BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0223.p
         (327 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310344|ref|YP_003774436.1| fumarylacetoacetate hydrolase f...   528   e-151

>gi|300310344|ref|YP_003774436.1| fumarylacetoacetate hydrolase
           family protein [Herbaspirillum seropedicae SmR1]
          Length = 327

 Score =  528 bits (1359), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 256/326 (78%), Positives = 287/326 (88%)

Query: 1   MKFATLRDGTPDGALVLVARNAATALPVPRIARTLIDALARWDEVTPALAERYQALNEGR 60
           MK ATL DG+ DGAL+LV+R+   A+PVP+IA +L+DA+ RWD+V P L ERY+ALN+G 
Sbjct: 1   MKLATLPDGSLDGALLLVSRDQRHAVPVPQIAASLLDAVQRWDQVQPLLQERYEALNQGG 60

Query: 61  ADGAIAFDAQLCMAPLPRAPQWLDASAFLNHGRLMEEAFKTPPIPYFDTVPVMYQGASDD 120
              AIAFD + C+APLPR+PQWLDASAFLNHGRLMEEAFKTPPIP+FDTVPVMYQGASDD
Sbjct: 61  LTEAIAFDPRQCIAPLPRSPQWLDASAFLNHGRLMEEAFKTPPIPHFDTVPVMYQGASDD 120

Query: 121 LLGPHQDVPLRSEAEGIDFEGEFGVVVGPVAMGATPDEALQAVRLVVQLNDWSLRALGPH 180
            LGP+QDV L SE +GIDFEGEFGV+VGPV MG    +ALQAVRL+VQ+NDWSLRALGPH
Sbjct: 121 FLGPYQDVALPSEEDGIDFEGEFGVIVGPVPMGVQASQALQAVRLLVQINDWSLRALGPH 180

Query: 181 EMKTGFGFLQAKPSTAFAPIAVTPDELGDAWRDGRVQMRLQVQWNGARFGEPHGGEMNFS 240
           EMKTGFGFLQAKPSTAFAP+AVTPDELG AWRDGRVQMRLQVQWNG  FG PHGGEMNFS
Sbjct: 181 EMKTGFGFLQAKPSTAFAPMAVTPDELGPAWRDGRVQMRLQVQWNGQPFGHPHGGEMNFS 240

Query: 241 FGQLIAHAAHSRRLTAGCIIGSGTVSNVARVAGSACIAERRVIEKIDHGEIRTGFMHFGD 300
           FG+LIAHAA SRRLTAG +IGSGTVSN +R AGSACIAERRVIEKIDHG+IRTGFM FGD
Sbjct: 241 FGELIAHAARSRRLTAGTVIGSGTVSNQSRAAGSACIAERRVIEKIDHGDIRTGFMRFGD 300

Query: 301 EVRMQAHYEDGRPGPFGIVQQRVVQA 326
           EV MQA ++DGR GPFG++QQRVV A
Sbjct: 301 EVSMQACFDDGRSGPFGLLQQRVVPA 326


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.322    0.137    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,160,869
Number of extensions: 51435
Number of successful extensions: 160
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 160
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 1,619,870
Length adjustment: 85
Effective length of query: 242
Effective length of database: 1,217,395
Effective search space: 294609590
Effective search space used: 294609590
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 131 (55.1 bits)