BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0067.p (779 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310274|ref|YP_003774366.1| VGR-related protein [Herbaspiri... 182 7e-47 gi|300312702|ref|YP_003776794.1| VGR-related protein [Herbaspiri... 157 3e-39 gi|300313606|ref|YP_003777698.1| VGR-related type VI secretion s... 142 8e-35 gi|300309592|ref|YP_003773684.1| VGR-related protein [Herbaspiri... 133 6e-32 gi|300309366|ref|YP_003773458.1| VGR-related protein [Herbaspiri... 114 2e-26 >gi|300310274|ref|YP_003774366.1| VGR-related protein [Herbaspirillum seropedicae SmR1] Length = 928 Score = 182 bits (463), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 219/849 (25%), Positives = 351/849 (41%), Gaps = 159/849 (18%) Query: 12 LKLAPHPAPTSVL--RFNGRDAISELYRYDVEFTSSVNDIPMDQVVGRPAKFIISPVDPN 69 LKL P +L R G + + Y Y ++ S+ +DI + +++ +P Sbjct: 35 LKLDSVLGPDVLLPQRMVGSERLGRGYDYTIDLVSTRDDIELKKLIAQPVTL-------- 86 Query: 70 MDYLRRMFGDNAEQFSKMPAAYTIHGIVTEFDELSSSADQTHYRIRLEPTLADLNRGVTS 129 +L++ D A +HG V L S ++I + P L L + Sbjct: 87 --WLQQDGSDYA----------PLHGYVHTARRLGSDGQLASFQIGMAPWLHFLKYRKDA 134 Query: 130 RLFQKQSVEEIITDTLRHYGYRAGVDFQFKLRGQYKRREYITQYHETTFAFIQRICAEEG 189 R++Q ++I+ D + Y G +++F++ R Y TQY ET + F+QR+ EEG Sbjct: 135 RIWQDSKADDILADVFDQHAYARG-NYRFEIVTPALPRSYCTQY-ETDWHFVQRLMEEEG 192 Query: 190 IWFRWEQKKDHA--VVVFGDDLD---AYARKQ-------------RIVSYRRDAGLESSG 231 + EQK D + V+V D+ D A +Q RI+ + GL S+ Sbjct: 193 WYAYHEQKPDGSGHVLVITDNTDQAKPLAPEQLAFHGAGTQDEVNRILHWSASRGLASTR 252 Query: 232 IDAIKTLEKRTKRVPEAVRLHDY----NHRQAGVSLLVEQSAARDDKTTSGVDYRWGEHY 287 + A R DY + +Q +L E A + +Y Y Sbjct: 253 L---------------ATRTDDYKSPGDQKQTQERVLPEHGALPGELEV--YEYSGPYSY 295 Query: 288 ETPEEGQRTAQLRHEEFLSRQISFKGTGNPFWLEAGEVMRLDTNPS-------DAQHGIF 340 ++G R A+LR E++ S F G L AG L +P+ D+Q Sbjct: 296 AKQDDGDRQARLRVEQWESSMKRFMGVSGARTLAAGRWFTLTDHPAHRGDSKQDSQ--FM 353 Query: 341 ITAVESEGGRGQAFWLSFEGIPSDRVWRTSVHSIVRPVIDGI------------------ 382 + AVE W +P R S+ +P +D Sbjct: 354 LIAVE---------WFIENNLPLSGTARDFPGSL-KPQLDAFKASMGRSNDDAGGNARTG 403 Query: 383 ------------LPARITSPGDYKYAYLNEQGWYVI---------------KLPFDLDEW 415 LP R SP D+ ++ Q V+ K+ F D Sbjct: 404 HCFNRFEVQRRKLPYR--SPFDHTKPVMHPQTAVVVGPQGEEVFTDKLNRVKVQFRWDRI 461 Query: 416 SPGG--SSRPVRFAKPYSGDDYGH-HFPLIDGAEVAIIHTAGDPDRPVIIGALHDSLHPD 472 +PG +S VR + P +G+++G P + G E+ I GDPDRPV G L + P Sbjct: 462 NPGDEKASCWVRVSYPNAGENWGEVKVPRV-GQELIISFLNGDPDRPVATGRLFNQEQPP 520 Query: 473 LVTSHNNTRNIVRTAAQ------NELRMEDKEGVEHIHLTTPFQTSELNLGHLVDADRAE 526 H + R + + N+L M+D +HL + ++LNLG+LV E Sbjct: 521 --QWHTDGRLSGLKSKEFGGNGFNQLVMDDTTSQNRVHLYSSQSNAQLNLGYLVSQADNE 578 Query: 527 R----GRGAELRTDGHAVVRGAKGVLVSAEEQAGAAVRQLAMQGAEMTFEQAEQIMQTLN 582 R G G L TD + V KG+ +S+ + G QL A + + + + L+ Sbjct: 579 RRNFYGSGFALSTDDYGAVVTQKGLYLSSYGRPGPQGTQLDASEATSLMKASADLARGLS 638 Query: 583 ESTKTANA---AQGDI--------DQQRTLLQQRIRDLQKPVFVATAPEGVGLASGMQMQ 631 +S A A AQ + D+ Q +KP+ + AP G+GLA+ Q Sbjct: 639 DSASRAGAEALAQDSLKDFVDATEDKYSGQGQGSANRFKKPLLMMAAPAGIGLATDQGTQ 698 Query: 632 FSARKQMILTAGNGLDVGVMKRIAMAAGEAISLFAEKLGIRIFAAKGKVQLQAQSDAMEL 691 + ++ LT+G + K + E ISLFA+ G+++FAAKGKV++QAQSD ++L Sbjct: 699 VHSAQETTLTSGKDTSIASGKSLLATVKEKISLFAQNAGMKLFAAKGKVEIQAQSDDLDL 758 Query: 692 MAMHDMTISSSEGEVIIAGRKCVTIGDGAGAYIKLSGGKITLGSASGEIELKGNL-KIDG 750 +A + S+ G V I + V I G G++I+++ IT G+ G+ E K +L + G Sbjct: 759 IAEKVARLLSTSGRVEIHAKDEVMISAG-GSFIQINSAGITQGTP-GKWEAKASLHSMPG 816 Query: 751 PDGGSFKFP 759 P +F P Sbjct: 817 PASQNFVMP 825 >gi|300312702|ref|YP_003776794.1| VGR-related protein [Herbaspirillum seropedicae SmR1] Length = 824 Score = 157 bits (397), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 192/804 (23%), Positives = 329/804 (40%), Gaps = 106/804 (13%) Query: 23 VLRFNGRDAISELYRYDVEFTSSVNDIPMDQVVGRPAKFIISPVDPNMDYLRRMFGDNAE 82 + R +A+S Y Y +E S IP+D ++G+ + ++ D + Sbjct: 37 INRLEASEALSRDYVYTLELLSDDAHIPLDAMMGKLLRVALTRADGTQRHFT-------- 88 Query: 83 QFSKMPAAYTIHGIVTEFDELSSSADQTHYRIRLEPTLADLNRGVTSRLFQKQSVEEIIT 142 G V F L S Y RL P LA L +R+F S+E + Sbjct: 89 ------------GYVERFAFLRSDGGIAFYEARLVPWLAFLASRHNNRIFHHLSLEGLSA 136 Query: 143 DTLRHYGYRAGVDFQFKLRGQYKRREYITQYHETTFAFIQRICAEEGIWFRWEQKKDHAV 202 R Y A D Q LR R + Q+ E+ + R + G + +E + D Sbjct: 137 AIFRAYPMHARWDCQ--LRHGDPVRTEMFQFDESDSNLLHRRWEDAGWHYHYEHQADGHQ 194 Query: 203 VVFGDDLDAYARK---QRIVSYRRDAG-LESSGI---DAIKTLEKRTKRVPEAVRLHDYN 255 + DD YA+ V ++R G +E G+ A++ + P + RL Y+ Sbjct: 195 LRLSDD-STYAKPIDGTGQVPFQRHGGAIEEDGMAQWSAVRQFQ------PSSTRLSSYD 247 Query: 256 HRQA-----GVSLLVEQSAARDDKTTSGVDYRWGEHYETPEEGQRTAQLRHEEFLSRQIS 310 + A V L +Q A +Y + ++G R ++LR EEF + Sbjct: 248 FKAARPQEVEVPTLNKQGAVLQ---VEHYEYAGAYGFANRDDGDRQSRLRMEEFEAAAQV 304 Query: 311 FKGTGNPFWLEAGEVMRLD--------TNPSDAQHGIFITAVESEGGRGQAFWLSFEGIP 362 F+GTGN +L+ G RL ++ D + I +VE +L P Sbjct: 305 FEGTGNCRFLQPGRTFRLTGHFSGSAASHDHDRDPELLIISVEHSATNN---YLQDSETP 361 Query: 363 ---SDRV--------WRTSVHSIVRPV-IDGILPARITSPGDYKYAYLNEQGWYVIKLPF 410 ++RV WR +P + GI A + P +++E G ++ + Sbjct: 362 PFYANRVRCVRKRIPWRPGRSYYSQPTALLGIQTATVVGPAGENL-HVDEYGRVKVQFHW 420 Query: 411 DLDEWSPGGSSRPVRFAKPYSGDDYGH-HFPLIDGAEVAIIHTAGDPDRPVIIGALHDSL 469 D + SS +R A +SG + G P I G V + G PDRP+I G++ + L Sbjct: 421 DQIGRNDERSSAWLRVASSWSGGEQGLVSVPRI-GQLVIVQWLGGHPDRPIITGSVVNQL 479 Query: 470 H-PDLVTSHNNTRNIVRT------------AAQNELRMEDKEGVEHIHLTTPFQTSELNL 516 + P + + +R+ + +D + + S+L L Sbjct: 480 NMPPWTLPSQSALSGMRSRELAPRTGNAPGGRSGHVLFDDTHEAIQTQVRSDAFDSQLAL 539 Query: 517 GHLVDADRAE-----RGRGAELRTDGHAVVRGAKGVLVSAEEQAGAAVRQLAMQGAEMTF 571 GH+ +R RG G ELRTD H VVR A+G+L+++E + A + Sbjct: 540 GHITRIERHAGRQDARGEGFELRTDAHGVVRAAQGLLLTSEPRPKAHRHTTDIGETVARL 599 Query: 572 EQAEQIMQTLNESTKTANAAQGDIDQ----QRTLLQQ------------RIRDLQKPVFV 615 QA +++L++ + A + DQ Q Q R +L +P V Sbjct: 600 TQARGTVESLSKLAQEHEAQDKNADQYDAAQAIKAQNDAIKGDGAAKGGRFPELTEPHLV 659 Query: 616 ATAPEGVGLASGMQMQFSARKQMILTAGNGLDVGVMKRIAMAAGEAISLFAEKLGIRIFA 675 ++P G+ +SG ++ + LTAG+ + + K +A E +SL A +LG ++ A Sbjct: 660 LSSPSGIEASSGASTHLASAEHAALTAGSHISLAAGKSFFASAAEKLSLLAYRLGAKLIA 719 Query: 676 AKGKVQLQAQSDAMELMAMHDMTISSSEGEVIIAGRKCVTIGDGAGAYIKLSGGKITLGS 735 A G+V++QAQ+D MEL+A + I S+ + + +K + + +G G+ + ++ G Sbjct: 720 ASGRVEIQAQNDGMELLAQKVVDIISTRDWINLKAKKGIRL-NGGGSELVIAEGITGFTQ 778 Query: 736 ASGEIELKGNLKIDGPDGGSFKFP 759 + + + + GP G +FP Sbjct: 779 GAHHVHAADHQTL-GPQGRPAEFP 801 >gi|300313606|ref|YP_003777698.1| VGR-related type VI secretion system protein [Herbaspirillum seropedicae SmR1] Length = 886 Score = 142 bits (359), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 119/374 (31%), Positives = 184/374 (49%), Gaps = 35/374 (9%) Query: 406 IKLPFDLDEWSPG--GSSRPVRFAKPYSGDDYGH-HFPLIDGAEVAIIHTAGDPDRPVII 462 IK+ F D +PG +S VR + P +G +G P I G EV + GDPDRPV+ Sbjct: 441 IKVQFRWDRINPGNEAASCWVRVSYPNAGQYWGAIQVPRI-GQEVIVSFLNGDPDRPVVT 499 Query: 463 GALHDS-----LHPDLVTSHNNTRNIVRTAAQNELRMEDKEGVEHIHLTTPFQTSELNLG 517 G L ++ H + S ++ T N++ M+D IHL + ++LNLG Sbjct: 500 GRLFNAEQRPQWHTNGRLSGVKSKEFGGTGF-NQMVMDDTPEQNRIHLYSTNTHAQLNLG 558 Query: 518 HLVDADRAER----GRGAELRTDGHAVVRGAKGVLVSAEEQAGAAVRQLAMQGAEMTFEQ 573 HLV ER G G L TD + + KG+ +S + GA QL + A + Sbjct: 559 HLVSQTGNERRSFFGSGFALSTDAYGAIVTHKGLYISTYGRPGAQGTQLDAREATGQLKS 618 Query: 574 AEQIMQTLNESTKTA---------------NAAQGDIDQQRTLLQQRIRDLQKPVFVATA 618 + +TL+E+ A +A Q D + Q + Q+ + +A + Sbjct: 619 GANLSRTLSETAAKAGAEPLAGQEALRDFIDATQADYEDPS---QAQANRFQQAILLAAS 675 Query: 619 PEGVGLASGMQMQFSARKQMILTAGNGLDVGVMKRIAMAAGEAISLFAEKLGIRIFAAKG 678 P+G+GL + + A ++ L++G + V K + + E ISLFA K GI++F+AKG Sbjct: 676 PDGIGLTTPKGVHTHAGGEITLSSGADTSIAVGKSLLASVAEKISLFAFKAGIKLFSAKG 735 Query: 679 KVQLQAQSDAMELMAMHDMTISSSEGEVIIAGRKCVTIGDGAGAYIKLSGGKITLGSASG 738 KV++QAQSD +EL+A + S+ G V I ++ V I G G++I+L+ IT G+ SG Sbjct: 736 KVEVQAQSDDLELIAEKVARLLSASGRVEIRAKEEVLITAG-GSFIRLNASGITQGT-SG 793 Query: 739 EIELK-GNLKIDGP 751 E K G + GP Sbjct: 794 AWEAKAGTHAMPGP 807 Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 65/315 (20%), Positives = 129/315 (40%), Gaps = 31/315 (9%) Query: 25 RFNGRDAISELYRYDVEFTSSVNDIPMDQVVGRPAKFIISPVDPNMDYLRRMFGDNAEQF 84 R + +++ Y ++ ++ I ++Q++ +P ++R+ GD Sbjct: 38 RLVATERLNDGYEVTIDLLATHTGIALEQLIAQPVTL----------WIRQHDGDT---- 83 Query: 85 SKMPAAYTIHGIVTEFDELSSSADQTHYRIRLEPTLADLNRGVTSRLFQKQSVEEIITDT 144 +P +HG V L S + ++ L P L L +R++Q + E+I+ D Sbjct: 84 --LP----LHGYVHTAKRLGSDGELDFCQLSLSPWLHFLRFRKDARIWQDKRTEDILADV 137 Query: 145 LRHYGYRAGVDFQFKLRGQYKRREYITQYHETTFAFIQRICAEEGIWFRWEQKKD---HA 201 ++ G ++F+L Y R Y TQY ET + F+QR+ EEG + EQ++D H Sbjct: 138 FNNHPQARG-HYRFQLERPYTPRPYCTQY-ETDWHFVQRLMEEEGWFAHHEQREDGSGHV 195 Query: 202 VVVFGDDLDAYARKQRIVSYRRDAGLESSGIDAIKTLEKRTKRVPEAVRLHDYNHRQAGV 261 +V+ + + Q+ +++ A + +D I + R +++ G+ Sbjct: 196 LVITDNTWNLPGLPQQGIAFHGAAPRDE--LDKILHWSASRTLSSKGWRGRSDDYKSPGM 253 Query: 262 SLLVEQSAARD----DKTTSGVDYRWGEHYETPEEGQRTAQLRHEEFLSRQISFKGTGNP 317 E+ + +Y + E+G R A L+ E++ S + Sbjct: 254 KKEAEEQVMPEYGQLPAQLEMYEYTGAYSFRLQEQGNRQADLQVEQWESSMQRYSAVSGV 313 Query: 318 FWLEAGEVMRLDTNP 332 L G RL+ +P Sbjct: 314 RNLACGRWFRLEEHP 328 >gi|300309592|ref|YP_003773684.1| VGR-related protein [Herbaspirillum seropedicae SmR1] Length = 966 Score = 133 bits (334), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 194/807 (24%), Positives = 321/807 (39%), Gaps = 133/807 (16%) Query: 48 DIPMDQVVGRPAKFIISPVDPNMDYLRRMFGD--NAEQFSKMPAAYTIHGIVTEFDELSS 105 DI + G + DP++ L + G E + + +G++T D + Sbjct: 45 DIQETLLEGMQVQLTCVSTDPDLP-LHTLLGQPLGVEMVTDRGRLHHTNGLIT--DACAG 101 Query: 106 SADQTH--YRIRLEPTLADLNRGVTSRLFQKQSVEEIITDTLRHYGYRA---GVDFQFKL 160 AD Y++ + L+ + V +R+F++ SV I+ L + R+ F+F L Sbjct: 102 HADGALRVYQLTMRDALSIMEGRVNTRIFRRLSVPSILEILLSEWRQRSSTLAAAFKFDL 161 Query: 161 RG----QYKRREYITQYHETTFAFIQRICAEEGI-WF--RWEQKKDHAV----------V 203 G +Y RE Q++E+ FI+R+C EGI W+ +Q + A+ + Sbjct: 162 DGLDDTRYPAREISHQFNESDAHFIRRLCRREGIAWYVASGQQADETAIATHADIPIHTL 221 Query: 204 VFGDDLDAYARKQR-IVSYRRDAGLESSGIDAIKTLEKRTKRVPEAVRLHDYNHRQAGVS 262 VF D R V Y RD E DAI ++ VP +V ++++ + Sbjct: 222 VFCDQPALLPRAAAGTVRYHRDGATEER--DAISAWSRQRSLVPGSVWRRSWDYK----A 275 Query: 263 LLVEQSAARDDKTTSGVDYRWGE-----HYETPEEGQ------RTAQLRHEEFLSRQISF 311 + E++++ Y+ E P R A R +R SF Sbjct: 276 VRAEEASSHSIVDQGDAGYKLANILRDGLIEAPHAADSQNDHLRLADTRMLAHEARSESF 335 Query: 312 KGTGNPFWLEAGEVMRLDTNP-----SDAQHGIFITAVESEGGRGQAFWLSFEGIPSDRV 366 +G L G LD +P AQ +T+++ + +F + D + Sbjct: 336 DASGTVRDLAVGHWFLLDGHPDMRGQKPAQREFLVTSLQQQAEN------NFPTVLQDAI 389 Query: 367 --------WRTSVHSIVRPVIDGILPARI-TSPGDYKY---------------------- 395 W+ HS L R T+P Y Sbjct: 390 RRLAPASPWKNLAHSAADLRYRNQLTCRRRTAPLAPHYDPRLHLPPVHPITALVVGPSKE 449 Query: 396 -AYLNEQGWYVIKL----PFDLDEWSPGGSSRP------VRFAKPYSGDDYGHHFPLIDG 444 Y +E G ++L P D G+S VR + ++G YGH G Sbjct: 450 EVYCDELGRIKVQLQGLHPEDHAHAQGAGASGHEQDSAFVRVSSAWAGAGYGHDAVPRVG 509 Query: 445 AEVAIIHTAGDPDRPVIIGALHDSLHPDLVTSH------NNTRNIVRT-----AAQNELR 493 EV I GDPD+ + G LH+ ++ SH N + ++T A N+LR Sbjct: 510 MEVLIDFLGGDPDKMFVAGVLHNGINLPARFSHSGSLPGNRFLSGIKTKEIGGARYNQLR 569 Query: 494 MEDKEGVEHIHLTTPFQTSELNLGHLVDADRAERGRGA----ELRTDGHAVVRGAKGVLV 549 ++D G L + Q S+LNLG+L + RG E RTDGH V+R AKGV++ Sbjct: 570 LDDSPGQISTQLASEHQHSQLNLGYLTEPRHGGRGEDRGEGLEARTDGHGVMRAAKGVMI 629 Query: 550 SAEEQAGAAVRQLAMQGAEMTFEQAEQIMQTLNESTKTANAAQGDIDQ-QRTLLQQRIRD 608 +A+ Q R L T + +++ Q L+ +A D+ Q +R Q R D Sbjct: 630 TAQSQDRGRGRMLERAALLETLDNLQELAQRLSHDAARHHAEATDVAQLERIRAQLRAWD 689 Query: 609 ----------LQKPVFVATAPEGVGLASGMQMQFSARKQMILTAGNGLDVGVMKRIAMAA 658 + P+ AP GV + S M A + + L + + +R+ M A Sbjct: 690 AGDVANGAVRAETPMVAVDAPAGVSITSQDTMVLGAAQHIDLVSRANTQLSAGRRLLMRA 749 Query: 659 GEAISLFAEKLGIRIFAAKGKVQLQAQSDAMELMAMHDMTISSSEGEVIIAGRKC----- 713 GE +S FA K +++ + KG +++QA + ++L A + + +SE E+I+ K Sbjct: 750 GEMLSAFAAK-HMKLISGKGSIKIQAHEEHIDLSAARRILLEASE-EIILQAPKISIRSR 807 Query: 714 -VTIGDGAGAYIKLSGGKITLGSASGE 739 T G G++ + + I G+ SGE Sbjct: 808 ETTEVAGGGSFSRWNASAIEHGT-SGE 833 >gi|300309366|ref|YP_003773458.1| VGR-related protein [Herbaspirillum seropedicae SmR1] Length = 913 Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 104/358 (29%), Positives = 169/358 (47%), Gaps = 33/358 (9%) Query: 424 VRFAKPYSGDDYGH-HFPLIDGAEVAIIHTAGDPDRPVIIGALHD--SLHPDL--VTSHN 478 VR A ++G +G P + G EV + GDPD+P+++G +++ SL P V S Sbjct: 487 VRVASHWAGRQWGAISLPRV-GDEVLVDFLGGDPDKPIVVGRVYNGQSLPPAFSRVGSLP 545 Query: 479 NTRNIVRTAAQ-------NELRMEDKEGVEHIHLTTPFQTSELNLGHLVD---ADRAE-R 527 R + ++ N+LR++D L + SELNLG L R++ R Sbjct: 546 GNRFLAGIKSKEIQGQRYNQLRLDDTPQQISAQLASQHGQSELNLGWLTHPRAGGRSDAR 605 Query: 528 GRGAELRTDGHAVVRGAKGVLVSA---EEQAGAAVRQLAMQGAEMTFEQAEQIMQTLNES 584 G GAELRTD +RG +GVL+SA +E +G + + M G + +Q + TL ++ Sbjct: 606 GEGAELRTDQALALRGGQGVLISAVMRQEASGTQLDRAEMLGLLHVLQDVQQQLATLAQT 665 Query: 585 TKTANAAQGDIDQQRTLL---------QQRIRDLQKPVFVATAPEGVGLASGMQMQFSAR 635 + + R L Q + KP+ TAP GV + S + A+ Sbjct: 666 HHADDTQLQTFSRLRDQLDAWEAGSNTQAKSDGGGKPMVAVTAPAGVAITSDEGVALGAQ 725 Query: 636 KQMILTAGNGLDVGVMKRIAMAAGEAISLFAEKLGIRIFAAKGKVQLQAQSDAMELMAMH 695 K++ L + K++ E+I LFA++LGI++ AA GK+QLQ +E+ + Sbjct: 726 KEIDLISVGNTQFSAGKKLLARVAESICLFAQRLGIQLVAANGKLQLQTHGGDVEVTSAR 785 Query: 696 DMTISSSEGEVIIAGRKCVTIGDGAGAYIKLSGGKITLGSASGEIELKGNL-KIDGPD 752 + +++++ V+ A R + GA I L GG IT S+ + GN + G D Sbjct: 786 RIVLTAADEIVLQAPRLRL---QAQGAQIDLGGGVITQQSSGDHVIRSGNFHHVSGAD 840 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.318 0.134 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,528,300 Number of extensions: 114114 Number of successful extensions: 385 Number of sequences better than 1.0e-08: 9 Number of HSP's gapped: 351 Number of HSP's successfully gapped: 14 Length of query: 779 Length of database: 1,619,870 Length adjustment: 93 Effective length of query: 686 Effective length of database: 1,179,515 Effective search space: 809147290 Effective search space used: 809147290 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 134 (56.2 bits)