BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0182.p (735 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310319|ref|YP_003774411.1| TonB-dependent siderophore rece... 1178 0.0 gi|300309869|ref|YP_003773961.1| TonB-dependent ferric sideropho... 164 3e-41 gi|300309379|ref|YP_003773471.1| TonB-dependent ferric sideropho... 160 3e-40 gi|300311911|ref|YP_003776003.1| TonB-dependent siderophore rece... 159 5e-40 gi|300310859|ref|YP_003774951.1| TonB-dependent siderophore rece... 130 5e-31 >gi|300310319|ref|YP_003774411.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 723 Score = 1178 bits (3048), Expect = 0.0, Method: Compositional matrix adjust. Identities = 563/660 (85%), Positives = 619/660 (93%) Query: 1 VAGFDDAPLIDTPASVAVVTAAQMQDQQSRLLSDVAKNDASINENYAPVGYYENFSIRGI 60 VAGFDDAPL+DTPASV+VVT+AQM+DQQSRLLSDV KNDASINENYAPVGYYENFSIRG Sbjct: 61 VAGFDDAPLLDTPASVSVVTSAQMKDQQSRLLSDVVKNDASINENYAPVGYYENFSIRGF 120 Query: 61 TLDPASAYRIDGLTVAGEHTIALENKERVEFLKGVAGLQAGVSSAGGIVNYVTKRPADVR 120 TLDPASAYR++GLTVAGE TIALENKERVEFLKGVAGLQAGV +AGG+VNYVTKRPA+VR Sbjct: 121 TLDPASAYRVNGLTVAGEQTIALENKERVEFLKGVAGLQAGVVAAGGLVNYVTKRPANVR 180 Query: 121 SITLGTDSYGSRYLATDLGTLFGEQKQFGMRINAAHEDIHSYVNNGDGWRDFASVSATWA 180 SITLGTDS GSRYLATDLG LFGE KQFG+RINAAHEDIHSYV+NGDGWRDFAS+SATWA Sbjct: 181 SITLGTDSNGSRYLATDLGALFGEHKQFGLRINAAHEDIHSYVSNGDGWRDFASLSATWA 240 Query: 181 LSSKTLVQFDAEYQQKAQHSVAGYQLLGGTTLPSGVSPRTMLTPQSWAQPVRDSSLNYRL 240 +S++TLVQFDAEYQQKAQ SVAGYQLLGG TLPSGVSP TMLTPQ W+QPVRDSS+N RL Sbjct: 241 ISARTLVQFDAEYQQKAQRSVAGYQLLGGATLPSGVSPSTMLTPQPWSQPVRDSSVNARL 300 Query: 241 RVDTDFNANWHGYVQAGRSRAVIDDYLAFPYGSGGGASSTFAANGDFDVYDYRVPNDERR 300 R+DT+FNA+W GYVQAGRSRAVIDDYLAFPYGSG GAS TFAANGDFDVYDYRVPNDERR Sbjct: 301 RIDTEFNADWRGYVQAGRSRAVIDDYLAFPYGSGNGASPTFAANGDFDVYDYRVPNDERR 360 Query: 301 NDEAQAVMIGKFATGWLKHELTMGVAMSRRVVDKSDGISVLVGSGNIYSGTPALAPATDV 360 NDE QAV IGKFA+GW++HELT+G+AMSRR+VDKSDGISVLVG GNIY+GTP L A V Sbjct: 361 NDEVQAVAIGKFASGWVQHELTLGMAMSRRIVDKSDGISVLVGQGNIYNGTPVLPAANAV 420 Query: 361 PGAAYRNLDSRQKALFFSDRLQFSERWQAIAGGRQVWLNEQAFASDGSVTRATSRNLFLP 420 AAYRNLDSRQKALFFSDR+QFS+RWQ +AGGRQVWLNEQ+F S G+VTR TSRNLFLP Sbjct: 421 IPAAYRNLDSRQKALFFSDRMQFSQRWQVLAGGRQVWLNEQSFNSTGAVTRDTSRNLFLP 480 Query: 421 QLALIFKPMQNVSLYGSYAETLTLGTSAPFWVSNFPTTLPPSVARQLEAGVKYDVSPDLA 480 QLALIFKP+QN+SLYGSYAETL+LG+SAPFWVSNFP TLPPSVARQLEAGVKY+ SP+LA Sbjct: 481 QLALIFKPVQNLSLYGSYAETLSLGSSAPFWVSNFPVTLPPSVARQLEAGVKYEFSPELA 540 Query: 481 LTAAVFRIRKAYEYQQPDNSSSGFTYVQQGQQTNTGLELGASGKLTPRLAVGASVTATRA 540 LTAAVFR RKAYEYQ+PDNS +GFTYVQQGQQTNTG+ELGA+GKLTPRLA+GA+ T RA Sbjct: 541 LTAAVFRTRKAYEYQKPDNSPTGFTYVQQGQQTNTGVELGANGKLTPRLAIGAAATVLRA 600 Query: 541 RASDTGTAAYDGQQVVNVPRLRSSVYADYALPGVEGVNLMGSWLYSASKPATRDGSVSLP 600 RASDTGTA +D QQVVNVPRLR++VYADYA+PG+EGVN+MGSW YSASKPATRDGSV+LP Sbjct: 601 RASDTGTARFDDQQVVNVPRLRTAVYADYAVPGMEGVNVMGSWNYSASKPATRDGSVNLP 660 Query: 601 AVHVFNAGLRYKLRISGHTATLRANLDNVFDKRYWKDAGQYLGDGYVHLGAPRTARLSLH 660 AVHVFNAGLRY+LR++GH ATLRAN+DN+FDKRYWKDAGQYLGDGYVHLGAPRTARLSL Sbjct: 661 AVHVFNAGLRYQLRVNGHAATLRANIDNLFDKRYWKDAGQYLGDGYVHLGAPRTARLSLQ 720 >gi|300309869|ref|YP_003773961.1| TonB-dependent ferric siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 725 Score = 164 bits (414), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 180/662 (27%), Positives = 298/662 (45%), Gaps = 44/662 (6%) Query: 9 LIDTPASVAVVTAAQMQDQQSRLLSDVAKNDASINENYAPVGYYENFSIRG--ITLDPAS 66 ++DTP S T +++ Q+R + DV ++AS+ G+ +++ IRG ++++ Sbjct: 91 VLDTPFSTLNYTVEGIKNLQARTVGDVITSEASVRNTNGDGGFGDSYQIRGLPVSVNDTG 150 Query: 67 AYRIDGLTVAGEHTIALENKERVEFLKGVAGLQ---AGVSSAGGIVNYVTKRPADVRSIT 123 + GL + A+ ERVE LKG L GG +N V+KR + + Sbjct: 151 FNGLYGLVSLSRMSTAM--LERVEVLKGPGTLMYGMGPAGGVGGAINLVSKRAGEEPVSS 208 Query: 124 LGTDSYGSRYLAT--DLGTLFGEQKQFGMRINAAHEDIHSYVNNGDGWRDFASVSATWAL 181 L GS L D+G FG+ K++G+R+NA + D + V + + S++ + Sbjct: 209 LTATYVGSAQLGLQGDIGRRFGQDKEWGIRVNALYADGRTSVADNRQQQSMGSLALDYT- 267 Query: 182 SSKTLVQFDAEYQQKAQHSVAGYQLLGGTTLPSGVSPRTMLTPQSWAQPVRDSSLNYRLR 241 K DA Q + + +G T++PS + + L P + Q + D + RL Sbjct: 268 GRKLRWTLDAYTQHEDTRNFRPQFSIGTTSMPSAPAGDSNLYPGNTLQ-IDDKVVATRLE 326 Query: 242 VDTDFNANWHGYVQAGRSRAVIDDYLAFPYGSGGGAS-STFAANGDFDVYDYRVPNDERR 300 D +G + G +FP + G +T NG YD +V + Sbjct: 327 YDLTEQLTAYGAI--GYHEGATAQ--SFPSATITGLDGATSVRNG---YYDQKVVSTS-- 377 Query: 301 NDEAQAVMIGKFATGWLKHELTMGVAMSRRVVDKSDGISVLVGS----GNIYSGTPALAP 356 A + +FATG ++H L+M +D+ V + N+Y P LAP Sbjct: 378 ---ADVGLRARFATGPVQHTLSMAA----NTLDQQTSYFYFVNATGVASNLYQPAP-LAP 429 Query: 357 ATDVPGAAYRNLDSRQKALFFSDRLQFSERWQAIAGGRQVWLNEQAFASDGSVTRATSRN 416 T G +R L +D L ++ + GG + +Q +++ S ++++ Sbjct: 430 VTAARGEPLPQSQTRLSGLALTDTLSIADGRLLLTGGLR---RQQVYSNSFSTRSSSNKI 486 Query: 417 LFLPQLALIFKPMQNVSLYGSYAETLTLGTSAPFWVSNFPTTLPPSVARQLEAGVKYDVS 476 + P L ++ KP++N+SLY +Y L+ G A +N P +Q E+GVK D Sbjct: 487 GYSPVLGVVVKPLENLSLYANYTAGLSAGGFAGAQYANAGQAFAPYKTKQYESGVKLDWG 546 Query: 477 PDLALTAAVFRIRKAYEYQQPDNSSSGFTYVQQGQQTNTGLELGASGKLTPRLAVGASVT 536 + TAAVF+I +A S + T Q G+ GLEL A G+ L + AS T Sbjct: 547 -RVTTTAAVFQIERANSSTAVVGSQTFAT--QDGRARVRGLELSAYGEAQRGLRLMASGT 603 Query: 537 ATRARASDTGTAAYDGQQVVNVPRLRSSVYADYALPGVEGVNLMGSWLYSASKPATRDGS 596 R S T DG+++ VP+ ++ AD+ P ++G+ L + + + + + Sbjct: 604 FFETRQSHTVGGTNDGKEIGAVPKHNFNLGADWDTPWLQGLALNTRIINTGASWYSDANT 663 Query: 597 VSLPAVHVFNAGLRYKLRISGHTATLRANLDNVFDKRYWKDAGQYLGDGYVHLGAPRTAR 656 V +P + G RY R+ G T T RANL+N+FDK YW + +GY GA RT Sbjct: 664 VKVPGWTRMDLGARYTSRLGGQTITYRANLENLFDKHYW-----IMQNGYAGYGAGRTLV 718 Query: 657 LS 658 LS Sbjct: 719 LS 720 >gi|300309379|ref|YP_003773471.1| TonB-dependent ferric siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 790 Score = 160 bits (406), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 189/684 (27%), Positives = 300/684 (43%), Gaps = 75/684 (10%) Query: 9 LIDTPASVAVVTAAQMQDQQSRLLSDVAKNDASINENYAPVGYYENFSIRGITLDPASAY 68 ++D P + T +QDQQ+R ++D NDASI + G+ E + IRG L Sbjct: 147 VMDIPLATLNYTNELLQDQQARTVADAVLNDASIRMLTSTGGFGETYQIRGYGLTSGDV- 205 Query: 69 RIDGL-TVAGEHTIALENKERVEFLKGVAGLQAGVS---SAGGIVNYVTKRPADVRSITL 124 ++GL +A + + ERV+ LKG L G+S S GG +N VTKR D +T Sbjct: 206 GVNGLFGLASGNRMPAVMIERVDVLKGPGTLLHGISPEGSIGGSINLVTKRAED-EPLTR 264 Query: 125 GTDSYGSRY---LATDLGTLFGEQKQFGMRINAAHEDIHSYVN---------------NG 166 T Y SR + DLG FG Q +G+R N + + G Sbjct: 265 LTALYQSRRQPGVQVDLGRRFGTQDAWGIRFNTVLRRGEASIAGGRQDAGAGALALDYRG 324 Query: 167 DGWRDFASVSATWALSSKTLVQFDAEYQQKAQHSVAGYQLLGGTTLPSGVSPRTMLTPQS 226 GWR W+L + + ++++ + G+ L G T LP+ P L S Sbjct: 325 RGWR--------WSLDAYRQRENSSDFRPQV-----GF-LPGVTALPA--PPSGDLDFFS 368 Query: 227 WAQ-PVRDSSLNYRLRVDTDFNANWHGYVQAGRSRAVIDDYLAFPYGSGGGASSTFAANG 285 Q +D +L RV+ + + Y G+ R+ L P GS + + N Sbjct: 369 GNQLSFQDDAL--LTRVEVELSEQLSAYAAVGQRRSATQQNL--PTGSVDASGAGSVRNA 424 Query: 286 DFDVYDYRVPNDERRNDEAQAVMIGKFATGWLKHELTMGVAMSRRVVDKSDGISVLVGSG 345 +D R A A + + ATG ++H +++GV R+ + +S + Sbjct: 425 YYDTAS--------RTLSADAGLRLQAATGAVRHGVSLGVTRLRQQAGNAYLVSADSSAY 476 Query: 346 NIYS--GTPALAPATDVPGAAYRNLDSRQKALFFSDRLQFSE-RWQAIAGGRQVWLNEQA 402 ++Y+ P ++ A P AY D +L +D L+ E R Q + G R+ + + Sbjct: 477 SLYAPATLPVISAARTEPRKAY---DMTLDSLSLTDTLRLLEDRLQLLVGARRQSVRYDS 533 Query: 403 FAS-DGSVTRATSRNLFLPQLALIFKPMQNVSLYGSYAETLTLGTSAPFWVSNFPTTLPP 461 F + G+ + + P L L+ KP+ +SLY + LT GT P ++N L P Sbjct: 534 FDTVSGAQLSSYEASAISPLLGLVVKPVAGLSLYANTTSGLTRGTIVPTGLANAGQVLAP 593 Query: 462 SVARQLEAGVKYDVSPDLALTAAVFRIRK-----AYEYQQPDNSSSGFTYVQQGQQTNTG 516 +RQLEAG K D + AA F+I + P +SS G+ G+Q N G Sbjct: 594 YRSRQLEAGAKLDWG-RVMTQAAWFQIDNPSAVITTQASTPASSSYGY----DGRQRNRG 648 Query: 517 LELGASGKLTPRLAVGASVTATRARASDTGTAAYDGQQVVNVPRLRSSVYADYALPGVEG 576 LEL A G+L L + AS T +AR T DG+ VP +++ D+ G+ G Sbjct: 649 LELSAYGELMRGLRLLASATFYQARLLRTANGLNDGRTAPGVPLRAANLSLDWEPAGLPG 708 Query: 577 VNLMGSWLYSASKPATRDGSVSLPAVHVFNAGLRYKLRISGHTATLRANLDNVFDKRYWK 636 + G +++ ++ LP+ ++ G+RY+ R+ R N++N+F+ W Sbjct: 709 LAFSGRMIHTGPVYYDAANTLRLPSWTRWDLGVRYRSRLGERPVVWRLNVENLFNHSTW- 767 Query: 637 DAGQYLGDGYVHLGAPRTARLSLH 660 L YV + APRT LS+ Sbjct: 768 ----LLDKPYVTVAAPRTVLLSMQ 787 >gi|300311911|ref|YP_003776003.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 733 Score = 159 bits (403), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 180/679 (26%), Positives = 298/679 (43%), Gaps = 58/679 (8%) Query: 10 IDTPASVAVVTAAQMQDQQSRLLSDVAKNDASINENYAPVGYYENFSIRGITLDPASAYR 69 +D+P T + DQQ+ + DV KND + + E++ IRG + Sbjct: 80 LDSPVRSVAYTQQLIADQQAHGVGDVLKNDPVVRTTRGFGNFQESYMIRGFIANSDDLMY 139 Query: 70 IDGLTVAGEHTIALENKERVE-------FLKGVAGLQAGVSSAGGIVNYVTKRPAD--VR 120 + +A E ERVE FL G AG+ GG +N V KR A+ + Sbjct: 140 NGLFGILPRQYVASEMMERVEVQYGASAFLNGATPGDAGL---GGTINIVPKRAANEPLT 196 Query: 121 SITLGTDSYGSRYLATDLGTLFGEQKQFGMRINAAHEDIHSYVNNGDGWRDFASVSATWA 180 +TLG +S S+Y A D+ FG Q++ G+RINAA + V N + S+ + Sbjct: 197 DLTLGYESGNSQYAALDVSRRFGPQERLGVRINAARHAGGTGVANERRETNLFSLGVDYR 256 Query: 181 LSSKTLVQFDAEYQQKAQHSVAGYQLLGG--TTLPSGVSPRTMLTPQSWAQP-----VRD 233 + L D Q+ +V +G T+LP V+P ++ QP RD Sbjct: 257 GNDFRL-SADLGLQENNLSNVRPSVTIGAGLTSLP--VAPSG---SANYGQPWSYSNARD 310 Query: 234 SSLNYRLRVDTDFNANWHGYVQAGRSRAVIDDYLAFPYGSGGGASSTFAANGDFDVYDYR 293 L +R + D +++ + G + ++ L+ G T A+ G Y + Sbjct: 311 --LFGTVRGEWDLSSSTTAWAAFGARQGTENNSLS-------GVRVTNASTGAAATYRF- 360 Query: 294 VPNDERRNDEAQAVMIG---KFATGWLKHELTMGVAMSRRVVDKSDGIS-VLVGSGNIYS 349 D R D+ +G TG + H+L + + G+S + N+Y+ Sbjct: 361 ---DNARQDDVATGEVGVRTHLQTGAVSHKLVAAASAYSLNSRNAYGLSPSYALATNLYN 417 Query: 350 GTPALAPATDVPGAAYRNLDSRQKALFFS----DRLQF-SERWQAIAGGRQVWLNEQAFA 404 T PA G + + + K S D L F +R G RQ L +A Sbjct: 418 PTNYAQPALTSLGNSLADPQTTIKTNLLSAVVSDTLGFYDDRVLVTVGVRQQQLKSDTYA 477 Query: 405 SDGSVTRAT-SRNLFLPQLALIFKPMQNVSLYGSYAETLTLGTS-APFWVSNFPTTLPPS 462 + A ++ P ++FK + +S+YG+Y E L G +N+ L P Sbjct: 478 YNTQANTAHYDQSATSPMAGVVFKLTKTLSVYGNYIEGLQQGKQITDTTAANYGQVLAPY 537 Query: 463 VARQLEAGVKYDVSPDLALTAAVFRIRKAYEYQQPDNSSSGFTYVQ--QGQQTNTGLELG 520 ++Q E GVKY++ L L AA F + Y+ T ++ G+Q N G+EL Sbjct: 538 KSKQKEVGVKYELG-GLGLGAAFFTTDRPLSYKD------AVTNIEATNGKQRNRGVELT 590 Query: 521 ASGKLTPRLAVGASVTATRARASDTGTAAYDGQQVVNVPRLRSSVYADYALPGVEGVNLM 580 A G++T + + + +T A+ T ++A +G+ + VPR++++ + +PGV G+ L Sbjct: 591 AYGEVTKGVRLLSGLTFLDAKQVQTNSSANNGKYAIGVPRVQANAGLEVDVPGVRGLTLN 650 Query: 581 GSWLYSASKPATRDGSVSLPAVHVFNAGLRYKLRISGHTATLRANLDNVFDKRYWKDAGQ 640 G Y++++ + +P+ ++ G RY I GH TLRA++DNV ++ YW+ AG Sbjct: 651 GRATYTSTQYVDAANQLEVPSWVRYDLGARYLTDIGGHAVTLRASIDNVANRNYWQSAGG 710 Query: 641 YLGDGYVHLGAPRTARLSL 659 GY+ G PRT S+ Sbjct: 711 ASNSGYLVAGNPRTFSTSV 729 >gi|300310859|ref|YP_003774951.1| TonB-dependent siderophore receptor protein [Herbaspirillum seropedicae SmR1] Length = 705 Score = 130 bits (326), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 178/690 (25%), Positives = 302/690 (43%), Gaps = 80/690 (11%) Query: 6 DAPLIDTPASVAVVTAAQMQDQQSRLLSDVAKNDASINENYAPVGYYENFSIRGITLDPA 65 + PL + P SV VV+ + D + L DV + + G ++N+SIRG + Sbjct: 62 ETPLQELPQSVQVVSRQLIDDLAATRLDDVLLYVSGVARQNNFGGLWDNYSIRGFSGSEN 121 Query: 66 SAYRIDGLTVAGEHTIA----LENKERVEFLKGVAGLQAGVSSAGGIVNYVTKRP----A 117 I A A + N E V+FLKG A G S GG +N VTK+P A Sbjct: 122 GGMNILWNGFASNRGYAPPRDMANVESVDFLKGPAAALYGNSEPGGTINVVTKKPQFKSA 181 Query: 118 DVRSITLGT-DSYGSRYLATDLGTLFGEQKQFGMRINAAHEDIHSYVNNGDGWRDFASVS 176 + +++G+ D+Y S +T G L R+NAA E S + R+F + + Sbjct: 182 NALDLSIGSNDAYRSAVDST--GAL---SSTVAYRLNAAMEHKGSMRDQVRSEREFFAPA 236 Query: 177 ATWALSSKTLVQFDAEYQQKAQHSVAGYQLLGGTTLPSGVSPRTMLTPQSWAQPVRDSSL 236 TW L+ T++ ++ E+ ++ G + G +GV P + + ++ + Sbjct: 237 FTWLLTENTILNYEGEFLRQKAPLDRGIVAVNGN---AGVLPVSRFLGEPNDGDIKMQNQ 293 Query: 237 NYRLRVDTDFNANWHGYVQAGRSRAVIDDYLAFPYGSGGGASSTFAANGD-FDVYDYRVP 295 N+ L ++ N NWH +D Y ++ FA D + R Sbjct: 294 NHLLTLEQRLNENWHLRTGIFHKEGSLDGY----------STEAFALQADNATLRRQRRY 343 Query: 296 NDERRNDEA-QAVMIGKFATGWLKHELTMGVAMSRRVVDKS----DGISVLVGSGNIYSG 350 D +D + QA + GKFAT + HE+ +G + +D+ + +V + NIY+ Sbjct: 344 RDYSWHDTSLQAEIGGKFATAGVGHEVLVGTEVDWLTLDQRMLRINPSNVAPYAVNIYN- 402 Query: 351 TPALAPATDVPGAAYRNLDSRQK----ALFFSDRLQFSERWQAIAGGRQVWLNEQAFAS- 405 P A P A N D+ ++ L+ D+L SERW+ +AG R AF S Sbjct: 403 -PVYGQAQPTPTA---NTDTSERQISTGLYLQDQLSLSERWRLLAGVR-----ADAFRST 453 Query: 406 -----DGSVTRATSRNLFLPQLALIFKPMQNVSLYGSYAETLTLGTSAPFWVSNFPTTLP 460 +G+VTR ++ + P+L L + + S+Y S +++ + + + F Sbjct: 454 LNNLRNGAVTR-QDKHAYSPRLGLTYLLTPSWSVYVSASKSFRPNSGSDVSGNAF----S 508 Query: 461 PSVARQLEAGVKYDVSPDLA-LTAAVFRIRKAYEYQQPDNSSSGFTYVQQGQQTNTGLEL 519 P +R EAG+K+ + T AVF I K D ++ F+ + G+ + G+EL Sbjct: 509 PETSRAAEAGLKFQSEDKRSGATLAVFDITKQ-NVLTTDPANPNFS-IAAGEVRSKGVEL 566 Query: 520 GASGKLTPRLAVGASVTATRARASDTGTAAYDGQQVVNVPRLRSSVYADYALPGVEGV-- 577 A+ +L V ++ T A S T G ++VN+PR +S+ A + G Sbjct: 567 DANARLGHHWRVTGNLAYTDAYVSRDNTLPV-GSRLVNIPRSSASLLAVFEDADAHGAPY 625 Query: 578 NLMGSWLYSASKPATRDGSVSLPAVHVFNAGLRY-----KLRISGHTATLRANLDNVFDK 632 + G Y + + GS LP+ +V L Y K+++S +++N+F+K Sbjct: 626 GVGGGLNYVGRRTGDQAGSFMLPS-YVTARALAYWQFTPKMKLS-------LDVNNLFNK 677 Query: 633 RYWKDAGQYLGDGYVHLGAPRTARLSLHXK 662 RY+ + L ++ G R A L+L+ K Sbjct: 678 RYYSSSYNSL---WIMPGDERNATLALNIK 704 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.316 0.132 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 2,290,898 Number of extensions: 97761 Number of successful extensions: 401 Number of sequences better than 1.0e-08: 16 Number of HSP's gapped: 364 Number of HSP's successfully gapped: 20 Length of query: 735 Length of database: 1,619,870 Length adjustment: 92 Effective length of query: 643 Effective length of database: 1,184,250 Effective search space: 761472750 Effective search space used: 761472750 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 134 (56.2 bits)