BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0018.p
         (893 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311968|ref|YP_003776060.1| Mg-chelatase subunit ChlI prote...   917   0.0  
gi|300311967|ref|YP_003776059.1| precorrin-6y methylase methyltr...   487   e-138

>gi|300311968|ref|YP_003776060.1| Mg-chelatase subunit ChlI protein
           [Herbaspirillum seropedicae SmR1]
          Length = 663

 Score =  917 bits (2370), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/652 (78%), Positives = 549/652 (84%), Gaps = 41/652 (6%)

Query: 1   MTAFNAYPFAAIVGQPLLKQALLLCAVDPGIGGVLVRGDKGTAKSTAARGLTQVLPPIIL 60
           MTA   YPF+AIVGQPLL+QALLLCAVDPGIGGVLVRGDKGTAKSTAARGLTQVLPPI  
Sbjct: 1   MTALPVYPFSAIVGQPLLQQALLLCAVDPGIGGVLVRGDKGTAKSTAARGLTQVLPPIAR 60

Query: 61  SEGCAFHCAPGHPASACTVCNTDPVQRQDT--VPFVTLPLGATEDRVLGSLDLQQALQGG 118
              CAF+CAPG PA+ACT+CN D         +PFVTLPLGATEDRVLGSLDLQQALQGG
Sbjct: 61  VAACAFNCAPGQPAAACTLCNGDNAPAAAPADLPFVTLPLGATEDRVLGSLDLQQALQGG 120

Query: 119 QRAFQPGLLAAAHRGILYIDEVNLLADHLVDVLLDVAAMGVNSVQREGISISHPARFTLI 178
           QRAFQPGLLAAAHRGILYIDEVNLLADHLVDVLLDVAAMG+N+VQREG+S+SHPARFTLI
Sbjct: 121 QRAFQPGLLAAAHRGILYIDEVNLLADHLVDVLLDVAAMGINAVQREGLSVSHPARFTLI 180

Query: 179 GTMNLEEGDLRPQLLDRFGLMVEVSAPTDKTVRAEVVRRRIAFETDPAAFAQRWQPQQDA 238
           GTMNLEEGDLRPQLLDRFGLMVEV+APTDKTVRAEVVRRRIAFE DPAAFA +WQ +QDA
Sbjct: 181 GTMNLEEGDLRPQLLDRFGLMVEVNAPTDKTVRAEVVRRRIAFEADPAAFASQWQDRQDA 240

Query: 239 LLAQVAEAQRLLPDVVLDDAMLELISHLCCEFEVASLRADIVMHKTARAIAALQARTRVT 298
           L  QVA+AQRLLP+VVLDDAMLELISHLCCEFEVASLRADIVMHKTARAIAALQAR+RVT
Sbjct: 241 LRNQVAQAQRLLPEVVLDDAMLELISHLCCEFEVASLRADIVMHKTARAIAALQARSRVT 300

Query: 299 PDDVREAALLVLPHRRRRKPFEQTGMDEDKLDDLVDLARQPEPPPPQAEHGDTRGEDAEE 358
           PDDVREAALLVLPHRRRRKPFEQTGMD+DKLDDL+D AR PEPP P A      GE + E
Sbjct: 301 PDDVREAALLVLPHRRRRKPFEQTGMDQDKLDDLIDQARTPEPPAPDA------GEGSGE 354

Query: 359 TPPSDEPQ-----------QEEEQEGE-GGQQTFAVAAAGTARRISVAATPQAAANAASG 406
            PP  EP             +++Q  E GGQQTFA+AAAG AR+ISVAA   A A+AASG
Sbjct: 355 APPQ-EPSPEQEQPEEGEQDQQDQPSEAGGQQTFAIAAAGQARKISVAAP--AQASAASG 411

Query: 407 RRSAVADANRGNAVRAVPDANPDRLAIGATLRSAAVRGALAGETD--GPLTVTRDDLHRQ 464
           RRSAVADA+RG+AVRAVPDANPDRLAIGATLRSAAVR AL+GE +    L V+R DLHRQ
Sbjct: 412 RRSAVADASRGSAVRAVPDANPDRLAIGATLRSAAVRSALSGEAEPGERLAVSRADLHRQ 471

Query: 465 VRSGRGANLIVFVVDASGSMAAQRRMEAVKGAVLALLTDAYQRRDQLAVIAFRGEQAQLL 524
           VRSGRGANLIVFVVDASGSMAAQRRMEAVKGAVLALLTDAYQRRDQLAVIAFRGEQAQLL
Sbjct: 472 VRSGRGANLIVFVVDASGSMAAQRRMEAVKGAVLALLTDAYQRRDQLAVIAFRGEQAQLL 531

Query: 525 LAPTRSADLAEQGLRELPTGGPPPPPPPRRDAAGDAGGGGGGGAAQVLQQAAQQSAQEAP 584
           LAPTRSADLAEQGLRELPTGG  P P                 A Q+  Q  QQ++ EAP
Sbjct: 532 LAPTRSADLAEQGLRELPTGGRTPLP----------------HALQLAAQVLQQASPEAP 575

Query: 585 PLLVILSDGKANVSLPGSSGDPWTETLQAAQTLAAQGVPALVLDTEAGYFTF 636
           PLLVILSDGKANVSLPGS GD W +TL+AA  LAAQ VPALVLDTE+GY   
Sbjct: 576 PLLVILSDGKANVSLPGSHGDAWAQTLEAADMLAAQAVPALVLDTESGYLRL 627


>gi|300311967|ref|YP_003776059.1| precorrin-6y methylase
           methyltransferase [Herbaspirillum seropedicae SmR1]
          Length = 241

 Score =  487 bits (1253), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 230/241 (95%), Positives = 235/241 (97%)

Query: 653 MIICIGAGPGDHSYLTMRGAELIRNADVVAGFNAVVDVVKDLIPASAQVVLMGYRDQVAK 712
           MIICIGAGPGDHSYLT+RGAELIRNADVVAGFNAVVDVVKDLIPASAQVVLMGYRDQVAK
Sbjct: 1   MIICIGAGPGDHSYLTLRGAELIRNADVVAGFNAVVDVVKDLIPASAQVVLMGYRDQVAK 60

Query: 713 LDEVAALHHAGKRCVVVFMGDIHFSGFQYLERVERACGHRVETLPGISSAQILASKARVC 772
           LDEVAALHHAGKRCVVVFMGDIHFSGFQYLERVERACGHRVETLPGISSAQILASKARVC
Sbjct: 61  LDEVAALHHAGKRCVVVFMGDIHFSGFQYLERVERACGHRVETLPGISSAQILASKARVC 120

Query: 773 FDETTFITFHRRGDLEPFKRHLVNVLNDGRNAIVIPCPWDAARSFMPRHIATYLLQQGVN 832
           FDETTFITFHRRGDLEPFKRHLV+VLNDGRNAIVIPCPWDAARSFMPRHIATYLLQQGV+
Sbjct: 121 FDETTFITFHRRGDLEPFKRHLVHVLNDGRNAIVIPCPWDAARSFMPRHIATYLLQQGVS 180

Query: 833 PEHPTEVWENLTRGDAEWHGKLADCADKEFSDMSIMLIRTLTPMDSQIEPPPEKVAAGAP 892
           PEHPTEVWENLTRGDAEWHGKLADCA+ EFSDMSIMLIRTLTPM SQIEPPP   A+GA 
Sbjct: 181 PEHPTEVWENLTRGDAEWHGKLADCAEVEFSDMSIMLIRTLTPMASQIEPPPAMTASGAS 240

Query: 893 A 893
           A
Sbjct: 241 A 241


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.319    0.134    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 2,485,188
Number of extensions: 96805
Number of successful extensions: 372
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 367
Number of HSP's successfully gapped: 2
Length of query: 893
Length of database: 1,619,870
Length adjustment: 94
Effective length of query: 799
Effective length of database: 1,174,780
Effective search space: 938649220
Effective search space used: 938649220
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 135 (56.6 bits)