BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0028.0321.p
         (286 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311052|ref|YP_003775144.1| inositol monophosphatase [Herba...   540   e-155

>gi|300311052|ref|YP_003775144.1| inositol monophosphatase
           [Herbaspirillum seropedicae SmR1]
          Length = 265

 Score =  540 bits (1391), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 264/265 (99%), Positives = 264/265 (99%)

Query: 22  MIIPPMLNTAIKAARRAATIINRASFDVSLLKVSKKSHNDFVTEVDKAAEDAIIDVLKNA 81
           MIIPPMLNTAIKAARRAATIINRASFDVSLLKVSKKSHNDFVTEVDKAAEDAIIDVLKNA
Sbjct: 1   MIIPPMLNTAIKAARRAATIINRASFDVSLLKVSKKSHNDFVTEVDKAAEDAIIDVLKNA 60

Query: 82  YPDHAILAEESGASDNLHDENENVWIIDPLDGTTNFIHGFPQYCVSIALQQRGIITQAVV 141
           YPDHAILAEESGASDNLHDENENVWIIDPLDGTTNFIHGFPQYCVSIALQQRGIITQAVV
Sbjct: 61  YPDHAILAEESGASDNLHDENENVWIIDPLDGTTNFIHGFPQYCVSIALQQRGIITQAVV 120

Query: 142 YDPTRNDLFTASKGAGAYLNEKRIRVGKRDKIADALIGTGFPFRDLDGLNEYVKMFKVMT 201
           YDPTRNDLFTASKGAGAYLNEKRIRVGKRDKIADALIGTGFPFRDLDGLNEYVKMFKVMT
Sbjct: 121 YDPTRNDLFTASKGAGAYLNEKRIRVGKRDKIADALIGTGFPFRDLDGLNEYVKMFKVMT 180

Query: 202 EHSAGLRRPGAAALDLAYVAAGRLDGFFEKGLKPWDIAAGSLLVTEAGGIVGTFKGDSDY 261
           EHSAGLRRPGAAALDLAYVAAGRLDGFFEKGLKPWDIAAGSLLVTEAGGIVGTFKGDSDY
Sbjct: 181 EHSAGLRRPGAAALDLAYVAAGRLDGFFEKGLKPWDIAAGSLLVTEAGGIVGTFKGDSDY 240

Query: 262 LYKGDVIAGSPKIFAQQVNLLSEFA 286
           LYKGDVIA SPKIFAQQVNLLSEFA
Sbjct: 241 LYKGDVIAASPKIFAQQVNLLSEFA 265


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.320    0.137    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 821,715
Number of extensions: 32505
Number of successful extensions: 103
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 103
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 1,619,870
Length adjustment: 84
Effective length of query: 202
Effective length of database: 1,222,130
Effective search space: 246870260
Effective search space used: 246870260
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 130 (54.7 bits)