BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0076.p
         (510 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311919|ref|YP_003776011.1| non-hemolytic phospholipase C (...   982   0.0  
gi|300310916|ref|YP_003775008.1| phospholipase C protein [Herbas...    77   2e-15

>gi|300311919|ref|YP_003776011.1| non-hemolytic phospholipase C
           (phosphatidylcholine choline phospho hydrolase) signal
           peptide protein [Herbaspirillum seropedicae SmR1]
          Length = 696

 Score =  982 bits (2538), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/505 (95%), Positives = 489/505 (96%)

Query: 1   MNRKSPGRRHFLKNAARTGSAALALTALPASIRKALAVAPSSPTGTIKDVKHVVILMQEN 60
           M RKS  RRHFLK+AARTGSAALALTALPASIRKALAVAP+SPTGTIKDVKHVVILMQEN
Sbjct: 1   MKRKSQDRRHFLKSAARTGSAALALTALPASIRKALAVAPASPTGTIKDVKHVVILMQEN 60

Query: 61  RSFDHYFGCLKGVRGFADPIPRPLPDGSPVFHQRDQQGRLVLPYRMEMATTSAGRAGGNL 120
           RSFDHYFGCL+GVRGFADPIPRPLPDGSPVFHQRD QGRLVLPYRMEMATTSAGRAGGNL
Sbjct: 61  RSFDHYFGCLRGVRGFADPIPRPLPDGSPVFHQRDGQGRLVLPYRMEMATTSAGRAGGNL 120

Query: 121 PHAWKDQHAAWNRGDYDKWIEAKKDTVTMAYFTREDLPFHYALADAFTICDAYHCSVLGS 180
           PHAWKDQHAAWNRGDYDKWIEAKKDTVTMAYFTREDLPFHYALADAFT+CDAYHCSVLGS
Sbjct: 121 PHAWKDQHAAWNRGDYDKWIEAKKDTVTMAYFTREDLPFHYALADAFTLCDAYHCSVLGS 180

Query: 181 TNPNRFHMMSGGIDLQGRAGGPMTFQPRTGSWSGVPGERRNGADSFRWTTYPERLEQHGV 240
           TNPNRFH+MSGGIDLQGRAGGPMTFQPRTGS SGVPGERR+GADSF WTTYPERLEQHGV
Sbjct: 181 TNPNRFHLMSGGIDLQGRAGGPMTFQPRTGSCSGVPGERRSGADSFGWTTYPERLEQHGV 240

Query: 241 SWKVYQGTDELHKDHGDYPSDFNVLQYFFAQYQNAAPDSPLWQKACSKFTLADLARDVNG 300
           SWKVYQGT+ELHKDHGDYPSDFNVLQYFFAQYQNAAPDSPLWQKACSKFTLADLARDVN 
Sbjct: 241 SWKVYQGTEELHKDHGDYPSDFNVLQYFFAQYQNAAPDSPLWQKACSKFTLADLARDVNS 300

Query: 301 GTLPQVSWLMPPKLSCEHPDRTPGYGAHYISQVLDILTANPALWSSTVLLVNYDENDGFF 360
           G LPQVSWLMPPKLSCEHPDRTPGYGAHYISQVLDILTANPALWSSTVLLVNYDENDGFF
Sbjct: 301 GKLPQVSWLMPPKLSCEHPDRTPGYGAHYISQVLDILTANPALWSSTVLLVNYDENDGFF 360

Query: 361 DHVAPPTPPLHGGQGQSTVEVSGEFHRLGDYVNPADDLPAGLGARVPMMVISPWSKGGYV 420
           DHV PPTPPLH GQG STVE S EFHR GDYVNPADDLPAGLGARVPMMVISPWSKGGYV
Sbjct: 361 DHVVPPTPPLHAGQGLSTVETSAEFHRKGDYVNPADDLPAGLGARVPMMVISPWSKGGYV 420

Query: 421 CSEVFDHTSVIRFLEQIFDVHEPNISPWRRAVCGDLTSAFDFSRRDVASPVLPDTSAYRA 480
           CSEVFDHTSVIRFLEQ+FDVHEPNISPWRRAVCGDLTSAFDFSRRD ASPVLPDTSAYRA
Sbjct: 421 CSEVFDHTSVIRFLEQVFDVHEPNISPWRRAVCGDLTSAFDFSRRDAASPVLPDTSAYRA 480

Query: 481 LSDAQARLPAPVAPASPMMPQQERG 505
           LSDAQARLPAPVAP+SP MPQQERG
Sbjct: 481 LSDAQARLPAPVAPSSPAMPQQERG 505


>gi|300310916|ref|YP_003775008.1| phospholipase C protein
           [Herbaspirillum seropedicae SmR1]
          Length = 558

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 44/224 (19%)

Query: 233 ERLEQHGVSWKVY----QGTDELHKDHGDYPS--DFNVLQYFFAQYQNAAPDSPLWQ-KA 285
           ++L + G+ W  Y    Q T +  KD    P   +F      F  ++N  P++P  + K 
Sbjct: 335 DKLNKKGIDWAWYAGAWQATLDEFKDSKGIPKIPNFQYHHQPFNYFKNLGPENPAERNKR 394

Query: 286 CSKFTLADLAR------DVNGGTLPQVSWLMPP-KLSCEHPDRTPGYGAHYISQVLDILT 338
                L D AR      DV  G LP V++  P   L+          G  +I+ ++  L 
Sbjct: 395 LRDGGLGDEARTNRFLADVEAGRLPPVTFYKPQGNLNLHAGYADIASGDRHIAHIIKSLQ 454

Query: 339 ANPALWSSTVLLVNYDENDGFFDHVAPPTPPLHGGQGQSTVEVSGEFHRLGDYVNPADDL 398
           A+P  W + V++V +DEN G++DHVAPP                      GD   P    
Sbjct: 455 ASPQ-WKNMVVVVTFDENGGWWDHVAPPK---------------------GDRWGP---- 488

Query: 399 PAGLGARVPMMVISPWSKGGYVCSEVFDHTSVIRFLEQIFDVHE 442
               G RVP +V+SP+++ G V   V+D  S++R + + FD+ +
Sbjct: 489 ----GTRVPALVVSPFARKGTVDHTVYDTASILRLITRTFDLEK 528


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.320    0.136    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,827,101
Number of extensions: 85951
Number of successful extensions: 182
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 182
Number of HSP's successfully gapped: 2
Length of query: 510
Length of database: 1,619,870
Length adjustment: 89
Effective length of query: 421
Effective length of database: 1,198,455
Effective search space: 504549555
Effective search space used: 504549555
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 133 (55.8 bits)