BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0028.0323.p
         (272 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311050|ref|YP_003775142.1| esterase_lipase superfamily pro...   386   e-108
gi|300310635|ref|YP_003774727.1| 3-ketoadipate enol-lactone hydr...    73   2e-14

>gi|300311050|ref|YP_003775142.1| esterase_lipase superfamily
           protein [Herbaspirillum seropedicae SmR1]
          Length = 251

 Score =  386 bits (991), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 206/245 (84%), Positives = 217/245 (88%)

Query: 1   MAFALSDHRKIHYQIEGNGPPLLLHHGFTSSLEAWRFFGFTAVLREHFQVIHFDALGHGQ 60
           M FA+SD RKIHYQ+EG GPPLLLHHGFTSSLEAWRFFGFT VLR+H++VI FDALGHGQ
Sbjct: 1   MPFAISDQRKIHYQVEGEGPPLLLHHGFTSSLEAWRFFGFTDVLRQHYRVISFDALGHGQ 60

Query: 61  SDKPHDPAAYTQVQRCRDALAVLDAAGIERAHFFGYSLGGWVGYGLVRHAPQRLHSLILG 120
           SDKPHD AAY+Q QRCRDALAVLDAA +ER HFFGYSLGGWVGYGLVR AP+RL SLILG
Sbjct: 61  SDKPHDSAAYSQHQRCRDALAVLDAAQVERTHFFGYSLGGWVGYGLVRQAPERLRSLILG 120

Query: 121 AAHPYEDRSWDGFHGIDGRDPEAFIATFEGLLDEQISPQVKMLIRANDLVALAAAAQQPR 180
           AAHPYEDRSW+ F GIDG DPEAFIA FE LLDE ISPQVKMLIR NDLVALAAAAQQ R
Sbjct: 121 AAHPYEDRSWEVFRGIDGTDPEAFIAAFEDLLDEAISPQVKMLIRGNDLVALAAAAQQAR 180

Query: 181 PSQEDLLPRMDLPCLLFCGDADARHAAVQRTAALLPQGEFVSLPGVTHFGGLMQSALVLP 240
           PSQE+LL RMDLPCL FCGDADARH AV RTAA L + EFVSLPGVTHFGGLMQSALVLP
Sbjct: 181 PSQEELLARMDLPCLFFCGDADARHTAVARTAARLARAEFVSLPGVTHFGGLMQSALVLP 240

Query: 241 HVLRF 245
            VL F
Sbjct: 241 PVLDF 245


>gi|300310635|ref|YP_003774727.1| 3-ketoadipate enol-lactone
           hydrolase [Herbaspirillum seropedicae SmR1]
          Length = 261

 Score = 73.2 bits (178), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 70/137 (51%), Gaps = 13/137 (9%)

Query: 1   MAFALSDHRKIHYQIEGNG--PPLLLHHGFTSSLEAWRFFGFTAVLREHFQVIHFDALGH 58
           M FA  +  ++HYQ+EG+   P L+L +   +SL  W          +HF+V+ +D  GH
Sbjct: 1   MPFANVNAIRLHYQLEGDASLPVLVLSNSLGTSLSMWD--PQMPQWLQHFRVLRYDTRGH 58

Query: 59  GQSDKPHDPAAYTQVQRCRDALAVLDAAGIERAHFFGYSLGGWVGYGLVRHAPQRLHSLI 118
           GQS+    P   +  Q   D +A+LD  GI +AHF G S+GG     L  H PQR++ LI
Sbjct: 59  GQSEV--TPGECSIAQLGSDVIALLDHLGIAQAHFCGLSMGGSTFMWLAVHHPQRINKLI 116

Query: 119 L-------GAAHPYEDR 128
           L       G A  +  R
Sbjct: 117 LCNTGAKIGTAEAWNSR 133


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.325    0.140    0.449 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 927,619
Number of extensions: 41205
Number of successful extensions: 143
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 144
Number of HSP's successfully gapped: 2
Length of query: 272
Length of database: 1,619,870
Length adjustment: 84
Effective length of query: 188
Effective length of database: 1,222,130
Effective search space: 229760440
Effective search space used: 229760440
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 130 (54.7 bits)