQQLAKVVLQDPAVESLTSF 599 Query: 609 LGVPNSGINLSYSNAGTIGTLD-GEILMALKEGHRPTE----ELVSLLREQLPRRFPGIE 663 +GV GT TL+ G +L+ LK H E +++ L+ +L PGI Sbjct: 600 IGVD-----------GTNATLNSGRMLINLKP-HDVREVSATDVIRRLQGKLAAEVPGIT 647 Query: 664 FFFQPADIVTQILNFGLPAAIDVQFTGPNMEAN--ARLAAELTKQIRQIPGAVDAHVHQR 721 + QP +T + + QFT + + + +L +++Q D + + Sbjct: 648 LYMQPVQDLTIEDSV---SRTQYQFTLEDADPAVLSTWVPKLIARLQQQSELADVATNLQ 704 Query: 722 LDGPSLDLRMDRTRLQQFGLSAANVGQNLLIALSGSSQTQPAFWLNPNNGVVYSIAVQSP 781 G + +DR + G++ A + L A ++ +I QS Sbjct: 705 DQGLQAYIEIDRNAASRLGITTAAIDNALYNAF--------------GQRLISTIYTQSN 750 Query: 782 QYQV------------DSLDALLNIPVGAG----ANAATPPQLLGNLVDVHAGRQMAVAS 825 QY+V +LD++ + G G ++ AT + LV H G+ A Sbjct: 751 QYRVVMEVKPEFQHGPAALDSIYLVTSGGGKVPLSSIATVTERTAPLVVNHIGQFPAATV 810 Query: 826 RYNISPAIDVYVSVQGTDLASVAGKVAKLVEEIKPKLARGSQVVIRGQVETMQSSFIGLG 885 +N++ +G L + EEI + + +G Q+S Sbjct: 811 SFNLA---------KGASLGEAVKAIKAAEEEI--GMPASTVTNFQGAALAFQASLSNTL 859 Query: 886 VGLAMAIVLVYLLVVVNFQSWIDAAIIIAALPAALAGIAWMLFLTGTTLSVPALTGAIMT 945 + AIV +Y+++ V ++S+I I++ LP+A G L ++GT L + + G I+ Sbjct: 860 WLILAAIVTMYIVLGVLYESYIHPITILSTLPSAGVGALLSLMISGTDLGIIGIIGIILL 919 Query: 946 MGVATANSILIVAFARQ-RREEGATPLASALEAGSTRIRPVLMTALAMIIGMIPMALGLG 1004 +G+ N+I+++ FA + R EG +P + +A R RP+LMT +A ++G +P+ LG G Sbjct: 920 IGIVKKNAIMMIDFALEAERHEGKSPREAIYQACLLRFRPILMTTMAALLGALPLMLGTG 979 Query: 1005 EGAEQNAPLGRAVIGGLLLATVSTLFFVPVVFAGVHQRLARRAERR 1050 G+E PLG ++GGLL++ V TLF PV++ G L RR R Sbjct: 980 VGSELRQPLGITMVGGLLVSQVLTLFTTPVIYLG-FDSLGRRLRAR 1024 >gi|300309819|ref|YP_003773911.1| acriflavin resistance transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 1048 Score = 242 bits (618), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 277/1074 (25%), Positives = 470/1074 (43%), Gaps = 71/1074 (6%) Query: 8 LRRPYTFIVMALLIVLATPLTLKNMATDIFPEINIPVVSVIWNYNGLSAQEMGQRIAAQN 67 + RP V+A+ I+LA L + + +P I P + V Y G +AQ + + + Sbjct: 6 IDRPVFAWVLAIFIMLAGALAITGLPVSQYPNIAPPTIVVTATYPGATAQTLDDSVTSLI 65 Query: 68 ERGLTTVVSDIEHIESQSLA-GVAVIKVFFQPKANIQTAIAQVVASVQSQLRQLPPGITP 126 E+ + +++IESQS A G I + F P+ N A V ++ +LP +T Sbjct: 66 EQEMNGA-DGLQYIESQSQANGQVQITITFSPETNPDLAAVDVQNRLKRVEARLPAAVTQ 124 Query: 127 PLVIKYSASSIPVMQLALSSP--TLPEQTVFDTAVQTLRPQLITIPGVAVPFPYGGKTRL 184 V + S ++ + LSS L + D + + ++ +PGV +G + R Sbjct: 125 QGVQVTKSRSNFLLFIGLSSTDGKLDPVALGDYLSRNVLNEIKRVPGVGQAQLFGTE-RA 183 Query: 185 ISVDLDTPALQSRGLSPIDVVNAINTQNLILPSGTAKFG-----GTEY---SVKLNG--- 233 + + +D L L+P DV AI QN ++ GT G GT+ +V +NG Sbjct: 184 MRIWIDPNKLIGLNLTPADVTAAIQAQNALVAGGT--LGALPSPGTQQIAATVVVNGQLT 241 Query: 234 SPEAVAGLNELPVRTANGATIYLKDVANVRDGFSPQTNVVRQDGARGVLLSILKNGGAST 293 SPE N + ANGAT+ L+DVA V G R DG + + + A+ Sbjct: 242 SPEQFG--NIILRANANGATVRLRDVARVEVGGQSYDTSGRLDGKPSSFIGVQLSPTANA 299 Query: 294 LDIVDNLRKLLPTAAQTLPEDIKITPLFDQSLFVKAAVTGVISEALIAAGLTAAMVLLFL 353 L + K + A+ P +K T +D S FVK ++ V+ + A L ++ LFL Sbjct: 300 LGTATAVHKKMEELAKYFPTGVKYTIPYDTSKFVKISIEEVVKTLIEAIVLVFLVMFLFL 359 Query: 354 GNWRSTLIIGLTIPLSIMAAILMLAALGETLNLMTLGGLALSVGILVDQAIVTIENIERH 413 N R T+I + +P++++ L G ++N++T+ G+ L++GILVD AIV +EN+ER Sbjct: 360 QNIRYTIIPTIVVPVALLGTFATLLLFGFSINVLTMFGMVLAIGILVDDAIVVVENVERI 419 Query: 414 L-HLGKPLHDAIIVGAGEIGVPAFVATLCICIVFVPMFFLSGVARFLFVPLAEAVVFAMA 472 + G DA G+I TL + VF+PM F G ++ + ++V +M Sbjct: 420 MSEEGLSPADATRKAMGQISGALIGITLVLIAVFIPMAFFGGAVGAIYRQFSLSMVASMV 479 Query: 473 ASYLLSRTLVPTLVMLLMGSHGQVDSAKQSLLQRLYRAFDNRFERVRHGYTLVLSSLLAH 532 S L++ TL P L ++ V+ + + F+ +F GY ++ +L Sbjct: 480 FSVLMAFTLTPALCATILKP---VEKGHHHEKKGFFGWFNRKFNSTASGYQGIIGGMLNK 536 Query: 533 RRRFALGFLGFCLLSCLLYPFLGRDFFPNVDGGQIRLHMRMPTGTRIEETARAADEVERV 592 R+ + ++ LLY L F PN D G I ++++P G T ++E Sbjct: 537 AGRYMIVYVLIVACVGLLYVRLPASFLPNEDQGYIITNVQLPPGASTSRTTAVVKQIE-- 594 Query: 593 IRSLIPASELETILDNLGVPNSGINLSYSNAGTIGTLDGEILMALKEGHRPTEELVSLLR 652 E L + V ++ L YS +G G + LK+ + + Sbjct: 595 ----------EYYLKDPAVEHAIAVLGYSFSGN-GQNAALVFTPLKDWSQRD-------K 636 Query: 653 EQLPRRFPGIEF--FFQPADIVTQILN-FGLPAAIDVQFTGPNMEANARLAAELTKQIR- 708 Q G F F Q D + LN +P + ++ A L Q R Sbjct: 637 SQSADAIAGKAFGAFSQIKDAIVFPLNPPPIPELGNATGFTFRLQDRAGLGHTALVQARN 696 Query: 709 QIPG-AVDAHVHQ--RLDG----PSLDLRMDRTRLQQFGLSAANVGQNLLIALSGSSQTQ 761 QI G A + V R +G P L L +DR + G+ + + L AL S Sbjct: 697 QILGMASQSKVLAGVRPEGLEDAPQLQLDIDRDKANALGVPFSTINSVLSTALGSS---- 752 Query: 762 PAFWLN--PNNGVVYSIAVQSPQYQVDSLDALLNIPVGAGANAATPPQLLGNLVDVHAGR 819 ++N PN G + VQ+ + + L N+ + P ++ Sbjct: 753 ---YVNDFPNLGRQQRVIVQADAKRRLQPEDLTNLYARNSSGTMVPFSAFVTAKWINGPV 809 Query: 820 QMAVASRYNISPAIDVYVSVQGTDLASVAGKVAKLVEEIKPKLARGSQVVIRGQVETMQS 879 Q+ RYN PA+ + G G+ +E KL G GQ ++ Sbjct: 810 QLI---RYNGYPAMKI---AGGAAPGRSTGEAMAEMESFVAKLPPGFGFEWTGQSLEEKT 863 Query: 880 SFIGLGVGLAMAIVLVYLLVVVNFQSWIDAAIIIAALPAALAGIAWMLFLTGTTLSVPAL 939 S A++++ V+L++ ++S ++ +P + G + L V Sbjct: 864 SGNQAPALYALSLIAVFLVLAALYESTSIPLAVMLVVPLGILGALLGVTLRAMPNDVYFK 923 Query: 940 TGAIMTMGVATANSILIVAFARQRREEGATPLASALEAGSTRIRPVLMTALAMIIGMIPM 999 G I +G++ N+ILI+ FA+ + +G + + LEA R RP++MT+LA I+G++P+ Sbjct: 924 VGMIAVVGLSAKNAILIIEFAKDLQAQGKGLIEATLEAVHLRFRPIIMTSLAFILGVLPL 983 Query: 1000 ALGLGEGAEQNAPLGRAVIGGLLLATVSTLFFVPVVFAGVHQRLARRAERRRHL 1053 A+ G G+ +G V+GG++ ATV +F VP+ F V +++ + +ER+R Sbjct: 984 AIASGAGSASQRAIGTGVMGGMITATVLAVFLVPIFFV-VVRKIFKGSERQRKF 1036 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.322 0.137 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 3,072,943 Number of extensions: 131424 Number of successful extensions: 639 Number of sequences better than 1.0e-08: 11 Number of HSP's gapped: 570 Number of HSP's successfully gapped: 18 Length of query: 1062 Length of database: 1,619,870 Length adjustment: 95 Effective length of query: 967 Effective length of database: 1,170,045 Effective search space: 1131433515 Effective search space used: 1131433515 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 136 (57.0 bits)