BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0212.p (813 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300309869|ref|YP_003773961.1| TonB-dependent ferric sideropho... 907 0.0 gi|300309379|ref|YP_003773471.1| TonB-dependent ferric sideropho... 638 0.0 gi|300311911|ref|YP_003776003.1| TonB-dependent siderophore rece... 404 e-113 gi|300310319|ref|YP_003774411.1| TonB-dependent siderophore rece... 190 4e-49 gi|300312129|ref|YP_003776221.1| TonB-dependent ferric sideropho... 129 1e-30 >gi|300309869|ref|YP_003773961.1| TonB-dependent ferric siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 725 Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/721 (63%), Positives = 557/721 (77%), Gaps = 26/721 (3%) Query: 98 QAIRNADGGYTVAAPTA---TNGSNANAVLPTVTITESADPTAP--YAGGLVARGGSLGV 152 QA R G +AAP A +G+ +A LPTVT+T +D P YAGG VARGG LGV Sbjct: 26 QAARLLVLGTLLAAPAAFAQDSGTAQDASLPTVTVTGRSDTGLPAAYAGGQVARGGGLGV 85 Query: 153 LGTASVMDTPFSTTNYTSQGIEDVQARAIGDVIANDASVRNTNGNGGFGDSYQIRGFTMS 212 LGT V+DTPFST NYT +GI+++QAR +GDVI ++ASVRNTNG+GGFGDSYQIRG +S Sbjct: 86 LGTQDVLDTPFSTLNYTVEGIKNLQARTVGDVITSEASVRNTNGDGGFGDSYQIRGLPVS 145 Query: 213 ANDVAFNGLYGMVPLTRMPISMVERIEVLKGPGTLMYGMGPAGGVGGAVNLIPKRAHEDP 272 ND FNGLYG+V L+RM +M+ER+EVLKGPGTLMYGMGPAGGVGGA+NL+ KRA E+P Sbjct: 146 VNDTGFNGLYGLVSLSRMSTAMLERVEVLKGPGTLMYGMGPAGGVGGAINLVSKRAGEEP 205 Query: 273 ISSVTATYLSNSQFGLKADLGRRFGEQQEWGIRVNALYADGNTGLSGSNQQQNMGSVGLD 332 +SS+TATY+ ++Q GL+ D+GRRFG+ +EWGIRVNALYADG T ++ + QQQ+MGS+ LD Sbjct: 206 VSSLTATYVGSAQLGLQGDIGRRFGQDKEWGIRVNALYADGRTSVADNRQQQSMGSLALD 265 Query: 333 YNGGRVRWSLDAYTQHEDARNFRPQFSISSLVMPEAPSGKTNLYPGTTLQSDDKAVATRL 392 Y G ++RW+LDAYTQHED RNFRPQFSI + MP AP+G +NLYPG TLQ DDK VATRL Sbjct: 266 YTGRKLRWTLDAYTQHEDTRNFRPQFSIGTTSMPSAPAGDSNLYPGNTLQIDDKVVATRL 325 Query: 393 EYDINDHLTAYGAVGYHEATSSQSWPSATILNAAGDTAALYNGYYDQKVVSTSADVNRTH 452 EYD+ + LTAYGA+GYHE ++QS+PSATI G T ++ NGYYDQKVVSTSA Sbjct: 326 EYDLTEQLTAYGAIGYHEGATAQSFPSATITGLDGAT-SVRNGYYDQKVVSTSA------ 378 Query: 453 KPLITPPPPPPPPDVGMRARFNTGGIKHTVMLGVNMLDQQTDYFFLSESSSVTSNLYRPV 512 DVG+RARF TG ++HT+ + N LDQQT YF+ ++ V SNLY+P Sbjct: 379 -------------DVGLRARFATGPVQHTLSMAANTLDQQTSYFYFVNATGVASNLYQPA 425 Query: 513 ALPVVSGARGEPTPQSQIRLTSVALTDTLSLADDRLRITAGLRRQQVYSHSLVDATQTSN 572 L V+ ARGEP PQSQ RL+ +ALTDTLS+AD RL +T GLRRQQVYS+S +SN Sbjct: 426 PLAPVTAARGEPLPQSQTRLSGLALTDTLSIADGRLLLTGGLRRQQVYSNS-FSTRSSSN 484 Query: 573 KTAISPVLGVVVKPVQNVSLYANYTAALSAGGFTSASDGNPNQLFPPYKSKQVETGAKID 632 K SPVLGVVVKP++N+SLYANYTA LSAGGF A N Q F PYK+KQ E+G K+D Sbjct: 485 KIGYSPVLGVVVKPLENLSLYANYTAGLSAGGFAGAQYANAGQAFAPYKTKQYESGVKLD 544 Query: 633 WGRITTTAAVFQIEQANSSTTLVNGVSTTTQDGRNRVRGLELAAYGELQRGLRFNASGTF 692 WGR+TTTAAVFQIE+ANSST +V + TQDGR RVRGLEL+AYGE QRGLR ASGTF Sbjct: 545 WGRVTTTAAVFQIERANSSTAVVGSQTFATQDGRARVRGLELSAYGEAQRGLRLMASGTF 604 Query: 693 FDAKQYHTDNGTNDGKDVGAIPNSNFNLGLDWDAPWLQGLALNTRVTRTGSMWYSNENKL 752 F+ +Q HT GTNDGK++GA+P NFNLG DWD PWLQGLALNTR+ TG+ WYS+ N + Sbjct: 605 FETRQSHTVGGTNDGKEIGAVPKHNFNLGADWDTPWLQGLALNTRIINTGASWYSDANTV 664 Query: 753 KVPGWTRVDIGARYITRAAGQVVTYRANIENLFDKNYWLMQNGYVGTSSGRTLVLSAQVD 812 KVPGWTR+D+GARY +R GQ +TYRAN+ENLFDK+YW+MQNGY G +GRTLVLSAQVD Sbjct: 665 KVPGWTRMDLGARYTSRLGGQTITYRANLENLFDKHYWIMQNGYAGYGAGRTLVLSAQVD 724 Query: 813 F 813 F Sbjct: 725 F 725 >gi|300309379|ref|YP_003773471.1| TonB-dependent ferric siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 790 Score = 638 bits (1645), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/808 (44%), Positives = 491/808 (60%), Gaps = 43/808 (5%) Query: 17 AILAAFASPVAGVQAQATDAQRQAYDIPAGPLDQSLNSFARRAGVLLSFDPAITRDRQSA 76 A+L A + V QAQAT ++Y IPAG L+ +L F + AG+LLSF P T S Sbjct: 15 ALLLALSGSVT-AQAQAT---WRSYAIPAGKLEDALARFGQEAGLLLSFRPEQTAGMHSE 70 Query: 77 GLSGRYTVAEGFAALLNGTPLQAIRNADGGYTVAAPTATNGSNANAVLPTVTITESADPT 136 GL+G+Y +G AALL GT LQAIR A+G Y + P T A+A LP VTI +AD T Sbjct: 71 GLAGQYESEQGLAALLAGTGLQAIRQANGSYLLK-PVDTL---ASAPLPAVTIRAAAD-T 125 Query: 137 APYAGGLVARGGSLGVLGTASVMDTPFSTTNYTSQGIEDVQARAIGDVIANDASVRNTNG 196 + YAG +ARGG+LGVLG +VMD P +T NYT++ ++D QAR + D + NDAS+R Sbjct: 126 SAYAGAYLARGGALGVLGNRAVMDIPLATLNYTNELLQDQQARTVADAVLNDASIRMLTS 185 Query: 197 NGGFGDSYQIRGFTMSANDVAFNGLYGMVPLTRMPISMVERIEVLKGPGTLMYGMGPAGG 256 GGFG++YQIRG+ +++ DV NGL+G+ RMP M+ER++VLKGPGTL++G+ P G Sbjct: 186 TGGFGETYQIRGYGLTSGDVGVNGLFGLASGNRMPAVMIERVDVLKGPGTLLHGISPEGS 245 Query: 257 VGGAVNLIPKRAHEDPISSVTATYLSNSQFGLKADLGRRFGEQQEWGIRVNALYADGNTG 316 +GG++NL+ KRA ++P++ +TA Y S Q G++ DLGRRFG Q WGIR N + G Sbjct: 246 IGGSINLVTKRAEDEPLTRLTALYQSRRQPGVQVDLGRRFGTQDAWGIRFNTVLRRGEAS 305 Query: 317 LSGSNQQQNMGSVGLDYNGGRVRWSLDAYTQHEDARNFRPQ--FSISSLVMPEAPSGKTN 374 ++G Q G++ LDY G RWSLDAY Q E++ +FRPQ F +P PSG + Sbjct: 306 IAGGRQDAGAGALALDYRGRGWRWSLDAYRQRENSSDFRPQVGFLPGVTALPAPPSGDLD 365 Query: 375 LYPGTTLQSDDKAVATRLEYDINDHLTAYGAVGYHEATSSQSWPSATILNAAGDTAALYN 434 + G L D A+ TR+E ++++ L+AY AVG + + Q+ P+ ++ +A+G ++ N Sbjct: 366 FFSGNQLSFQDDALLTRVEVELSEQLSAYAAVGQRRSATQQNLPTGSV-DASG-AGSVRN 423 Query: 435 GYYDQKVVSTSADVNRTHKPLITPPPPPPPPDVGMRARFNTGGIKHTVMLGVNMLDQQTD 494 YYD + SA D G+R + TG ++H V LGV L QQ Sbjct: 424 AYYDTASRTLSA-------------------DAGLRLQAATGAVRHGVSLGVTRLRQQAG 464 Query: 495 YFFLSESSSVTSNLYRPVALPVVSGARGEPTPQSQIRLTSVALTDTLSLADDRLRITAGL 554 +L + S +LY P LPV+S AR EP + L S++LTDTL L +DRL++ G Sbjct: 465 NAYLVSADSSAYSLYAPATLPVISAARTEPRKAYDMTLDSLSLTDTLRLLEDRLQLLVGA 524 Query: 555 RRQQVYSHSL--VDATQTSN--KTAISPVLGVVVKPVQNVSLYANYTAALSAGGFTSASD 610 RRQ V S V Q S+ +AISP+LG+VVKPV +SLYAN T+ L+ G Sbjct: 525 RRQSVRYDSFDTVSGAQLSSYEASAISPLLGLVVKPVAGLSLYANTTSGLTRGTIVPTGL 584 Query: 611 GNPNQLFPPYKSKQVETGAKIDWGRITTTAAVFQIEQANSSTTLVNGVSTTTQ-----DG 665 N Q+ PY+S+Q+E GAK+DWGR+ T AA FQI+ N S + ST DG Sbjct: 585 ANAGQVLAPYRSRQLEAGAKLDWGRVMTQAAWFQID--NPSAVITTQASTPASSSYGYDG 642 Query: 666 RNRVRGLELAAYGELQRGLRFNASGTFFDAKQYHTDNGTNDGKDVGAIPNSNFNLGLDWD 725 R R RGLEL+AYGEL RGLR AS TF+ A+ T NG NDG+ +P NL LDW+ Sbjct: 643 RQRNRGLELSAYGELMRGLRLLASATFYQARLLRTANGLNDGRTAPGVPLRAANLSLDWE 702 Query: 726 APWLQGLALNTRVTRTGSMWYSNENKLKVPGWTRVDIGARYITRAAGQVVTYRANIENLF 785 L GLA + R+ TG ++Y N L++P WTR D+G RY +R + V +R N+ENLF Sbjct: 703 PAGLPGLAFSGRMIHTGPVYYDAANTLRLPSWTRWDLGVRYRSRLGERPVVWRLNVENLF 762 Query: 786 DKNYWLMQNGYVGTSSGRTLVLSAQVDF 813 + + WL+ YV ++ RT++LS QVD+ Sbjct: 763 NHSTWLLDKPYVTVAAPRTVLLSMQVDW 790 >gi|300311911|ref|YP_003776003.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 733 Score = 404 bits (1037), Expect = e-113, Method: Compositional matrix adjust. Identities = 257/719 (35%), Positives = 382/719 (53%), Gaps = 54/719 (7%) Query: 124 LPTVTITESADPTA-----PYAGGLVARGGSLGVLGTASVMDTPFSTTNYTSQGIEDVQA 178 LPTVT+ SAD +A +AGG VARG LGVLG +D+P + YT Q I D QA Sbjct: 40 LPTVTVNASADASADGLPAEFAGGQVARGSRLGVLGNVDNLDSPVRSVAYTQQLIADQQA 99 Query: 179 RAIGDVIANDASVRNTNGNGGFGDSYQIRGFTMSANDVAFNGLYGMVPLTRMPISMVERI 238 +GDV+ ND VR T G G F +SY IRGF +++D+ +NGL+G++P + M+ER+ Sbjct: 100 HGVGDVLKNDPVVRTTRGFGNFQESYMIRGFIANSDDLMYNGLFGILPRQYVASEMMERV 159 Query: 239 EVLKGPGTLMYGMGPA-GGVGGAVNLIPKRAHEDPISSVTATYLS-NSQFGLKADLGRRF 296 EV G + G P G+GG +N++PKRA +P++ +T Y S NSQ+ D+ RRF Sbjct: 160 EVQYGASAFLNGATPGDAGLGGTINIVPKRAANEPLTDLTLGYESGNSQYA-ALDVSRRF 218 Query: 297 GEQQEWGIRVNALYADGNTGLSGSNQQQNMGSVGLDYNGGRVRWSLDAYTQHEDARNFRP 356 G Q+ G+R+NA G TG++ ++ N+ S+G+DY G R S D Q + N RP Sbjct: 219 GPQERLGVRINAARHAGGTGVANERRETNLFSLGVDYRGNDFRLSADLGLQENNLSNVRP 278 Query: 357 QFSISSLV--MPEAPSGKTNL-YPGTTLQSDDKAVATRLEYDINDHLTAYGAVGYHEATS 413 +I + + +P APSG N P + + D R E+D++ TA+ A G + T Sbjct: 279 SVTIGAGLTSLPVAPSGSANYGQPWSYSNARDLFGTVRGEWDLSSSTTAWAAFGARQGTE 338 Query: 414 SQSWPSATILNAAGDTAALYNGYYD---QKVVSTSADVNRTHKPLITPPPPPPPPDVGMR 470 + S + NA+ AA Y +D Q V+T +VG+R Sbjct: 339 NNSLSGVRVTNASTGAAATYR--FDNARQDDVATG--------------------EVGVR 376 Query: 471 ARFNTGGIKHTVMLGVNMLDQQT-DYFFLSESSSVTSNLYRPV-----ALPVVSGARGEP 524 TG + H ++ + + + + LS S ++ +NLY P AL + + +P Sbjct: 377 THLQTGAVSHKLVAAASAYSLNSRNAYGLSPSYALATNLYNPTNYAQPALTSLGNSLADP 436 Query: 525 TPQSQIRLTSVALTDTLSLADDRLRITAGLRRQQVYSHSLVDATQTS----NKTAISPVL 580 + L S ++DTL DDR+ +T G+R+QQ+ S + TQ + +++A SP+ Sbjct: 437 QTTIKTNLLSAVVSDTLGFYDDRVLVTVGVRQQQLKSDTYAYNTQANTAHYDQSATSPMA 496 Query: 581 GVVVKPVQNVSLYANYTAALSAGG-FTSASDGNPNQLFPPYKSKQVETGAKIDWGRITTT 639 GVV K + +S+Y NY L G T + N Q+ PYKSKQ E G K + G + Sbjct: 497 GVVFKLTKTLSVYGNYIEGLQQGKQITDTTAANYGQVLAPYKSKQKEVGVKYELGGLGLG 556 Query: 640 AAVFQIEQANSSTTLVNGVSTTTQDGRNRVRGLELAAYGELQRGLRFNASGTFFDAKQYH 699 AA F ++ S V + T +G+ R RG+EL AYGE+ +G+R + TF DAKQ Sbjct: 557 AAFFTTDRPLSYKDAVTNIEAT--NGKQRNRGVELTAYGEVTKGVRLLSGLTFLDAKQVQ 614 Query: 700 TDNGTNDGKDVGAIPNSNFNLGLDWDAPWLQGLALNTRVTRTGSMWYSNENKLKVPGWTR 759 T++ N+GK +P N GL+ D P ++GL LN R T T + + N+L+VP W R Sbjct: 615 TNSSANNGKYAIGVPRVQANAGLEVDVPGVRGLTLNGRATYTSTQYVDAANQLEVPSWVR 674 Query: 760 VDIGARYITRAAGQVVTYRANIENLFDKNYW-----LMQNGYVGTSSGRTLVLSAQVDF 813 D+GARY+T G VT RA+I+N+ ++NYW +GY+ + RT S V F Sbjct: 675 YDLGARYLTDIGGHAVTLRASIDNVANRNYWQSAGGASNSGYLVAGNPRTFSTSVSVAF 733 >gi|300310319|ref|YP_003774411.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 723 Score = 190 bits (482), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 206/729 (28%), Positives = 319/729 (43%), Gaps = 54/729 (7%) Query: 108 TVAAPTATNGSNANAVLPTVTITESADPTAPYAGGLVARGGSLGVLGTASVMDTPFSTTN 167 T AA T+ N + LPT+ +T S A G AR S+ A ++DTP S + Sbjct: 26 TRAADTSDN-QGQDQSLPTINVTASG------ATGTQARSASVAGFDDAPLLDTPASVSV 78 Query: 168 YTSQGIEDVQARAIGDVIANDASVRNTNGNGGFGDSYQIRGFTMS-ANDVAFNGLYGMVP 226 TS ++D Q+R + DV+ NDAS+ G+ +++ IRGFT+ A+ NGL Sbjct: 79 VTSAQMKDQQSRLLSDVVKNDASINENYAPVGYYENFSIRGFTLDPASAYRVNGLTVAGE 138 Query: 227 LTRMPISMVERIEVLKGPGTLMYGMGPAGGVGGAVNLIPKRAHEDPISSVTATYLSNSQF 286 T + + ER+E LKG L G+ AGG+ VN + KR + S+T SN Sbjct: 139 QT-IALENKERVEFLKGVAGLQAGVVAAGGL---VNYVTKRPAN--VRSITLGTDSNGSR 192 Query: 287 GLKADLGRRFGEQQEWGIRVNALYADGNTGLSGSNQQQNMGSVGLDYN-GGRVRWSLDAY 345 L DLG FGE +++G+R+NA + D ++ +S + ++ S+ + R DA Sbjct: 193 YLATDLGALFGEHKQFGLRINAAHEDIHSYVSNGDGWRDFASLSATWAISARTLVQFDAE 252 Query: 346 TQHEDARNFRPQFSISSLVMPEAPSGKTNLYPGTTLQS-DDKAVATRLEYD--INDHLTA 402 Q + R+ + +P S T L P Q D +V RL D N Sbjct: 253 YQQKAQRSVAGYQLLGGATLPSGVSPSTMLTPQPWSQPVRDSSVNARLRIDTEFNADWRG 312 Query: 403 YGAVGYHEATSSQ--SWPSATILNAAGDTAALYNGYYDQKVVSTSADVNRTHKPLITPPP 460 Y G A ++P + A+ AA NG +D D R + Sbjct: 313 YVQAGRSRAVIDDYLAFPYGSGNGASPTFAA--NGDFDVYDYRVPNDERRNDEVQAVA-- 368 Query: 461 PPPPPDVGMRARFNTGGIKHTVMLGVNMLDQQTDYFFLSESSSV---TSNLYR--PVALP 515 +G +F +G ++H + LG+ M + D S+ SV N+Y PV LP Sbjct: 369 ------IG---KFASGWVQHELTLGMAMSRRIVDK---SDGISVLVGQGNIYNGTPV-LP 415 Query: 516 VVSGARGEPTPQSQIRLTSVALTDTLSLADDRLRITAGLRRQQVYSHSLVD---ATQTSN 572 + R ++ +D + + R ++ AG R+ + S T+ ++ Sbjct: 416 AANAVIPAAYRNLDSRQKALFFSDRMQFSQ-RWQVLAGGRQVWLNEQSFNSTGAVTRDTS 474 Query: 573 KTAISPVLGVVVKPVQNVSLYANYTAALSAGGFTSASDGNPNQLFPPYKSKQVETGAKID 632 + P L ++ KPVQN+SLY +Y LS G N PP ++Q+E G K + Sbjct: 475 RNLFLPQLALIFKPVQNLSLYGSYAETLSLGSSAPFWVSNFPVTLPPSVARQLEAGVKYE 534 Query: 633 WG-RITTTAAVFQIEQANSSTTLVNGVS--TTTQDGRNRVRGLELAAYGELQRGLRFNAS 689 + + TAAVF+ +A N + T Q G+ G+EL A G+L L A+ Sbjct: 535 FSPELALTAAVFRTRKAYEYQKPDNSPTGFTYVQQGQQTNTGVELGANGKLTPRLAIGAA 594 Query: 690 GTFFDAKQYHTDNGTNDGKDVGAIPNSNFNLGLDWDAPWLQGLALNTRVTRTGSMWYSNE 749 T A+ T D + V +P + D+ P ++G+ + + S + + Sbjct: 595 ATVLRARASDTGTARFDDQQVVNVPRLRTAVYADYAVPGMEGVNVMGSWNYSASKPATRD 654 Query: 750 NKLKVPGWTRVDIGARYITRAAGQVVTYRANIENLFDKNYW-----LMQNGYVGTSSGRT 804 + +P + G RY R G T RANI+NLFDK YW + +GYV + RT Sbjct: 655 GSVNLPAVHVFNAGLRYQLRVNGHAATLRANIDNLFDKRYWKDAGQYLGDGYVHLGAPRT 714 Query: 805 LVLSAQVDF 813 LS Q DF Sbjct: 715 ARLSLQYDF 723 >gi|300312129|ref|YP_003776221.1| TonB-dependent ferric siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 796 Score = 129 bits (323), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 197/828 (23%), Positives = 330/828 (39%), Gaps = 133/828 (16%) Query: 43 IPAGPLDQSLNSFARRAGVLLSFDPAITRDRQSAGLSGRYTVAEGFAALLNGTPLQAIRN 102 +P+GPLDQ+L A+++G+L+S++PA+ + QSA + G +T E L+ T L+ + Sbjct: 45 LPSGPLDQTLLRIAQQSGLLISYEPALVKSLQSAPVEGNFTAPEAIKKALSNTGLELVAT 104 Query: 103 ADGGYTV-----AAPTAT-----NGSNANAVLPTVTITESADPTAPYAGGLVARGGSLGV 152 G +T+ A+ T+T + + A+A LP +++ +AD G VA + Sbjct: 105 PSGKWTLRPVAGASTTSTTETPAHKAIADAELPLISVAATADSGGT---GFVAESSATFS 161 Query: 153 LGTASVMDTPFSTTNYTSQGIEDVQARAIGDVIANDASVRNTNGNGGFGDSYQIRGFTMS 212 + +TP S + + I+ A+ + DV+ N + V G G S+ IRG+ + Sbjct: 162 RTDTPLSETPKSVSVINAAVIQSQSAQTLSDVLRNASGVVARPGPYGV-PSFAIRGYVGN 220 Query: 213 ANDVAFNGL--YGMV--PLTRMPISMVERIEVLKGPGTLMYGMGPAGGVGGAVNLIPKRA 268 A V +GL YG P P + +EV+KGP +M P GGV VN+I K Sbjct: 221 A-PVMSDGLSSYGSAASPAALTPTIAIAGVEVVKGPSAIMAADAPPGGV---VNVIKKAP 276 Query: 269 HEDPISSVTATYLSNSQFGLKADLGRRFGEQQEWGIRVNALYADGNTGLSGSNQQQNMGS 328 +P V Y SNS + D E + R +S +N Sbjct: 277 QVEPFHEVQVAYGSNSFSQVAFDSTGAIDEDKRLRYRFV---------VSADKSSENF-- 325 Query: 329 VGLDYNGGR-------VRWS-----LDAYTQHEDARNFRPQFSISSLV------MPEAPS 370 + Y+GGR ++W L H R PQ+++ E P Sbjct: 326 --MGYDGGRHFYIAPTLQWKDRSTDLTLGYAHTVTREPFPQYTVGYARGGYVDGYVEHPL 383 Query: 371 GKTNLYPGTTLQSDDKAVATRLEYDINDHLTAYGAVGYHEATSSQS-WPSATILNAAGDT 429 G G + +LE ++D+LT GY T Q W +A+ + + Sbjct: 384 GNR----GDHFSMTADELTAKLEQKLSDNLTFVSKNGYTSTTQGQDGWAAASTVTNSNAL 439 Query: 430 AALYNGYYDQKVVSTSADVNRTHKPLITPPPPPPPPDVGMRARFNTGGIKHTVMLGVNML 489 L G+ T+ N +R + + G+K T ++GV+ Sbjct: 440 TLL--GFKSSANYYTANSQNY------------------LRLKSDLAGVKSTTLVGVDY- 478 Query: 490 DQQTDYFFLSESSSVTSNL--------YRPVALPVVSGARGEPTPQSQIRLTSVALTDTL 541 Y +SS T+ + P++ P+ G Q + L + L Sbjct: 479 -SYMHYVQYDRNSSSTTTIPDIFGTINVAPISSPLTYQFGG------QTQRVGSYLQEQL 531 Query: 542 SLADDRLRITAGLRRQQVYSHSLVDATQTS---NKTAISPVLGVVVKPVQNVSLYANYTA 598 ++ L + A +RR S + + S ++TA SP LG++ + ++ Y N+ Sbjct: 532 IYSN--LTVLASIRRDSYLSSTNIVGRAPSGGMHQTAYSPSLGLMYQLTPEIAPYVNWNK 589 Query: 599 ALSAGGFTSASDGNPNQLFPPYKSKQVETGAKIDW--GRITTTAAVFQIEQANSSTT--L 654 T+ G L P +S+Q E G K + ++ T A++ I+ N S + + Sbjct: 590 GFQPNNVTAYGGG----LLAPKQSEQFEAGVKFNLMDDKLELTTALYHIDYTNQSISDPV 645 Query: 655 VNGVSTTTQDGRNRVRGLELAAYGELQRGLRFNASGTFFDAKQYHTDNGTNDGKDVGAIP 714 G +T G +GLE+ G++ GL A QY +N D + Sbjct: 646 HRGFYIST--GGAVSQGLEVELKGQIMPGLNVIA--------QYAYNNYVQDYAPTVKV- 694 Query: 715 NSNFNLGLDWD-----APWLQGLALNTRVTRTGSMWYSNENKLKVPGWTRVDIGARYITR 769 N + G W +P LQG + V + + VPG T D+G Y Sbjct: 695 NLPHHTGSIWTTYNFRSPALQGFGVGMGVFMSSGQDVGSTGNYHVPGQTETDLGLFY--- 751 Query: 770 AAGQVVTYRAN--IENLFDKNYWLMQN--GYVGTSSGRTLVLSAQVDF 813 ++ Y N ++NLF+ + ++ RTL+L+ DF Sbjct: 752 ---KMEKYSLNLSVKNLFNHKLYSSSTSASFIPMGPERTLMLTGTYDF 796 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.314 0.131 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,572,156 Number of extensions: 112506 Number of successful extensions: 325 Number of sequences better than 1.0e-08: 19 Number of HSP's gapped: 280 Number of HSP's successfully gapped: 27 Length of query: 813 Length of database: 1,619,870 Length adjustment: 93 Effective length of query: 720 Effective length of database: 1,179,515 Effective search space: 849250800 Effective search space used: 849250800 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 135 (56.6 bits)