BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0041.p (1156 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300311948|ref|YP_003776040.1| sensor histidine kinase/respons... 2150 0.0 gi|300312677|ref|YP_003776769.1| two component hybrid sensor his... 191 4e-49 gi|300313023|ref|YP_003777115.1| hypothetical protein Hsero_3729... 184 3e-47 gi|300310697|ref|YP_003774789.1| two component hybrid sensor his... 171 3e-43 gi|300313029|ref|YP_003777121.1| two component hybrid sensor his... 167 4e-42 >gi|300311948|ref|YP_003776040.1| sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] Length = 1145 Score = 2150 bits (5572), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1079/1156 (93%), Positives = 1106/1156 (95%), Gaps = 11/1156 (0%) Query: 1 VTHPATQRIVKVRRDYNTWVANETLEDYALRYTPLSFRRWSEFRLANTALGATSFLALEA 60 +THPATQRIVKVRRDYNTWVANETLEDYALRYTPLSFRRWSEFRLANTALGATSFLALEA Sbjct: 1 MTHPATQRIVKVRRDYNTWVANETLEDYALRYTPLSFRRWSEFRLANTALGATSFLALEA 60 Query: 61 ISGAITLSYGFTNAFWAIICVMVLFFATGLPISYYAARYGVDMDLLTRGAGFGYIGSTIT 120 ISGAITLSYGFTNAFWAI CV++LFF TGLPI YYAARYGVDMDLLTRGAGFGYIGSTIT Sbjct: 61 ISGAITLSYGFTNAFWAIACVVLLFFLTGLPICYYAARYGVDMDLLTRGAGFGYIGSTIT 120 Query: 121 SLIYASFTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCSLIIIPMVAYGITLINRLQMWT 180 SLIYASFTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCS+IIIPMVAYGITLINRLQMWT Sbjct: 121 SLIYASFTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCSIIIIPMVAYGITLINRLQMWT 180 Query: 181 QPLWLVLLVLPYACVLYKEPEALSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQVGE 240 QPLWLVLLVLPY CVLYKEP+ALSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQVGE Sbjct: 181 QPLWLVLLVLPYVCVLYKEPDALSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQVGE 240 Query: 241 QVDFLRFLPQKTAANRGRWWSALLLAGPGXTHPAGPGWILLGGAKMLGGTLLAFLAIQHE 300 QVDFLRFLPQKT ANRGRWWSALLLAGPG WILLGGAKMLGG LLAFLAIQHE Sbjct: 241 QVDFLRFLPQKTPANRGRWWSALLLAGPG--------WILLGGAKMLGGALLAFLAIQHE 292 Query: 301 VPMARAVEPTQMYLIGYQYVFGNPAFALGAVVLFVVVSQIKINVTNAYAGSLAWSNFFAR 360 VPMARAVEPTQMYL+GYQYVFGNPA ALGAVVLFVVVSQIKINVTNAYAGSLAWSNFFAR Sbjct: 293 VPMARAVEPTQMYLVGYQYVFGNPALALGAVVLFVVVSQIKINVTNAYAGSLAWSNFFAR 352 Query: 361 LTHSHPGRVVWLVFNVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVVADLVINKPLR 420 LTHSHPGRVVWLVFNVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVVADLVINKPLR Sbjct: 353 LTHSHPGRVVWLVFNVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVVADLVINKPLR 412 Query: 421 LSPAHIEFKRAHLYDVNPVGVGSMVIATLLSTLAMSGVLGKTIAAMAPFIALGTALVTAP 480 LSPAHIEFKRAHLYDVNPVGVG+M IATLLSTLAMSGVLGKT+AAMAPFIALGTAL +AP Sbjct: 413 LSPAHIEFKRAHLYDVNPVGVGAMAIATLLSTLAMSGVLGKTVAAMAPFIALGTALASAP 472 Query: 481 LIALATGSRYYIARRDTLSEQNYRPVTPGQAHSVLDCVICGNAFETPDMAHCPAYQGAIC 540 LIALATGSRYYIARRDTL+EQNYRPVTPGQA VL C ICGNAFETPDMAHCPAYQGAIC Sbjct: 473 LIALATGSRYYIARRDTLAEQNYRPVTPGQAQPVLACAICGNAFETPDMAHCPAYQGAIC 532 Query: 541 SLCCSLDARCKDRCKTPRARLPNQILHTLRQLIPARFALKLNTRIGHYLSVFGLLAGGLA 600 SLCCSLDARCKDRCKTPRARLPNQILHTLRQLIPARFA+KLNTRIGHYLSVFGLLAGGLA Sbjct: 533 SLCCSLDARCKDRCKTPRARLPNQILHTLRQLIPARFAVKLNTRIGHYLSVFGLLAGGLA 592 Query: 601 IVLWMLYFQQMADLSGLSLSAPDSLRGVFIKLFCLLLVVVGVGAWWLVLTNESRAVAQEE 660 +VLWMLYFQQMADLSG L AP SLR VFIKLFCLLLVVVGVGAWWLVLTNESRAVAQEE Sbjct: 593 VVLWMLYFQQMADLSGSGLDAPASLRSVFIKLFCLLLVVVGVGAWWLVLTNESRAVAQEE 652 Query: 661 SERQTNLLLQEIEAHKQTDAELQRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQI 720 SERQTNLLLQEIEAHKQTDAELQRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQI Sbjct: 653 SERQTNLLLQEIEAHKQTDAELQRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQI 712 Query: 721 LHVDATIPPARKEAIAIIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQIV 780 LHVDATIPPARK+AI +IRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQIV Sbjct: 713 LHVDATIPPARKDAIGVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQIV 772 Query: 781 GMFAPQAEQKGLHFRFEKSGRLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTLKLRYA 840 GMFAPQAEQKGLHFRF+KSGRLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTL+LRYA Sbjct: 773 GMFAPQAEQKGLHFRFDKSGRLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTLRLRYA 832 Query: 841 REIAYFDVIDSGIGIADEDLERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMGGELS 900 REIAYFDVID+GIGIAD+D ERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMGGELS Sbjct: 833 REIAYFDVIDTGIGIADDDRERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMGGELS 892 Query: 901 VQSRVGHGSSFHLKIYLPEVHVPRPRIKLEDQMSGYTGPSRHILVVDDQASQRRLLKDML 960 VQS+VG GSSFHLKIYLPEVHVPRPRIKLEDQMSGY GPSRHILVVDDQASQRRLLKDML Sbjct: 893 VQSQVGQGSSFHLKIYLPEVHVPRPRIKLEDQMSGYAGPSRHILVVDDQASQRRLLKDML 952 Query: 961 MPLGFVVSEADSGLACMERLGREVPDLILLDIAMPQMDGWTVARAIRARGLAQLPILLVS 1020 MPLGF VSEADSGLACME LG +PDL+LLDIAMPQMDGW+VARAIRARGLAQLPILLVS Sbjct: 953 MPLGFTVSEADSGLACMETLGHALPDLVLLDIAMPQMDGWSVARAIRARGLAQLPILLVS 1012 Query: 1021 ANAFENLHERNEPPLVNDFVVKPVSYHELLGKIRQHLQLDWVASILPPVPAEVPPTPAAP 1080 ANAFENLHERNEPPLVNDFVVKPVSYHELLGKIRQHLQLDWVA+ P AP Sbjct: 1013 ANAFENLHERNEPPLVNDFVVKPVSYHELLGKIRQHLQLDWVAAA---DAPTPAAPPPAP 1069 Query: 1081 QALMLVPPQDKLAALLELGSIGYAKEILRQLDAMERQQPAYLPFTTELRQLVKQFRLNEY 1140 QALMLVP Q+KLA LLELGSIGYAKEI+RQLDA+ERQ PAYLPFTTELRQLV+QFRLNEY Sbjct: 1070 QALMLVPTQEKLATLLELGSIGYAKEIVRQLDALERQDPAYLPFTTELRQLVRQFRLNEY 1129 Query: 1141 VTRIKELIRHDLNDVR 1156 VTRIKELIRHDLNDVR Sbjct: 1130 VTRIKELIRHDLNDVR 1145 >gi|300312677|ref|YP_003776769.1| two component hybrid sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] Length = 1160 Score = 191 bits (484), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 151/447 (33%), Positives = 225/447 (50%), Gaps = 61/447 (13%) Query: 662 ERQTNLL-LQEIEAHKQTDAELQRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQI 720 E QT LL LQ+ + K +++A E E AN KS F+A MSHELRTPLNS L A++ Sbjct: 441 EEQTQLLELQKDDLAKTQVVLVEKATEL-ERANQYKSEFLANMSHELRTPLNSTLILAKL 499 Query: 721 L--HVDATIPPARKEAIAIIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQ 778 L + + + I +G LL+LI+ +LD++K+EAGK+ + + L ++ Sbjct: 500 LADNKQGNLSDEQVRFAQTISSAGNDLLALINDILDLSKMEAGKLDIVPESFPLTKLADE 559 Query: 779 IVGMFAPQAEQKGLHFRFEKSGRLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTLKL- 837 + FA A+QKGL F+ E +PQ + D +RL QIL NLL NA+KFT+ G V+L++ Sbjct: 560 LSASFAITAQQKGLGFKVEVEPGVPQRMETDIQRLGQILKNLLSNAIKFTEKGEVSLRIY 619 Query: 838 -RYAREIAYFDVIDSGIGIADEDLERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMG 896 IA F V D+GIGI ++ + IF F ++ + R+ GTGLGL+ISR L H++G Sbjct: 620 PDAGGRIA-FAVRDTGIGIGEDQHQFIFEAFRQADGSTHRKYGGTGLGLSISRDLAHLLG 678 Query: 897 GELSVQSRVGHGSSFHLKI----------------------------------YLPEVHV 922 G++ V SR+G GS F L + P+V + Sbjct: 679 GDIRVTSRLGEGSIFTLSLPPLYSSEQAVSNTAPEPTPAAAAAASTLQAAHVATAPDVRI 738 Query: 923 PR----------PRIKLEDQMSGYTGPSRHILVVDDQASQRRLLKDMLMPLGF---VVSE 969 R I ++D SR ILV++D A+ +L+D+ +GF V Sbjct: 739 NRTPAAAAPQRLQEISIDDDRDRIETSSRLILVIEDDAAFAMILRDLAREMGFQCVVTHS 798 Query: 970 ADSGLACMERLGREVPDLILLDIAMPQMDGWTVARAI-RARGLAQLPILLVSANAFENLH 1028 A+ G+A E P IL+D+ +P G V I R +P+ +VS + H Sbjct: 799 ANEGVAAAEMY---RPSAILMDMNLPDFSGLGVLDQIKRNPKTRHIPVHVVSVADYS--H 853 Query: 1029 ERNEPPLVNDFVVKPVSYHELLGKIRQ 1055 E E + + +KPV EL+G IR+ Sbjct: 854 EAMERGAIG-YALKPVQREELIGAIRK 879 Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 43/121 (35%), Positives = 66/121 (54%), Gaps = 7/121 (5%) Query: 941 RHILVVDDQASQRRLLKDMLMPLGFVVSEADSGLACMERLGR-----EVP-DLILLDIAM 994 R ILVV+D L +L P G V A +G ++ L R + P DL+L+DI M Sbjct: 1035 RRILVVEDDVRNIFALSSVLEPKGMKVEIARNGREALQALQRSQDKPDAPIDLVLMDIMM 1094 Query: 995 PQMDGWTVARAIRARGL-AQLPILLVSANAFENLHERNEPPLVNDFVVKPVSYHELLGKI 1053 P+MDG T R IR + + +LPI+ ++A A ++ E+ ND++ KP+ +LL + Sbjct: 1095 PEMDGLTAMREIRKQAVWKRLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVEKLLSLV 1154 Query: 1054 R 1054 R Sbjct: 1155 R 1155 >gi|300313023|ref|YP_003777115.1| hypothetical protein Hsero_3729 [Herbaspirillum seropedicae SmR1] Length = 765 Score = 184 bits (468), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 136/439 (30%), Positives = 217/439 (49%), Gaps = 56/439 (12%) Query: 675 HKQTDAEL-QRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIPPARKE 733 ++ DA L R KE A+ AN AKS F+A +SHE+RTP+N ILG +++L R Sbjct: 326 RREEDALLATRLKEEADHANEAKSHFLAMVSHEIRTPMNGILGLSELLMESGLSSKQRDY 385 Query: 734 AIAIIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQKGLH 793 A +I +G L+ +I+ +LD +KIE+GK+ L ++++ ++ P ++K + Sbjct: 386 ADSIHGATG-GLVRIINDILDFSKIESGKLDLEMVAFHPVRLVQELSDLYRPSLQRKDVQ 444 Query: 794 FRFEKSGRLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTLKLRYAREIA-------YF 846 F V D RL+Q+L NLL NA+KFT G V L + ++ + +F Sbjct: 445 FDLHLDCPENLSVVGDPARLKQVLGNLLSNAIKFTQAGHVQLSMSARQDESGPSRWRLFF 504 Query: 847 DVIDSGIGIADEDLERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMGGELSVQSRVG 906 + D+GIGI+ E L+++F PF ++ ++ R GTGLGLAIS+ LV +MGG ++ QS G Sbjct: 505 AITDTGIGISPEALQQLFRPFAQADSSISRRFGGTGLGLAISKNLVELMGGTIACQSIPG 564 Query: 907 HGSSFHLKIYLPEVHVPR---------------------------------------PRI 927 + F +I PE P P+ Sbjct: 565 ESTRFSFEILCPEASTPAPEPVSEAAAPAPATALATTAPALPPAAEAPGTLMPPDNAPQP 624 Query: 928 KLEDQMSGYTGPS----RHILVVDDQASQRRLLKDMLMPLGFVVSEADSGLACMERLGRE 983 S PS IL+ +D R+LL+ +L G ++ E ++GL +E + Sbjct: 625 PSNVDASATVLPSLLAGARILMAEDTEINRQLLRILLARKGCILQEVENGLQAVEAIRTG 684 Query: 984 VPDLILLDIAMPQMDGWTVARAIR----ARGLAQLPILLVSANAFENLHERNEPPLVNDF 1039 DL+L+D MP MDG+ IR ARGL + PI+ ++A+A E +R ++D+ Sbjct: 685 HYDLVLMDCMMPIMDGYQATAEIRAHEAARGLPRTPIIALTASAIEGDRQRCLDAGMDDY 744 Query: 1040 VVKPVSYHELLGKIRQHLQ 1058 + KP + L+ + + LQ Sbjct: 745 LSKPFTQVGLMQTVEKWLQ 763 >gi|300310697|ref|YP_003774789.1| two component hybrid sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] Length = 916 Score = 171 bits (433), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 151/480 (31%), Positives = 241/480 (50%), Gaps = 42/480 (8%) Query: 681 ELQRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIPPARKEAIAIIRR 740 EL++A +AA+ ANLAKS F+ +SH+LRTPL SILG+A ++ II R Sbjct: 436 ELRQALQAADEANLAKSGFLTRISHDLRTPLTSILGFADMIQASGGPHAGHGR---IIMR 492 Query: 741 SGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQKGLHFRFEKSG 800 S H+L++++ L+D A+ + + L L A L++I A+++ HF + S Sbjct: 493 SARHMLTMVNDLIDYARGDPLDTPQPT-PLYLHALLQEIAQEGQVLAQRQHNHFTLDISP 551 Query: 801 RLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTLKLRYAREIA-------YFDVIDSGI 853 LP ++ D +RL +IL NLL NA K+T G + L +++ + A +V D+G Sbjct: 552 DLPPVLALDARRLHRILGNLLDNAAKYTREGRIGLHVQWQADHADAGKGALQIEVSDTGC 611 Query: 854 GIADEDLERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMGGELSVQSRVGHGSSFHL 913 GIA + RIF PFER+ A R G G+GLAI R+ V MGG + ++S+ G G+ HL Sbjct: 612 GIAPQFQSRIFEPFERADAD--RRQPGIGMGLAIVRLWVQRMGGSIVLESQPGMGTRMHL 669 Query: 914 KIYLPEVHVPRPRIKLEDQMSGYT-----------GPSRHILVVDDQASQRRLLKDMLMP 962 ++ P R +D S + G R ++VV+D RLL D L Sbjct: 670 QL-------PAERGSEQDIASHHVQEHSSTRVLIDGAGRQVVVVEDSPEIARLLSDQLSS 722 Query: 963 LGFVVS---EADSGLACMERL--GREVPDLILLDIAMPQMDGWTVARAIRARGLAQLPIL 1017 LGF VS + ++ +A + L +E P L+L D +P + G V +A R R L ++P+L Sbjct: 723 LGFAVSVFGDGETAIAHLSALTMDQEAPALVLTDYLLPGVHGGAVLQAAR-RLLPEVPVL 781 Query: 1018 LVSANAFENLHERNEPPLVNDFVVKPVSYHELLGKIRQHLQLDWVASILPPVPAEVPPTP 1077 L+SA E + + ++KPV++ EL I Q LQL L A + Sbjct: 782 LLSATLHACEVELDGDLRFDGSLLKPVNFSELQEMIAQLLQLP-----LLGSTASSASSG 836 Query: 1078 AAPQALMLVPPQDKLAALLELGSIGYAKEILRQLDAMERQQPAYLPFTTELRQLVKQFRL 1137 + ++ +PP+ L A L + + G +++ + + + P F + + + Q L Sbjct: 837 GSVGEVVAMPPEALLQAALAMIADGAVSDLIDWCETLGHEHPQCSQFQAQALEQISQGHL 896 >gi|300313029|ref|YP_003777121.1| two component hybrid sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] Length = 1524 Score = 167 bits (423), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 152/444 (34%), Positives = 225/444 (50%), Gaps = 59/444 (13%) Query: 685 AKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIP-PARKEAIAIIRRSGE 743 A+ AE AN AKS F+A +SHE+RTP+N +LG Q+L T P PA+++ + S + Sbjct: 886 ARLKAEQANSAKSLFLASVSHEIRTPMNGVLGMIQLLQ--RTQPLPAQQDYLDKAEISAK 943 Query: 744 HLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQKGLHFRFEKSGRLP 803 LL+L++ LLD +K++A +++L LE F + + A Q G+ +LP Sbjct: 944 SLLNLLNDLLDFSKMDAKQLQLDLQAFELERFGHNLAAVLAGSPPQAGVSLHIALDPQLP 1003 Query: 804 QIVHADQKRLRQILINLLGNAVKFTDHGGVTLKLRY-----AREIA-YFDVIDSGIGIAD 857 + + D RL+Q+L+NL GNA+KFT G + + R +A +V D+GIGIA Sbjct: 1004 RRLVGDAHRLQQVLVNLTGNALKFTHQGHIDVHFTRLDPLPGRTVALRVEVSDTGIGIAA 1063 Query: 858 EDLERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMGGELSVQSRVGHGSS--FHLKI 915 + L+ IF F ++ A+ R GTGLGLAIS+ LV +MGG+L V S G GS F L++ Sbjct: 1064 DRLDDIFDAFTQAEASTTRRYGGTGLGLAISKHLVGLMGGQLQVSSEPGRGSRFWFDLQL 1123 Query: 916 YLPEVHVPRPRIKLED------QMSGYTGPSR-----------------HILVVDDQASQ 952 + + V P + Q + +T SR IL+V+D Sbjct: 1124 AVDDDSVLGPAAADDAARPQPLQAASHTAGSRAPETARSAPDAQCLQGVQILLVEDNPVN 1183 Query: 953 RRLLKDMLMPLGFVVSEADSG-----LACMERLGREVPDLILLDIAMPQMDGWTVARAIR 1007 R++ ++L G V+ ADSG +AC R DL+L+D+ MP MDG R IR Sbjct: 1184 RQVASELLALSGAQVTCADSGSMGVAMACDP--ARHF-DLVLMDLQMPGMDGIEATRRIR 1240 Query: 1008 AR-GLAQLPILLVSANAFENLHERNEPPLVNDFVVKPVSYHELLGKIRQHLQLDWVASIL 1066 + L LPIL ++ANA +R + + KP+ L+ + HL + Sbjct: 1241 GQYELRGLPILAMTANASPEDKQRCIEAGMAGHIAKPIDIATLIPVLLAHLHHER----- 1295 Query: 1067 PPVPAEVPPTPAAPQALMLVPPQD 1090 PVP AAPQA+ PQD Sbjct: 1296 -PVPE------AAPQAV----PQD 1308 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.325 0.139 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 3,394,720 Number of extensions: 140200 Number of successful extensions: 861 Number of sequences better than 1.0e-08: 55 Number of HSP's gapped: 803 Number of HSP's successfully gapped: 58 Length of query: 1156 Length of database: 1,619,870 Length adjustment: 96 Effective length of query: 1060 Effective length of database: 1,165,310 Effective search space: 1235228600 Effective search space used: 1235228600 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 136 (57.0 bits)