BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0034.p
         (201 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310057|ref|YP_003774149.1| phosphate starvation-inducible ...   400   e-113
gi|300311398|ref|YP_003775490.1| phosphate starvation-inducible ...    90   1e-19

>gi|300310057|ref|YP_003774149.1| phosphate starvation-inducible
           ATPase [Herbaspirillum seropedicae SmR1]
          Length = 373

 Score =  400 bits (1028), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 197/201 (98%), Positives = 200/201 (99%)

Query: 1   VACAVDALERDAVQRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDRT 60
           VACAVDALERDAVQRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDRT
Sbjct: 173 VACAVDALERDAVQRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDRT 232

Query: 61  QKLFEKQAIEIAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVITGDVT 120
           QKLFEKQAIEIAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVITGDVT
Sbjct: 233 QKLFEKQAIEIAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVITGDVT 292

Query: 121 QVDLHHGQKSGLVDALSVLHDVRGIAFSRFTSADVVRHPLVARIVDAYDAAGNPRPDTAR 180
           QVDLHHGQKSGLVDA+SVLH+VRGIAFSRFTSADVVRHPLVARIVDAYDAAGN +PDTAR
Sbjct: 293 QVDLHHGQKSGLVDAISVLHEVRGIAFSRFTSADVVRHPLVARIVDAYDAAGNSKPDTAR 352

Query: 181 ATARTATNLLTKSAKPRHAKT 201
           ATARTATNLLTKSAKPRHAKT
Sbjct: 353 ATARTATNLLTKSAKPRHAKT 373


>gi|300311398|ref|YP_003775490.1| phosphate starvation-inducible
           ATPase [Herbaspirillum seropedicae SmR1]
          Length = 566

 Score = 89.7 bits (221), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 70/125 (56%), Gaps = 10/125 (8%)

Query: 8   LERDAVQRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDL---------LGFD 58
           LE      I++TR  V  GE +GFLPG   +K+ P++    D L  L          G  
Sbjct: 398 LETKLYNEIIVTRVTVPVGEDIGFLPGTEEEKMGPWMGAFDDNLEVLNKSDGDAGEWGRA 457

Query: 59  RTQKLFEKQAIEIAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVITGD 118
            TQ L  +  I+I  L +MRGRT  + F+I+DEAQN TP+QMK  +TR G G+K V  G+
Sbjct: 458 ATQDLI-RSRIKIKSLNFMRGRTFVNKFLIIDEAQNLTPKQMKTLVTRAGPGTKIVCLGN 516

Query: 119 VTQVD 123
           + Q+D
Sbjct: 517 IAQID 521


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.322    0.136    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 608,099
Number of extensions: 24277
Number of successful extensions: 82
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 81
Number of HSP's successfully gapped: 2
Length of query: 201
Length of database: 1,619,870
Length adjustment: 81
Effective length of query: 120
Effective length of database: 1,236,335
Effective search space: 148360200
Effective search space used: 148360200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 128 (53.9 bits)